RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 COL28A1Q2UY09 1125 aa5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 PDLIM3Q53GG5 364 aaPredicted RBP5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 LBHQ53QV2 105 aaPredicted RBP5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 COQ5Q5HYK3 327 aa5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 RNLSQ5VYX0 342 aa5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 OR5M10Q6IEU7 315 aa5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 ARMCX5Q6P1M9 558 aa5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 FIGNL1Q6PIW4 674 aa5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 TMC8Q8IU68 726 aa5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 C1orf210Q8IVY1 113 aa5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 ARHGEF19Q8IW93 802 aa5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 CCDC60Q8IWA6 550 aaPredicted RBP5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 CPSF7Q8N684 471 aaKnown RBP5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 UBL4BQ8N7F7 174 aa5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 FAM86B1Q8N7N1 296 aa5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 GPX8Q8TED1 209 aa5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 DCAF4Q8WV16 495 aa5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 ADIPOR1Q96A54 375 aa5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 OMA1Q96E52 524 aa5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 FAM89AQ96GI7 184 aa5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 PRR11Q96HE9 360 aaPredicted RBP5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 TEFMQ96QE5 360 aaKnown RBP5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 ZYG11BQ9C0D3 744 aa5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 GOLPH3Q9H4A6 298 aa5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 MED17Q9NVC6 651 aa5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 MRPL22Q9NWU5 206 aaKnown RBP5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 GPN3Q9UHW5 284 aaPredicted RBP5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 GDF2Q9UK05 429 aaPredicted RBP5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 SARDHQ9UL12 918 aa5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 ERVW-1Q9UQF0 538 aa5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 GPR55Q9Y2T6 319 aaPredicted RBP5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 SAMM50Q9Y512 469 aa5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 PCDHGB1Q9Y5G3 927 aa5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 RTL9Q8NET4 1388 aa5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 CCDC187A0A096LP49 1063 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 A0A0A6YYC8 382 aaPredicted RBP5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 A0A0U1RQJ8 604 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 FAM237BA0A1B0GVD1 139 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 OR2A25A4D2G3 310 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 F8VP50 259 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 I3L1I5 382 aaPredicted RBP5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 HAS3O00219 553 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 PDHXO00330 501 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 ZNF213O14771 459 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 RGS13O14921 159 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 RNMTO43148 476 aaKnown RBP5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 ADCY6O43306 1168 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 DFNA5O60443 496 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 CCNT2O60583 730 aaKnown RBP5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 TRIM13O60858 407 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 SNNO75324 88 aaPredicted RBP5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 TAF5LO75529 589 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 ALX3O95076 343 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 SYF2O95926 243 aaKnown RBP5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 FCER2P06734 321 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 SRPRAP08240 638 aaKnown RBP5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 TMEM191BP0C7N4 346 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 C8orf89P0DMQ9 161 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 CYP4B1P13584 511 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 CD33P20138 364 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 BDKRB2P30411 391 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 CD80P33681 288 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 MC3RP41968 323 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 SLC1A2P43004 574 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 CCNG1P51959 295 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 TAS2R60P59551 318 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 CXCR4P61073 352 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 NKX6-1P78426 367 aaPredicted RBP5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 LTB4RQ15722 352 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 KCNMB1Q16558 191 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 RAP1GAP2Q684P5 730 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 RNF207Q6ZRF8 634 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 ACAD11Q709F0 780 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 EIF3MQ7L2H7 374 aaKnown RBP5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 ADAT2Q7Z6V5 191 aaKnown RBP5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 ECHDC2Q86YB7 292 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 RCOR2Q8IZ40 523 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 METTL25Q8N6Q8 603 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 UXS1Q8NBZ7 420 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 SLC37A3Q8NCC5 494 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 SLC44A5Q8NCS7 719 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 GPRC5AQ8NFJ5 357 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 OR5D18Q8NGL1 313 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 ZCCHC10Q8TBK6 192 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 PNPT1Q8TCS8 783 aaKnown RBP5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 ARNTL2Q8WYA1 636 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 C3orf49Q96BT1 292 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 NMD3Q96D46 503 aaKnown RBP5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 REPS1Q96D71 796 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 DTD2Q96FN9 168 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 ASCL2Q99929 193 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 WDR83Q9BRX9 315 aaKnown RBP5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 PHF7Q9BWX1 381 aaPredicted RBP5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 ALX4Q9H161 411 aaPredicted RBP5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 METTL9Q9H1A3 318 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 PDZD7Q9H5P4 517 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 MOV10Q9HCE1 1003 aaKnown RBP5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 TXLNGQ9NUQ3 528 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 PRMT7Q9NVM4 692 aaPredicted RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms