RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 OR4D1Q15615 310 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 NKG7Q16617 165 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 FAM83EQ2M2I3 478 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 C18orf21Q32NC0 220 aaPredicted RBP13.53□□□□□ -0.24
VAMP4-203ENST00000474047 TEX35Q5T0J7 233 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 SULT1C3Q6IMI6 304 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 KLC3Q6P597 504 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 SHISA6Q6ZSJ9 500 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 MED25Q71SY5 747 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 TMPRSS11BQ86T26 416 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 APLFQ8IW19 511 aaPredicted RBP13.53□□□□□ -0.24
VAMP4-203ENST00000474047 PRSS58Q8IYP2 241 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 DTWD1Q8N5C7 304 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 MFSD9Q8NBP5 474 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 ADAMTS17Q8TE56 1095 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 MIEF2Q96C03 454 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 ABHD17AQ96GS6 310 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 VPS50Q96JG6 964 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 MACROD1Q9BQ69 325 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 SOX17Q9H6I2 414 aaPredicted RBP13.53□□□□□ -0.24
VAMP4-203ENST00000474047 ZNF71Q9NQZ8 489 aaPredicted RBP13.53□□□□□ -0.24
VAMP4-203ENST00000474047 SNX15Q9NRS6 342 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 TRPC4Q9UBN4 977 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 CTSFQ9UBX1 484 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 TRBC2A0A5B9 178 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 SUPT3HB4E1H0 165 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 LCMT2O60294 686 aaKnown RBP13.53□□□□□ -0.24
VAMP4-203ENST00000474047 SUPT3HO75486 399 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 KRT38O76015 456 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 MED26O95402 600 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 GNAZP19086 355 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 SLC26A3P40879 764 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 GDF5P43026 501 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 FOXL2P58012 376 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 FAM53BQ14153 422 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 CDKL4Q5MAI5 379 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 UBAP2Q5T6F2 1119 aaKnown RBP13.53□□□□□ -0.24
VAMP4-203ENST00000474047 NXPE4Q6UWF7 544 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 COX15Q7KZN9 410 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 TMEM102Q8N9M5 508 aaPredicted RBP13.53□□□□□ -0.24
VAMP4-203ENST00000474047 SNX31Q8N9S9 440 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 OR4K1Q8NGD4 311 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 NXNL1Q96CM4 212 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 FER1L6-AS2Q96M78 137 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 CAPS2Q9BXY5 557 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 VPS11Q9H270 941 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 SLC26A1Q9H2B4 701 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 SYNPO2LQ9H987 977 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 PELI2Q9HAT8 420 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 ANKHQ9HCJ1 492 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 PIEZO2Q9H5I5 2752 aa13.52□□□□□ -0.24
VAMP4-203ENST00000474047 A0A096LPK6 155 aa13.52□□□□□ -0.25
VAMP4-203ENST00000474047 CLGNO14967 610 aa13.52□□□□□ -0.25
VAMP4-203ENST00000474047 NDUFS4O43181 175 aa13.52□□□□□ -0.25
VAMP4-203ENST00000474047 CCNT2O60583 730 aaKnown RBP13.52□□□□□ -0.25
VAMP4-203ENST00000474047 CNOT3O75175 753 aaKnown RBP13.52□□□□□ -0.25
VAMP4-203ENST00000474047 STK16O75716 305 aa13.52□□□□□ -0.25
VAMP4-203ENST00000474047 DNAJB5O75953 348 aa13.52□□□□□ -0.25
VAMP4-203ENST00000474047 C1QL1O75973 258 aa13.52□□□□□ -0.25
VAMP4-203ENST00000474047 IPO13O94829 963 aaKnown RBP13.52□□□□□ -0.25
VAMP4-203ENST00000474047 C2P06681 752 aa13.52□□□□□ -0.25
VAMP4-203ENST00000474047 CXCR2P25025 360 aa13.52□□□□□ -0.25
VAMP4-203ENST00000474047 GMPRP36959 345 aa13.52□□□□□ -0.25
VAMP4-203ENST00000474047 HSPA7P48741 367 aa13.52□□□□□ -0.25
VAMP4-203ENST00000474047 RGS1Q08116 209 aa13.52□□□□□ -0.25
VAMP4-203ENST00000474047 CDC16Q13042 620 aa13.52□□□□□ -0.25
VAMP4-203ENST00000474047 DSG2Q14126 1118 aa13.52□□□□□ -0.25
VAMP4-203ENST00000474047 RBBP7Q16576 425 aa13.52□□□□□ -0.25
VAMP4-203ENST00000474047 LACTB2Q53H82 288 aaPredicted RBP13.52□□□□□ -0.25
VAMP4-203ENST00000474047 LGSNQ5TDP6 509 aa13.52□□□□□ -0.25
VAMP4-203ENST00000474047 CPZQ66K79 652 aa13.52□□□□□ -0.25
VAMP4-203ENST00000474047 TRMT10CQ7L0Y3 403 aaKnown RBP13.52□□□□□ -0.25
VAMP4-203ENST00000474047 VN1R4Q7Z5H5 301 aa13.52□□□□□ -0.25
VAMP4-203ENST00000474047 MRGPREQ86SM8 312 aa13.52□□□□□ -0.25
VAMP4-203ENST00000474047 ZNF605Q86T29 641 aa13.52□□□□□ -0.25
VAMP4-203ENST00000474047 ZCCHC10Q8TBK6 192 aa13.52□□□□□ -0.25
VAMP4-203ENST00000474047 STT3BQ8TCJ2 826 aa13.52□□□□□ -0.25
VAMP4-203ENST00000474047 KCTD4Q8WVF5 259 aa13.52□□□□□ -0.25
VAMP4-203ENST00000474047 SLC44A1Q8WWI5 657 aa13.52□□□□□ -0.25
VAMP4-203ENST00000474047 PAFAH2Q99487 392 aa13.52□□□□□ -0.25
VAMP4-203ENST00000474047 CRB3Q9BUF7 120 aa13.52□□□□□ -0.25
VAMP4-203ENST00000474047 FUT8Q9BYC5 575 aa13.52□□□□□ -0.25
VAMP4-203ENST00000474047 DNAJC11Q9NVH1 559 aa13.52□□□□□ -0.25
VAMP4-203ENST00000474047 EXOC1LA0A1B0GW35 172 aa13.51□□□□□ -0.25
VAMP4-203ENST00000474047 A6NL46 340 aa13.51□□□□□ -0.25
VAMP4-203ENST00000474047 SYCE1LA8MT33 242 aa13.51□□□□□ -0.25
VAMP4-203ENST00000474047 UMODP07911 640 aa13.51□□□□□ -0.25
VAMP4-203ENST00000474047 ZGLP1P0C6A0 271 aa13.51□□□□□ -0.25
VAMP4-203ENST00000474047 FBXO48Q5FWF7 155 aa13.51□□□□□ -0.25
VAMP4-203ENST00000474047 ISCA2Q86U28 154 aa13.51□□□□□ -0.25
VAMP4-203ENST00000474047 CLEC1AQ8NC01 280 aa13.51□□□□□ -0.25
VAMP4-203ENST00000474047 KCT2Q8NC54 265 aa13.51□□□□□ -0.25
VAMP4-203ENST00000474047 OR9A4Q8NGU2 314 aa13.51□□□□□ -0.25
VAMP4-203ENST00000474047 SLC25A23Q9BV35 468 aa13.51□□□□□ -0.25
VAMP4-203ENST00000474047 TRIM55Q9BYV6 548 aa13.51□□□□□ -0.25
VAMP4-203ENST00000474047 MKKSQ9NPJ1 570 aaPredicted RBP13.51□□□□□ -0.25
VAMP4-203ENST00000474047 SEMA3GQ9NS98 782 aa13.51□□□□□ -0.25
VAMP4-203ENST00000474047 IGSF5Q9NSI5 407 aa13.51□□□□□ -0.25
VAMP4-203ENST00000474047 P4HTMQ9NXG6 502 aa13.51□□□□□ -0.25
VAMP4-203ENST00000474047 NUDT4Q9NZJ9 180 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms