RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 ABOP16442 354 aa13.22□□□□□ -0.29
CCDC78-209ENST00000474647 IL1RNP18510 177 aa13.22□□□□□ -0.29
CCDC78-209ENST00000474647 MGAT1P26572 445 aa13.22□□□□□ -0.29
CCDC78-209ENST00000474647 SSTR2P30874 369 aa13.22□□□□□ -0.29
CCDC78-209ENST00000474647 XCR1P46094 333 aa13.22□□□□□ -0.29
CCDC78-209ENST00000474647 SNRPNP63162 240 aaKnown RBP13.22□□□□□ -0.29
CCDC78-209ENST00000474647 TUBA3CQ13748 450 aa13.22□□□□□ -0.29
CCDC78-209ENST00000474647 FAM53BQ14153 422 aa13.22□□□□□ -0.29
CCDC78-209ENST00000474647 GBX1Q14549 363 aa13.22□□□□□ -0.29
CCDC78-209ENST00000474647 KCNJ11Q14654 390 aa13.22□□□□□ -0.29
CCDC78-209ENST00000474647 ARHGAP19Q14CB8 494 aa13.22□□□□□ -0.29
CCDC78-209ENST00000474647 OR1C1Q15619 314 aa13.22□□□□□ -0.29
CCDC78-209ENST00000474647 ACER2Q5QJU3 275 aa13.22□□□□□ -0.29
CCDC78-209ENST00000474647 PLAG1Q6DJT9 500 aa13.22□□□□□ -0.29
CCDC78-209ENST00000474647 TUBA3EQ6PEY2 450 aa13.22□□□□□ -0.29
CCDC78-209ENST00000474647 ZNF662Q6ZS27 426 aa13.22□□□□□ -0.29
CCDC78-209ENST00000474647 CRLF3Q8IUI8 442 aa13.22□□□□□ -0.29
CCDC78-209ENST00000474647 CEP97Q8IW35 865 aa13.22□□□□□ -0.29
CCDC78-209ENST00000474647 ZNF295-AS1Q8N0V1 137 aa13.22□□□□□ -0.29
CCDC78-209ENST00000474647 ARHGEF39Q8N4T4 335 aa13.22□□□□□ -0.29
CCDC78-209ENST00000474647 ZCCHC10Q8TBK6 192 aa13.22□□□□□ -0.29
CCDC78-209ENST00000474647 MCOLN3Q8TDD5 553 aa13.22□□□□□ -0.29
CCDC78-209ENST00000474647 ZNF480Q8WV37 535 aa13.22□□□□□ -0.29
CCDC78-209ENST00000474647 CYTH2Q99418 400 aa13.22□□□□□ -0.29
CCDC78-209ENST00000474647 UTP23Q9BRU9 249 aaKnown RBP13.22□□□□□ -0.29
CCDC78-209ENST00000474647 RBCK1Q9BYM8 510 aa13.22□□□□□ -0.29
CCDC78-209ENST00000474647 GPAMQ9HCL2 828 aa13.22□□□□□ -0.29
CCDC78-209ENST00000474647 BFARQ9NZS9 450 aa13.22□□□□□ -0.29
CCDC78-209ENST00000474647 PYCARDQ9ULZ3 195 aa13.22□□□□□ -0.29
CCDC78-209ENST00000474647 NPIPA1Q9UND3 350 aa13.22□□□□□ -0.29
CCDC78-209ENST00000474647 PPP2R2CQ9Y2T4 447 aa13.22□□□□□ -0.29
CCDC78-209ENST00000474647 ZFHX3Q15911 3703 aa13.22□□□□□ -0.29
CCDC78-209ENST00000474647 NF1P21359 2839 aa13.21□□□□□ -0.29
CCDC78-209ENST00000474647 OR2W5A6NFC9 320 aa13.21□□□□□ -0.29
CCDC78-209ENST00000474647 H7BY64 318 aa13.21□□□□□ -0.29
CCDC78-209ENST00000474647 ZNHIT1O43257 154 aa13.21□□□□□ -0.29
CCDC78-209ENST00000474647 KRT38O76015 456 aa13.21□□□□□ -0.29
CCDC78-209ENST00000474647 CD46P15529 392 aa13.21□□□□□ -0.29
CCDC78-209ENST00000474647 AGAP20933 346 aa13.21□□□□□ -0.29
CCDC78-209ENST00000474647 ARNTP27540 789 aa13.21□□□□□ -0.29
CCDC78-209ENST00000474647 RPL22P35268 128 aaKnown RBP13.21□□□□□ -0.29
CCDC78-209ENST00000474647 NPY2RP49146 381 aa13.21□□□□□ -0.29
CCDC78-209ENST00000474647 TERF1P54274 439 aa13.21□□□□□ -0.29
CCDC78-209ENST00000474647 OC90Q02509 493 aaPredicted RBP13.21□□□□□ -0.29
CCDC78-209ENST00000474647 CUL1Q13616 776 aa13.21□□□□□ -0.29
CCDC78-209ENST00000474647 MEP1AQ16819 746 aa13.21□□□□□ -0.29
CCDC78-209ENST00000474647 TYSND1Q2T9J0 566 aa13.21□□□□□ -0.29
CCDC78-209ENST00000474647 SLC13A5Q86YT5 568 aaPredicted RBP13.21□□□□□ -0.29
CCDC78-209ENST00000474647 SPPL2CQ8IUH8 684 aa13.21□□□□□ -0.29
CCDC78-209ENST00000474647 REXO1L1PQ8IX06 675 aa13.21□□□□□ -0.29
CCDC78-209ENST00000474647 SHISA5Q8N114 240 aa13.21□□□□□ -0.29
CCDC78-209ENST00000474647 FAM98AQ8NCA5 519 aaKnown RBP13.21□□□□□ -0.29
CCDC78-209ENST00000474647 MDS2Q8NDY4 140 aa13.21□□□□□ -0.29
CCDC78-209ENST00000474647 OR51Q1Q8NH59 317 aa13.21□□□□□ -0.29
CCDC78-209ENST00000474647 CHTF18Q8WVB6 975 aa13.21□□□□□ -0.29
CCDC78-209ENST00000474647 PRAP1Q96NZ9 151 aa13.21□□□□□ -0.29
CCDC78-209ENST00000474647 EBNA1BP2Q99848 306 aaKnown RBP13.21□□□□□ -0.29
CCDC78-209ENST00000474647 MACROD1Q9BQ69 325 aa13.21□□□□□ -0.29
CCDC78-209ENST00000474647 TSGA10Q9BZW7 698 aa13.21□□□□□ -0.29
CCDC78-209ENST00000474647 EIF2B3Q9NR50 452 aaKnown RBP13.21□□□□□ -0.29
CCDC78-209ENST00000474647 MEMO1Q9Y316 297 aa13.21□□□□□ -0.29
CCDC78-209ENST00000474647 GABRR3A8MPY1 467 aa13.2□□□□□ -0.3
CCDC78-209ENST00000474647 E7ENX8 843 aa13.2□□□□□ -0.3
CCDC78-209ENST00000474647 H0YIG0 161 aa13.2□□□□□ -0.3
CCDC78-209ENST00000474647 SGK494L7N484 410 aa13.2□□□□□ -0.3
CCDC78-209ENST00000474647 MAN1A2O60476 641 aa13.2□□□□□ -0.3
CCDC78-209ENST00000474647 CDC123O75794 336 aaPredicted RBP13.2□□□□□ -0.3
CCDC78-209ENST00000474647 NSA2O95478 260 aaKnown RBP13.2□□□□□ -0.3
CCDC78-209ENST00000474647 F7P08709 466 aaPredicted RBP13.2□□□□□ -0.3
CCDC78-209ENST00000474647 HSD17B2P37059 387 aa13.2□□□□□ -0.3
CCDC78-209ENST00000474647 KIR3DL1P43629 444 aa13.2□□□□□ -0.3
CCDC78-209ENST00000474647 KRTAP10-9P60411 292 aa13.2□□□□□ -0.3
CCDC78-209ENST00000474647 ABATP80404 500 aa13.2□□□□□ -0.3
CCDC78-209ENST00000474647 HSF1Q00613 529 aa13.2□□□□□ -0.3
CCDC78-209ENST00000474647 TAP2Q03519 686 aa13.2□□□□□ -0.3
CCDC78-209ENST00000474647 KRTCAP3Q53RY4 240 aa13.2□□□□□ -0.3
CCDC78-209ENST00000474647 MEI1Q5TIA1 1274 aa13.2□□□□□ -0.3
CCDC78-209ENST00000474647 SPINK14Q6IE38 97 aa13.2□□□□□ -0.3
CCDC78-209ENST00000474647 C3P1Q6ZMU1 363 aa13.2□□□□□ -0.3
CCDC78-209ENST00000474647 GSTA5Q7RTV2 222 aa13.2□□□□□ -0.3
CCDC78-209ENST00000474647 GALNTL5Q7Z4T8 443 aa13.2□□□□□ -0.3
CCDC78-209ENST00000474647 ANKRD37Q7Z713 158 aa13.2□□□□□ -0.3
CCDC78-209ENST00000474647 CDH24Q86UP0 819 aa13.2□□□□□ -0.3
CCDC78-209ENST00000474647 TMEM178AQ8NBL3 297 aa13.2□□□□□ -0.3
CCDC78-209ENST00000474647 ADAMTS18Q8TE60 1221 aa13.2□□□□□ -0.3
CCDC78-209ENST00000474647 THAP3Q8WTV1 239 aaPredicted RBP13.2□□□□□ -0.3
CCDC78-209ENST00000474647 TRIM44Q96DX7 344 aaPredicted RBP13.2□□□□□ -0.3
CCDC78-209ENST00000474647 FRMD6Q96NE9 622 aa13.2□□□□□ -0.3
CCDC78-209ENST00000474647 PCDHGB6Q9Y5F9 930 aa13.2□□□□□ -0.3
CCDC78-209ENST00000474647 DNAJC13O75165 2243 aa13.19□□□□□ -0.3
CCDC78-209ENST00000474647 ZNF407Q9C0G0 2248 aa13.19□□□□□ -0.3
CCDC78-209ENST00000474647 AP3B1O00203 1094 aa13.19□□□□□ -0.3
CCDC78-209ENST00000474647 ZSCAN12O43309 604 aa13.19□□□□□ -0.3
CCDC78-209ENST00000474647 RDH16O75452 317 aa13.19□□□□□ -0.3
CCDC78-209ENST00000474647 OGNP20774 298 aaKnown RBP13.19□□□□□ -0.3
CCDC78-209ENST00000474647 CD96P40200 585 aa13.19□□□□□ -0.3
CCDC78-209ENST00000474647 AGTR2P50052 363 aa13.19□□□□□ -0.3
CCDC78-209ENST00000474647 RPS15AP62244 130 aaKnown RBP13.19□□□□□ -0.3
CCDC78-209ENST00000474647 TLE4Q04727 773 aa13.19□□□□□ -0.3
CCDC78-209ENST00000474647 ACTN3Q08043 901 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms