RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 ARHGAP25P42331 645 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 MATKP42679 507 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 PPP3CCP48454 512 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 SLC11A1P49279 550 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 MLLT10P55197 1068 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 FOXG1P55316 489 aaPredicted RBP2.26□□□□□ -2.05
CALD1-216ENST00000473714 SNRPEP62304 92 aaKnown RBP2.26□□□□□ -2.05
CALD1-216ENST00000473714 RPS6P62753 249 aaKnown RBP2.26□□□□□ -2.05
CALD1-216ENST00000473714 CSNK2A1P68400 391 aaPredicted RBP2.26□□□□□ -2.05
CALD1-216ENST00000473714 SIRPAP78324 504 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 FAM27E3Q08E93 113 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 FCHO2Q0JRZ9 810 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 SRSF6Q13247 344 aaKnown RBP2.26□□□□□ -2.05
CALD1-216ENST00000473714 GPR18Q14330 331 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 SLMAPQ14BN4 828 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 TAZQ16635 292 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 ZNF674Q2M3X9 581 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 C2orf68Q2NKX9 166 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 FAM78AQ5JUQ0 283 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 MANEAQ5SRI9 462 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 CELF3Q5SZQ8 465 aaKnown RBP2.26□□□□□ -2.05
CALD1-216ENST00000473714 DCST1Q5T197 706 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 TYW3Q6IPR3 259 aaKnown RBP2.26□□□□□ -2.05
CALD1-216ENST00000473714 C11orf87Q6NUJ2 197 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 DUS1LQ6P1R4 473 aaKnown RBP2.26□□□□□ -2.05
CALD1-216ENST00000473714 DEF8Q6ZN54 512 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 SLC16A12Q6ZSM3 486 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 SHFQ7M4L6 423 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 CENPVQ7Z7K6 275 aaPredicted RBP2.26□□□□□ -2.05
CALD1-216ENST00000473714 PATL1Q86TB9 770 aaKnown RBP2.26□□□□□ -2.05
CALD1-216ENST00000473714 LDB1Q86U70 411 aaPredicted RBP2.26□□□□□ -2.05
CALD1-216ENST00000473714 BIVMQ86UB2 503 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 GPR180Q86V85 440 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 TUSC5Q8IXB3 177 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 GPR65Q8IYL9 337 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 RBFAQ8N0V3 343 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 CARNMT1Q8N4J0 409 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 EMC1Q8N766 993 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 CSNK2A3Q8NEV1 391 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 TSTD1Q8NFU3 115 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 EXD1Q8NHP7 514 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 PSMA8Q8TAA3 256 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 GRK7Q8WTQ7 553 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 DDB2Q92466 427 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 EXOC4Q96A65 974 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 ORAI1Q96D31 301 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 ZNF830Q96NB3 372 aaPredicted RBP2.26□□□□□ -2.05
CALD1-216ENST00000473714 FUCA2Q9BTY2 467 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 MMTAG2Q9BU76 263 aaKnown RBP2.26□□□□□ -2.05
CALD1-216ENST00000473714 FNDC11Q9BVV2 318 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 ACAT2Q9BWD1 397 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 GATA5Q9BWX5 397 aaPredicted RBP2.26□□□□□ -2.05
CALD1-216ENST00000473714 POLDIP3Q9BY77 421 aaKnown RBP2.26□□□□□ -2.05
CALD1-216ENST00000473714 SPRTNQ9H040 489 aaPredicted RBP2.26□□□□□ -2.05
CALD1-216ENST00000473714 FAM49AQ9H0Q0 323 aaPredicted RBP2.26□□□□□ -2.05
CALD1-216ENST00000473714 RETREG1Q9H6L5 497 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 GAREM1Q9H706 876 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 PPP1R3EQ9H7J1 279 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 CATSPERBQ9H7T0 1116 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 NOL11Q9H8H0 719 aaKnown RBP2.26□□□□□ -2.05
CALD1-216ENST00000473714 TRPV4Q9HBA0 871 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 TMEM51Q9NW97 253 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 ADPRHL2Q9NX46 363 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 UBA2Q9UBT2 640 aaPredicted RBP2.26□□□□□ -2.05
CALD1-216ENST00000473714 DNAJB4Q9UDY4 337 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 SERGEFQ9UGK8 458 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 ERRFI1Q9UJM3 462 aaPredicted RBP2.26□□□□□ -2.05
CALD1-216ENST00000473714 CPSF3Q9UKF6 684 aaKnown RBP2.26□□□□□ -2.05
CALD1-216ENST00000473714 AGO2Q9UKV8 859 aaKnown RBP2.26□□□□□ -2.05
CALD1-216ENST00000473714 CCPG1Q9ULG6 757 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 ODF2LQ9ULJ1 636 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 ITM2BQ9Y287 266 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 NFE2L3Q9Y4A8 694 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 CLIC4Q9Y696 253 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 ZNF638Q14966 1978 aaKnown RBP2.26□□□□□ -2.05
CALD1-216ENST00000473714 HYDINQ4G0P3 5121 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 NUP210Q8TEM1 1887 aaPredicted RBP2.26□□□□□ -2.05
CALD1-216ENST00000473714 ZNF106Q9H2Y7 1883 aaKnown RBP2.26□□□□□ -2.05
CALD1-216ENST00000473714 ARID2Q68CP9 1835 aa2.26□□□□□ -2.05
CALD1-216ENST00000473714 VPS13CQ709C8 3753 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 TDRD15B5MCY1 1934 aaKnown RBP2.25□□□□□ -2.05
CALD1-216ENST00000473714 ABCB11O95342 1321 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 ANK1P16157 1881 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 LRRD1A4D1F6 860 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 MBLAC1A4D2B0 266 aaPredicted RBP2.25□□□□□ -2.05
CALD1-216ENST00000473714 ANTXRLA6NF34 631 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 ANXA2P2A6NMY6 339 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 KCNU1A8MYU2 1149 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 M0QZ92 97 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 TRDMT1O14717 391 aaKnown RBP2.25□□□□□ -2.05
CALD1-216ENST00000473714 MAP2K7O14733 419 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 SMAD9O15198 467 aaKnown RBP2.25□□□□□ -2.05
CALD1-216ENST00000473714 ASAP2O43150 1006 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 NDUFS4O43181 175 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 SPINT2O43291 252 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 PLRG1O43660 514 aaKnown RBP2.25□□□□□ -2.05
CALD1-216ENST00000473714 KLK8O60259 260 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 ZIC3O60481 467 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 KERAO60938 352 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 RPS6KA5O75582 802 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms