RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 EMP2P54851 167 aa10.62□□□□□ -0.71
CKS1B-206ENST00000474215 MLLT10P55197 1068 aa10.62□□□□□ -0.71
CKS1B-206ENST00000474215 CDKL1Q00532 357 aa10.62□□□□□ -0.71
CKS1B-206ENST00000474215 SLC7A5Q01650 507 aa10.62□□□□□ -0.71
CKS1B-206ENST00000474215 CSHL1Q14406 222 aa10.62□□□□□ -0.71
CKS1B-206ENST00000474215 USP10Q14694 798 aaKnown RBP10.62□□□□□ -0.71
CKS1B-206ENST00000474215 TUBB8Q3ZCM7 444 aa10.62□□□□□ -0.71
CKS1B-206ENST00000474215 ATG9BQ674R7 924 aa10.62□□□□□ -0.71
CKS1B-206ENST00000474215 JMJD6Q6NYC1 403 aaPredicted RBP10.62□□□□□ -0.71
CKS1B-206ENST00000474215 ZDHHC24Q6UX98 284 aa10.62□□□□□ -0.71
CKS1B-206ENST00000474215 IGFL3Q6UXB1 125 aa10.62□□□□□ -0.71
CKS1B-206ENST00000474215 CCDC25Q86WR0 208 aa10.62□□□□□ -0.71
CKS1B-206ENST00000474215 MFSD9Q8NBP5 474 aa10.62□□□□□ -0.71
CKS1B-206ENST00000474215 CAMKVQ8NCB2 501 aa10.62□□□□□ -0.71
CKS1B-206ENST00000474215 OR11G2Q8NGC1 345 aa10.62□□□□□ -0.71
CKS1B-206ENST00000474215 OR9A4Q8NGU2 314 aa10.62□□□□□ -0.71
CKS1B-206ENST00000474215 SLC13A3Q8WWT9 602 aa10.62□□□□□ -0.71
CKS1B-206ENST00000474215 TSPAN17Q96FV3 270 aa10.62□□□□□ -0.71
CKS1B-206ENST00000474215 C16orf45Q96MC5 204 aaPredicted RBP10.62□□□□□ -0.71
CKS1B-206ENST00000474215 LRRC1Q9BTT6 524 aa10.62□□□□□ -0.71
CKS1B-206ENST00000474215 ZNF552Q9H707 407 aaPredicted RBP10.62□□□□□ -0.71
CKS1B-206ENST00000474215 CAB39LQ9H9S4 337 aa10.62□□□□□ -0.71
CKS1B-206ENST00000474215 C14orf105Q9NVL8 296 aa10.62□□□□□ -0.71
CKS1B-206ENST00000474215 CTNNAL1Q9UBT7 734 aa10.62□□□□□ -0.71
CKS1B-206ENST00000474215 MRPS2Q9Y399 296 aaKnown RBP10.62□□□□□ -0.71
CKS1B-206ENST00000474215 MAP4K5Q9Y4K4 846 aa10.62□□□□□ -0.71
CKS1B-206ENST00000474215 TRBC2A0A5B9 178 aa10.61□□□□□ -0.71
CKS1B-206ENST00000474215 IDSB3KWA1 339 aa10.61□□□□□ -0.71
CKS1B-206ENST00000474215 H0YIG0 161 aa10.61□□□□□ -0.71
CKS1B-206ENST00000474215 OR1F1O43749 312 aa10.61□□□□□ -0.71
CKS1B-206ENST00000474215 C1QAP02745 245 aa10.61□□□□□ -0.71
CKS1B-206ENST00000474215 ACPPP15309 386 aa10.61□□□□□ -0.71
CKS1B-206ENST00000474215 CXCR2P25025 360 aa10.61□□□□□ -0.71
CKS1B-206ENST00000474215 ITGA3P26006 1051 aa10.61□□□□□ -0.71
CKS1B-206ENST00000474215 GP5P40197 560 aa10.61□□□□□ -0.71
CKS1B-206ENST00000474215 HNMTP50135 292 aa10.61□□□□□ -0.71
CKS1B-206ENST00000474215 SNRPNP63162 240 aaKnown RBP10.61□□□□□ -0.71
CKS1B-206ENST00000474215 GUCY2DQ02846 1103 aa10.61□□□□□ -0.71
CKS1B-206ENST00000474215 TSNQ15631 228 aaKnown RBP10.61□□□□□ -0.71
CKS1B-206ENST00000474215 SYT16Q17RD7 645 aa10.61□□□□□ -0.71
CKS1B-206ENST00000474215 WHAMMP3Q1A5X7 153 aa10.61□□□□□ -0.71
CKS1B-206ENST00000474215 CATSPEREQ5SY80 951 aa10.61□□□□□ -0.71
CKS1B-206ENST00000474215 GRTP1Q5TC63 336 aa10.61□□□□□ -0.71
CKS1B-206ENST00000474215 TMEM214Q6NUQ4 689 aaKnown RBP10.61□□□□□ -0.71
CKS1B-206ENST00000474215 C8orf74Q6P047 294 aa10.61□□□□□ -0.71
CKS1B-206ENST00000474215 ADAMTSL2Q86TH1 951 aa10.61□□□□□ -0.71
CKS1B-206ENST00000474215 ASPGQ86U10 573 aa10.61□□□□□ -0.71
CKS1B-206ENST00000474215 THOC6Q86W42 341 aaKnown RBP10.61□□□□□ -0.71
CKS1B-206ENST00000474215 CTAGE3PQ8IX95 158 aa10.61□□□□□ -0.71
CKS1B-206ENST00000474215 PARP9Q8IXQ6 854 aa10.61□□□□□ -0.71
CKS1B-206ENST00000474215 TBC1D19Q8N5T2 526 aa10.61□□□□□ -0.71
CKS1B-206ENST00000474215 RBMXL3Q8N7X1 1067 aaKnown RBP10.61□□□□□ -0.71
CKS1B-206ENST00000474215 KCT2Q8NC54 265 aa10.61□□□□□ -0.71
CKS1B-206ENST00000474215 NEIL2Q969S2 332 aa10.61□□□□□ -0.71
CKS1B-206ENST00000474215 PNPLA2Q96AD5 504 aa10.61□□□□□ -0.71
CKS1B-206ENST00000474215 GPR22Q99680 433 aa10.61□□□□□ -0.71
CKS1B-206ENST00000474215 RBBP8Q99708 897 aa10.61□□□□□ -0.71
CKS1B-206ENST00000474215 EGFL8Q99944 293 aa10.61□□□□□ -0.71
CKS1B-206ENST00000474215 MESP1Q9BRJ9 268 aa10.61□□□□□ -0.71
CKS1B-206ENST00000474215 SARGQ9BW04 601 aa10.61□□□□□ -0.71
CKS1B-206ENST00000474215 MFRPQ9BY79 579 aa10.61□□□□□ -0.71
CKS1B-206ENST00000474215 DERL2Q9GZP9 239 aa10.61□□□□□ -0.71
CKS1B-206ENST00000474215 LRRC4CQ9HCJ2 640 aa10.61□□□□□ -0.71
CKS1B-206ENST00000474215 PLAAQ9Y263 795 aa10.61□□□□□ -0.71
CKS1B-206ENST00000474215 OARD1Q9Y530 152 aa10.61□□□□□ -0.71
CKS1B-206ENST00000474215 SLC22A7Q9Y694 548 aa10.61□□□□□ -0.71
CKS1B-206ENST00000474215 MED13Q9UHV7 2174 aa10.6□□□□□ -0.71
CKS1B-206ENST00000474215 MYO18BQ8IUG5 2567 aa10.6□□□□□ -0.71
CKS1B-206ENST00000474215 ESYT3A0FGR9 886 aa10.6□□□□□ -0.71
CKS1B-206ENST00000474215 MAP2K7O14733 419 aa10.6□□□□□ -0.71
CKS1B-206ENST00000474215 PCDH17O14917 1159 aa10.6□□□□□ -0.71
CKS1B-206ENST00000474215 ALOX12BO75342 701 aa10.6□□□□□ -0.71
CKS1B-206ENST00000474215 SORBS2O94875 1100 aaKnown RBP10.6□□□□□ -0.71
CKS1B-206ENST00000474215 WISP3O95389 354 aaPredicted RBP10.6□□□□□ -0.71
CKS1B-206ENST00000474215 BMP10O95393 424 aa10.6□□□□□ -0.71
CKS1B-206ENST00000474215 NSA2O95478 260 aaKnown RBP10.6□□□□□ -0.71
CKS1B-206ENST00000474215 HPP00738 406 aa10.6□□□□□ -0.71
CKS1B-206ENST00000474215 HEXBP07686 556 aa10.6□□□□□ -0.71
CKS1B-206ENST00000474215 SLC35G6P0C7Q6 338 aa10.6□□□□□ -0.71
CKS1B-206ENST00000474215 CCDC166P0CW27 439 aa10.6□□□□□ -0.71
CKS1B-206ENST00000474215 STMN1P16949 149 aa10.6□□□□□ -0.71
CKS1B-206ENST00000474215 STX2P32856 288 aa10.6□□□□□ -0.71
CKS1B-206ENST00000474215 SPRP35270 261 aaPredicted RBP10.6□□□□□ -0.71
CKS1B-206ENST00000474215 CD97P48960 835 aa10.6□□□□□ -0.71
CKS1B-206ENST00000474215 MAT1AQ00266 395 aaKnown RBP10.6□□□□□ -0.71
CKS1B-206ENST00000474215 MEF2AQ02078 507 aaPredicted RBP10.6□□□□□ -0.71
CKS1B-206ENST00000474215 PWP1Q13610 501 aa10.6□□□□□ -0.71
CKS1B-206ENST00000474215 KBTBD12Q3ZCT8 623 aa10.6□□□□□ -0.71
CKS1B-206ENST00000474215 PLEKHN1Q494U1 663 aaPredicted RBP10.6□□□□□ -0.71
CKS1B-206ENST00000474215 AGAP7PQ5VUJ5 663 aa10.6□□□□□ -0.71
CKS1B-206ENST00000474215 IRAK1BP1Q5VVH5 260 aa10.6□□□□□ -0.71
CKS1B-206ENST00000474215 SLC6A19Q695T7 634 aa10.6□□□□□ -0.71
CKS1B-206ENST00000474215 FRA10AC1Q70Z53 315 aa10.6□□□□□ -0.71
CKS1B-206ENST00000474215 NDUFAF7Q7L592 441 aa10.6□□□□□ -0.71
CKS1B-206ENST00000474215 PRSS41Q7RTY9 318 aa10.6□□□□□ -0.71
CKS1B-206ENST00000474215 SPATA6LQ8N4H0 392 aa10.6□□□□□ -0.71
CKS1B-206ENST00000474215 ZADH2Q8N4Q0 377 aa10.6□□□□□ -0.71
CKS1B-206ENST00000474215 PPM1NQ8N819 430 aa10.6□□□□□ -0.71
CKS1B-206ENST00000474215 ZNF740Q8NDX6 193 aa10.6□□□□□ -0.71
CKS1B-206ENST00000474215 FBF1Q8TES7 1133 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms