RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 THAP11Q96EK4 314 aa10.97□□□□□ -0.65
CPNE1-222ENST00000473373 C10orf90Q96M02 699 aa10.97□□□□□ -0.65
CPNE1-222ENST00000473373 ZNF285Q96NJ3 590 aa10.97□□□□□ -0.65
CPNE1-222ENST00000473373 OR2A5Q96R48 311 aa10.97□□□□□ -0.65
CPNE1-222ENST00000473373 RBBP8Q99708 897 aa10.97□□□□□ -0.65
CPNE1-222ENST00000473373 LRRC1Q9BTT6 524 aa10.97□□□□□ -0.65
CPNE1-222ENST00000473373 CAB39LQ9H9S4 337 aa10.97□□□□□ -0.65
CPNE1-222ENST00000473373 PLAC1Q9HBJ0 212 aa10.97□□□□□ -0.65
CPNE1-222ENST00000473373 ANKHQ9HCJ1 492 aa10.97□□□□□ -0.65
CPNE1-222ENST00000473373 C14orf105Q9NVL8 296 aa10.97□□□□□ -0.65
CPNE1-222ENST00000473373 GRHL1Q9NZI5 618 aa10.97□□□□□ -0.65
CPNE1-222ENST00000473373 FBXL4Q9UKA2 621 aa10.97□□□□□ -0.65
CPNE1-222ENST00000473373 CLGNO14967 610 aa10.96□□□□□ -0.65
CPNE1-222ENST00000473373 P2RX6O15547 441 aa10.96□□□□□ -0.65
CPNE1-222ENST00000473373 PHGDHO43175 533 aaKnown RBP10.96□□□□□ -0.65
CPNE1-222ENST00000473373 NDUFS4O43181 175 aa10.96□□□□□ -0.65
CPNE1-222ENST00000473373 CNOT3O75175 753 aaKnown RBP10.96□□□□□ -0.65
CPNE1-222ENST00000473373 ALOX12BO75342 701 aa10.96□□□□□ -0.65
CPNE1-222ENST00000473373 H2AFYO75367 372 aaKnown RBP10.96□□□□□ -0.65
CPNE1-222ENST00000473373 IPO13O94829 963 aaKnown RBP10.96□□□□□ -0.65
CPNE1-222ENST00000473373 UMODP07911 640 aa10.96□□□□□ -0.65
CPNE1-222ENST00000473373 CCDC166P0CW27 439 aa10.96□□□□□ -0.65
CPNE1-222ENST00000473373 IL1RNP18510 177 aa10.96□□□□□ -0.65
CPNE1-222ENST00000473373 EMP2P54851 167 aa10.96□□□□□ -0.65
CPNE1-222ENST00000473373 EMP3P54852 163 aa10.96□□□□□ -0.65
CPNE1-222ENST00000473373 CSNK1G2P78368 415 aa10.96□□□□□ -0.65
CPNE1-222ENST00000473373 RGS1Q08116 209 aa10.96□□□□□ -0.65
CPNE1-222ENST00000473373 DSG2Q14126 1118 aa10.96□□□□□ -0.65
CPNE1-222ENST00000473373 UBAP2LQ14157 1087 aaKnown RBP10.96□□□□□ -0.65
CPNE1-222ENST00000473373 RBBP5Q15291 538 aaKnown RBP10.96□□□□□ -0.65
CPNE1-222ENST00000473373 TSNQ15631 228 aaKnown RBP10.96□□□□□ -0.65
CPNE1-222ENST00000473373 IGFBP7Q16270 282 aa10.96□□□□□ -0.65
CPNE1-222ENST00000473373 PRTGQ2VWP7 1150 aa10.96□□□□□ -0.65
CPNE1-222ENST00000473373 KBTBD12Q3ZCT8 623 aa10.96□□□□□ -0.65
CPNE1-222ENST00000473373 MINDY4Q4G0A6 757 aa10.96□□□□□ -0.65
CPNE1-222ENST00000473373 GRTP1Q5TC63 336 aa10.96□□□□□ -0.65
CPNE1-222ENST00000473373 VWA5B1Q5TIE3 1220 aa10.96□□□□□ -0.65
CPNE1-222ENST00000473373 PPP1R32Q7Z5V6 425 aa10.96□□□□□ -0.65
CPNE1-222ENST00000473373 TBC1D1Q86TI0 1168 aaPredicted RBP10.96□□□□□ -0.65
CPNE1-222ENST00000473373 THOC6Q86W42 341 aaKnown RBP10.96□□□□□ -0.65
CPNE1-222ENST00000473373 ATCAYQ86WG3 371 aa10.96□□□□□ -0.65
CPNE1-222ENST00000473373 LRRC56Q8IYG6 542 aaPredicted RBP10.96□□□□□ -0.65
CPNE1-222ENST00000473373 KIF18AQ8NI77 898 aa10.96□□□□□ -0.65
CPNE1-222ENST00000473373 FBF1Q8TES7 1133 aa10.96□□□□□ -0.65
CPNE1-222ENST00000473373 SLC5A11Q8WWX8 675 aa10.96□□□□□ -0.65
CPNE1-222ENST00000473373 IFT81Q8WYA0 676 aa10.96□□□□□ -0.65
CPNE1-222ENST00000473373 PDLIM5Q96HC4 596 aaKnown RBP10.96□□□□□ -0.65
CPNE1-222ENST00000473373 SPSB2Q99619 263 aa10.96□□□□□ -0.65
CPNE1-222ENST00000473373 MACROD1Q9BQ69 325 aa10.96□□□□□ -0.65
CPNE1-222ENST00000473373 AIF1LQ9BQI0 150 aa10.96□□□□□ -0.65
CPNE1-222ENST00000473373 NUDT9Q9BW91 350 aa10.96□□□□□ -0.65
CPNE1-222ENST00000473373 SLC26A1Q9H2B4 701 aa10.96□□□□□ -0.65
CPNE1-222ENST00000473373 POPDC3Q9HBV1 291 aa10.96□□□□□ -0.65
CPNE1-222ENST00000473373 MKKSQ9NPJ1 570 aaPredicted RBP10.96□□□□□ -0.65
CPNE1-222ENST00000473373 SMYD2Q9NRG4 433 aa10.96□□□□□ -0.65
CPNE1-222ENST00000473373 SLC22A11Q9NSA0 550 aa10.96□□□□□ -0.65
CPNE1-222ENST00000473373 CD274Q9NZQ7 290 aa10.96□□□□□ -0.65
CPNE1-222ENST00000473373 LUZP4Q9P127 313 aa10.96□□□□□ -0.65
CPNE1-222ENST00000473373 RNF112Q9ULX5 631 aa10.96□□□□□ -0.65
CPNE1-222ENST00000473373 NOVA2Q9UNW9 492 aaKnown RBP10.96□□□□□ -0.65
CPNE1-222ENST00000473373 SH2B3Q9UQQ2 575 aa10.96□□□□□ -0.65
CPNE1-222ENST00000473373 MTO1Q9Y2Z2 717 aaKnown RBP10.96□□□□□ -0.65
CPNE1-222ENST00000473373 MAP4K5Q9Y4K4 846 aa10.96□□□□□ -0.65
CPNE1-222ENST00000473373 OARD1Q9Y530 152 aa10.96□□□□□ -0.65
CPNE1-222ENST00000473373 PCDHGB7Q9Y5F8 929 aa10.96□□□□□ -0.65
CPNE1-222ENST00000473373 KCNE2Q9Y6J6 123 aa10.96□□□□□ -0.65
CPNE1-222ENST00000473373 IKBKGQ9Y6K9 419 aa10.96□□□□□ -0.65
CPNE1-222ENST00000473373 TLN1Q9Y490 2541 aaKnown RBP10.96□□□□□ -0.66
CPNE1-222ENST00000473373 NSG1A0A0A6YYJ2 146 aa10.95□□□□□ -0.66
CPNE1-222ENST00000473373 URADA6NGE7 173 aa10.95□□□□□ -0.66
CPNE1-222ENST00000473373 CXorf49A8MYA2 514 aaPredicted RBP10.95□□□□□ -0.66
CPNE1-222ENST00000473373 MASP2O00187 686 aa10.95□□□□□ -0.66
CPNE1-222ENST00000473373 TP73O15350 636 aa10.95□□□□□ -0.66
CPNE1-222ENST00000473373 MED26O95402 600 aa10.95□□□□□ -0.66
CPNE1-222ENST00000473373 TSPAN12O95859 305 aa10.95□□□□□ -0.66
CPNE1-222ENST00000473373 TUBB4AP04350 444 aa10.95□□□□□ -0.66
CPNE1-222ENST00000473373 NPPBP16860 134 aa10.95□□□□□ -0.66
CPNE1-222ENST00000473373 BCL6P41182 706 aa10.95□□□□□ -0.66
CPNE1-222ENST00000473373 HNMTP50135 292 aa10.95□□□□□ -0.66
CPNE1-222ENST00000473373 MLLT10P55197 1068 aa10.95□□□□□ -0.66
CPNE1-222ENST00000473373 MAT1AQ00266 395 aaKnown RBP10.95□□□□□ -0.66
CPNE1-222ENST00000473373 RELAQ04206 551 aa10.95□□□□□ -0.66
CPNE1-222ENST00000473373 EEF1A2Q05639 463 aaKnown RBP10.95□□□□□ -0.66
CPNE1-222ENST00000473373 FAM53BQ14153 422 aa10.95□□□□□ -0.66
CPNE1-222ENST00000473373 MYBPC3Q14896 1274 aa10.95□□□□□ -0.66
CPNE1-222ENST00000473373 SYT16Q17RD7 645 aa10.95□□□□□ -0.66
CPNE1-222ENST00000473373 NADK2Q4G0N4 442 aa10.95□□□□□ -0.66
CPNE1-222ENST00000473373 SBSNQ6UWP8 590 aa10.95□□□□□ -0.66
CPNE1-222ENST00000473373 TMEM207Q6UWW9 146 aa10.95□□□□□ -0.66
CPNE1-222ENST00000473373 ZNF572Q7Z3I7 529 aaPredicted RBP10.95□□□□□ -0.66
CPNE1-222ENST00000473373 GPSM1Q86YR5 675 aa10.95□□□□□ -0.66
CPNE1-222ENST00000473373 HPS6Q86YV9 775 aa10.95□□□□□ -0.66
CPNE1-222ENST00000473373 CEP97Q8IW35 865 aa10.95□□□□□ -0.66
CPNE1-222ENST00000473373 SPATA6LQ8N4H0 392 aa10.95□□□□□ -0.66
CPNE1-222ENST00000473373 ZADH2Q8N4Q0 377 aa10.95□□□□□ -0.66
CPNE1-222ENST00000473373 SNX31Q8N9S9 440 aa10.95□□□□□ -0.66
CPNE1-222ENST00000473373 OR9A4Q8NGU2 314 aa10.95□□□□□ -0.66
CPNE1-222ENST00000473373 OR56A3Q8NH54 315 aa10.95□□□□□ -0.66
CPNE1-222ENST00000473373 THOC3Q96J01 351 aaKnown RBP10.95□□□□□ -0.66
CPNE1-222ENST00000473373 SGPP1Q9BX95 441 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms