RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 FMO5P49326 533 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 ATP12AP54707 1039 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 SCAND1P57086 179 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 UBE2IP63279 158 aaKnown RBP4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 KCNJ10P78508 379 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 GTF2BQ00403 316 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 SCN1BQ07699 218 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 FGL2Q14314 439 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 GRB7Q14451 532 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 PCLAFQ15004 111 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 MLC1Q15049 377 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 PDCD1Q15116 288 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 QPRTQ15274 297 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 SSX2Q16385 188 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 LCN8Q6JVE9 175 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 FAM45BPQ6NSW5 357 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 BHLHB9Q6PI77 547 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 TMC8Q8IU68 726 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 SLC22A9Q8IVM8 553 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 CMTR2Q8IYT2 770 aaKnown RBP4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 RNF113BQ8IZP6 322 aaKnown RBP4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 OR8H2Q8N162 312 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 CRYBG2Q8N1P7 616 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 OXR1Q8N573 874 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 CAMKK1Q8N5S9 505 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 EIF4E3Q8N5X7 224 aaKnown RBP4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 TTLL6Q8N841 843 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 C12orf29Q8N999 325 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 GLIS1Q8NBF1 620 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 PAPD5Q8NDF8 572 aaKnown RBP4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 FAM45AQ8TCE6 357 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 ASB15Q8WXK1 588 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 CPT1BQ92523 772 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 CPNE4Q96A23 557 aaPredicted RBP4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 SORCS2Q96PQ0 1159 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 SDHCQ99643 169 aaPredicted RBP4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 SLC30A2Q9BRI3 323 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 CCM2Q9BSQ5 444 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 PRRG3Q9BZD7 231 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 BTBD1Q9H0C5 482 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 DBNDD1Q9H9R9 158 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 CRLF2Q9HC73 371 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 PRDM7Q9NQW5 492 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 SMYD2Q9NRG4 433 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 DPP3Q9NY33 737 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 DCDC2Q9UHG0 476 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 DNPEPQ9ULA0 475 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 ING4Q9UNL4 249 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 DMRT1Q9Y5R6 373 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 LCHNA4D1U4 455 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 FAM90A27PA6NNH2 459 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 A8MXK9 166 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 B4DXG7 233 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 SLC1A7O00341 560 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 PCDHGA12O60330 932 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 MAFKO60675 156 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 CST8O60676 142 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 CYP7B1O75881 506 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 HSPA4LO95757 839 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 LTFP02788 710 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 C4BPAP04003 597 aaKnown RBP4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 NR3C1P04150 777 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 FCER2P06734 321 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 CD63P08962 238 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 ZNF806P0C7X5 589 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 THRBP10828 461 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 UMPSP11172 480 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 CHRM3P20309 590 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 PBLDP30039 288 aaPredicted RBP4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 PTPN7P35236 360 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 PIK3CBP42338 1070 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 NSFP46459 744 aaKnown RBP4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 ALDH3A2P51648 485 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 GPR143P51810 404 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 KPNA2P52292 529 aaKnown RBP4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 AP1S1P61966 158 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 IL18R1Q13478 541 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 EMC2Q15006 297 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 PON3Q15166 354 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 AARDQ4LEZ3 155 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 TOR1AIP1Q5JTV8 583 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 LRRC66Q68CR7 880 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 SLC25A25Q6KCM7 469 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 DPP8Q6V1X1 898 aaPredicted RBP4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 FAM183BPQ6ZVS7 135 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 CAMKVQ8NCB2 501 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 RNASE11Q8TAA1 199 aaKnown RBP4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 PHOSPHO1Q8TCT1 267 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 SFT2D1Q8WV19 159 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 C16orf92Q96LL3 132 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 SERINC2Q96SA4 455 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 NELL2Q99435 816 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 ZBTB18Q99592 522 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 ZPBPQ9BS86 351 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 FEM1AQ9BSK4 669 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 FTHL17Q9BXU8 183 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 TDRD3Q9H7E2 651 aaKnown RBP4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 CCNB1IP1Q9NPC3 277 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 SDHAF2Q9NX18 166 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 IMPAD1Q9NX62 359 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms