RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 MAFFQ9ULX9 164 aa10.66□□□□□ -0.7
VAPB-204ENST00000475243 MYH7BA7E2Y1 1941 aa10.66□□□□□ -0.7
VAPB-204ENST00000475243 CAPN14A8MX76 684 aa10.66□□□□□ -0.7
VAPB-204ENST00000475243 UPK3BL1B0FP48 263 aa10.66□□□□□ -0.7
VAPB-204ENST00000475243 UPK3BL2E5RIL1 263 aa10.66□□□□□ -0.7
VAPB-204ENST00000475243 VILLO15195 856 aa10.66□□□□□ -0.7
VAPB-204ENST00000475243 CHRNA1P02708 482 aa10.66□□□□□ -0.7
VAPB-204ENST00000475243 LASP1Q14847 261 aaKnown RBP10.66□□□□□ -0.7
VAPB-204ENST00000475243 OR9I1Q8NGQ6 314 aa10.66□□□□□ -0.7
VAPB-204ENST00000475243 GEMIN6Q8WXD5 167 aaKnown RBP10.66□□□□□ -0.7
VAPB-204ENST00000475243 CNDP2Q96KP4 475 aaKnown RBP10.66□□□□□ -0.7
VAPB-204ENST00000475243 USP29Q9HBJ7 922 aa10.66□□□□□ -0.7
VAPB-204ENST00000475243 FARSAQ9Y285 508 aaKnown RBP10.66□□□□□ -0.7
VAPB-204ENST00000475243 GPR89AB7ZAQ6 455 aa10.66□□□□□ -0.7
VAPB-204ENST00000475243 CSTBP04080 98 aaKnown RBP10.66□□□□□ -0.7
VAPB-204ENST00000475243 GPR89BP0CG08 455 aa10.66□□□□□ -0.7
VAPB-204ENST00000475243 DCDC1P59894 354 aa10.66□□□□□ -0.7
VAPB-204ENST00000475243 CYP1B1Q16678 543 aa10.66□□□□□ -0.7
VAPB-204ENST00000475243 RBM48Q5RL73 367 aaKnown RBP10.66□□□□□ -0.7
VAPB-204ENST00000475243 GPAT4Q86UL3 456 aa10.66□□□□□ -0.7
VAPB-204ENST00000475243 TNFRSF10DQ9UBN6 386 aa10.66□□□□□ -0.7
VAPB-204ENST00000475243 CDH1P12830 882 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 IFI30P13284 250 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 ZNF16P17020 682 aaPredicted RBP10.65□□□□□ -0.7
VAPB-204ENST00000475243 HK1P19367 917 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 CAPZA1P52907 286 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 PRKCDQ05655 676 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 DRICH1Q6PGQ1 229 aaPredicted RBP10.65□□□□□ -0.7
VAPB-204ENST00000475243 SLC22A8Q8TCC7 542 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 STON2Q8WXE9 905 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 ZNF69Q9UC07 566 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 PCDHGB5Q9Y5G0 923 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 PHLPP1O60346 1717 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 TRBC2A0A5B9 178 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 TLR4O00206 839 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 LSM1O15116 133 aaKnown RBP10.65□□□□□ -0.7
VAPB-204ENST00000475243 PDCD4Q53EL6 469 aaKnown RBP10.65□□□□□ -0.7
VAPB-204ENST00000475243 MS4A13Q5J8X5 152 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 BPIFB1Q8TDL5 484 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 MYOM1P52179 1685 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 LOC100130705A0A1B0GUX0 176 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 A0A1W2PRQ8 180 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 PLOD2O00469 737 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 ARPC2O15144 300 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 XRCC1P18887 633 aaPredicted RBP10.65□□□□□ -0.7
VAPB-204ENST00000475243 S100A1P23297 94 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 AGTR2P50052 363 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 SEMA3AQ14563 771 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 ZMYND11Q15326 602 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 DUOXA1Q1HG43 343 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 EOGTQ5NDL2 527 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 GALNT15Q8N3T1 639 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 THAP3Q8WTV1 239 aaPredicted RBP10.65□□□□□ -0.7
VAPB-204ENST00000475243 TMBIM1Q969X1 311 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 MRC1P22897 1456 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 IGKV6D-41A0A0C4DH26 115 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 L7N2F9 121 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 G6PDP11413 515 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 SLC11A1P49279 550 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 VAMP2P63027 116 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 MLLT1Q03111 559 aaPredicted RBP10.65□□□□□ -0.7
VAPB-204ENST00000475243 PRRT3Q5FWE3 981 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 OSTM1Q86WC4 334 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 FBXL18Q96ME1 805 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 KCTD7Q96MP8 289 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 SGIP1Q9BQI5 828 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 BCO2Q9BYV7 579 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 TXNRD2Q9NNW7 524 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 PEX12O00623 359 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 POLR2CP19387 275 aaPredicted RBP10.65□□□□□ -0.7
VAPB-204ENST00000475243 PIGWQ7Z7B1 504 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 TMEM110Q86TL2 294 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 SNX29P2Q8IUI4 249 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 SLC6A15Q9H2J7 730 aa10.65□□□□□ -0.7
VAPB-204ENST00000475243 SSU72Q9NP77 194 aaKnown RBP10.65□□□□□ -0.7
VAPB-204ENST00000475243 TTC34A8MYJ7 566 aa10.65□□□□□ -0.71
VAPB-204ENST00000475243 TSPAN4O14817 238 aa10.65□□□□□ -0.71
VAPB-204ENST00000475243 HCKP08631 526 aa10.65□□□□□ -0.71
VAPB-204ENST00000475243 BMP8BP34820 402 aa10.65□□□□□ -0.71
VAPB-204ENST00000475243 OR1E2P47887 323 aa10.65□□□□□ -0.71
VAPB-204ENST00000475243 RPL6Q02878 288 aaKnown RBP10.65□□□□□ -0.71
VAPB-204ENST00000475243 TMIGD1Q6UXZ0 262 aa10.65□□□□□ -0.71
VAPB-204ENST00000475243 BMP8AQ7Z5Y6 402 aa10.65□□□□□ -0.71
VAPB-204ENST00000475243 MARCH9Q86YJ5 346 aa10.65□□□□□ -0.71
VAPB-204ENST00000475243 INO80EQ8NBZ0 244 aaPredicted RBP10.65□□□□□ -0.71
VAPB-204ENST00000475243 NTAN1Q96AB6 310 aa10.65□□□□□ -0.71
VAPB-204ENST00000475243 CAMK1GQ96NX5 476 aa10.65□□□□□ -0.71
VAPB-204ENST00000475243 IRF2BPLQ9H1B7 796 aa10.65□□□□□ -0.71
VAPB-204ENST00000475243 MAU2Q9Y6X3 613 aa10.65□□□□□ -0.71
VAPB-204ENST00000475243 A0A0U1RQF3 1178 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 OR2AT4A6NND4 320 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 M0QX08 132 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 KDM4BO94953 1096 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 C6orf47O95873 294 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 GRK5P34947 590 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 NR0B1P51843 470 aaKnown RBP10.64□□□□□ -0.71
VAPB-204ENST00000475243 HADHBP55084 474 aaKnown RBP10.64□□□□□ -0.71
VAPB-204ENST00000475243 WDR4P57081 412 aaKnown RBP10.64□□□□□ -0.71
VAPB-204ENST00000475243 CD83Q01151 205 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 ARSJQ5FYB0 599 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms