RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 TSPAN17Q96FV3 270 aa21.41■■□□□ 1.02
PTP4A1-203ENST00000473334 OR4K3Q96R72 315 aa21.41■■□□□ 1.02
PTP4A1-203ENST00000473334 RBBP8Q99708 897 aa21.41■■□□□ 1.02
PTP4A1-203ENST00000473334 FAM129AQ9BZQ8 928 aa21.41■■□□□ 1.02
PTP4A1-203ENST00000473334 ZNF552Q9H707 407 aaPredicted RBP21.41■■□□□ 1.02
PTP4A1-203ENST00000473334 CTNNAL1Q9UBT7 734 aa21.41■■□□□ 1.02
PTP4A1-203ENST00000473334 MTO1Q9Y2Z2 717 aaKnown RBP21.41■■□□□ 1.02
PTP4A1-203ENST00000473334 MRPS2Q9Y399 296 aaKnown RBP21.41■■□□□ 1.02
PTP4A1-203ENST00000473334 OARD1Q9Y530 152 aa21.41■■□□□ 1.02
PTP4A1-203ENST00000473334 FFAR3O14843 346 aa21.4■■□□□ 1.02
PTP4A1-203ENST00000473334 GPR42O15529 346 aa21.4■■□□□ 1.02
PTP4A1-203ENST00000473334 LCMT2O60294 686 aaKnown RBP21.4■■□□□ 1.02
PTP4A1-203ENST00000473334 ALOX12BO75342 701 aa21.4■■□□□ 1.02
PTP4A1-203ENST00000473334 URI1O94763 535 aaPredicted RBP21.4■■□□□ 1.02
PTP4A1-203ENST00000473334 IPO13O94829 963 aaKnown RBP21.4■■□□□ 1.02
PTP4A1-203ENST00000473334 ITGA3P26006 1051 aa21.4■■□□□ 1.02
PTP4A1-203ENST00000473334 GP5P40197 560 aa21.4■■□□□ 1.02
PTP4A1-203ENST00000473334 MLLT10P55197 1068 aa21.4■■□□□ 1.02
PTP4A1-203ENST00000473334 TRADDQ15628 312 aa21.4■■□□□ 1.02
PTP4A1-203ENST00000473334 IGFBP7Q16270 282 aa21.4■■□□□ 1.02
PTP4A1-203ENST00000473334 TMEM214Q6NUQ4 689 aaKnown RBP21.4■■□□□ 1.02
PTP4A1-203ENST00000473334 FRA10AC1Q70Z53 315 aa21.4■■□□□ 1.02
PTP4A1-203ENST00000473334 ADAMTSL2Q86TH1 951 aa21.4■■□□□ 1.02
PTP4A1-203ENST00000473334 ASPGQ86U10 573 aa21.4■■□□□ 1.02
PTP4A1-203ENST00000473334 RBMXL3Q8N7X1 1067 aaKnown RBP21.4■■□□□ 1.02
PTP4A1-203ENST00000473334 MFSD9Q8NBP5 474 aa21.4■■□□□ 1.02
PTP4A1-203ENST00000473334 OR4K1Q8NGD4 311 aa21.4■■□□□ 1.02
PTP4A1-203ENST00000473334 GPR22Q99680 433 aa21.4■■□□□ 1.02
PTP4A1-203ENST00000473334 SARGQ9BW04 601 aa21.4■■□□□ 1.02
PTP4A1-203ENST00000473334 TGIF2Q9GZN2 237 aa21.4■■□□□ 1.02
PTP4A1-203ENST00000473334 IDSB3KWA1 339 aa21.39■■□□□ 1.01
PTP4A1-203ENST00000473334 H0YIG0 161 aa21.39■■□□□ 1.01
PTP4A1-203ENST00000473334 MAP2K7O14733 419 aa21.39■■□□□ 1.01
PTP4A1-203ENST00000473334 SORBS2O94875 1100 aaKnown RBP21.39■■□□□ 1.01
PTP4A1-203ENST00000473334 NSA2O95478 260 aaKnown RBP21.39■■□□□ 1.01
PTP4A1-203ENST00000473334 C1QAP02745 245 aa21.39■■□□□ 1.01
PTP4A1-203ENST00000473334 ACPPP15309 386 aa21.39■■□□□ 1.01
PTP4A1-203ENST00000473334 MAGEA4P43358 317 aa21.39■■□□□ 1.01
PTP4A1-203ENST00000473334 EMP2P54851 167 aa21.39■■□□□ 1.01
PTP4A1-203ENST00000473334 SNRPNP63162 240 aaKnown RBP21.39■■□□□ 1.01
PTP4A1-203ENST00000473334 USP10Q14694 798 aaKnown RBP21.39■■□□□ 1.01
PTP4A1-203ENST00000473334 TSNQ15631 228 aaKnown RBP21.39■■□□□ 1.01
PTP4A1-203ENST00000473334 JMJD6Q6NYC1 403 aaPredicted RBP21.39■■□□□ 1.01
PTP4A1-203ENST00000473334 LAPTM4BQ86VI4 370 aa21.39■■□□□ 1.01
PTP4A1-203ENST00000473334 CTAGE3PQ8IX95 158 aa21.39■■□□□ 1.01
PTP4A1-203ENST00000473334 OR9A4Q8NGU2 314 aa21.39■■□□□ 1.01
PTP4A1-203ENST00000473334 SLC13A3Q8WWT9 602 aa21.39■■□□□ 1.01
PTP4A1-203ENST00000473334 SLC5A11Q8WWX8 675 aa21.39■■□□□ 1.01
PTP4A1-203ENST00000473334 MIB2Q96AX9 1013 aa21.39■■□□□ 1.01
PTP4A1-203ENST00000473334 EGFL8Q99944 293 aa21.39■■□□□ 1.01
PTP4A1-203ENST00000473334 MACROD1Q9BQ69 325 aa21.39■■□□□ 1.01
PTP4A1-203ENST00000473334 DERL2Q9GZP9 239 aa21.39■■□□□ 1.01
PTP4A1-203ENST00000473334 CAB39LQ9H9S4 337 aa21.39■■□□□ 1.01
PTP4A1-203ENST00000473334 DYRK1BQ9Y463 629 aa21.39■■□□□ 1.01
PTP4A1-203ENST00000473334 TRBC2A0A5B9 178 aa21.38■■□□□ 1.01
PTP4A1-203ENST00000473334 TTLL8A6PVC2 850 aa21.38■■□□□ 1.01
PTP4A1-203ENST00000473334 WISP3O95389 354 aaPredicted RBP21.38■■□□□ 1.01
PTP4A1-203ENST00000473334 HPP00738 406 aa21.38■■□□□ 1.01
PTP4A1-203ENST00000473334 SLC35G6P0C7Q6 338 aa21.38■■□□□ 1.01
PTP4A1-203ENST00000473334 SLC7A5Q01650 507 aa21.38■■□□□ 1.01
PTP4A1-203ENST00000473334 MEF2AQ02078 507 aaPredicted RBP21.38■■□□□ 1.01
PTP4A1-203ENST00000473334 CSHL1Q14406 222 aa21.38■■□□□ 1.01
PTP4A1-203ENST00000473334 SYT16Q17RD7 645 aa21.38■■□□□ 1.01
PTP4A1-203ENST00000473334 WHAMMP3Q1A5X7 153 aa21.38■■□□□ 1.01
PTP4A1-203ENST00000473334 ATG9BQ674R7 924 aa21.38■■□□□ 1.01
PTP4A1-203ENST00000473334 SLC6A19Q695T7 634 aa21.38■■□□□ 1.01
PTP4A1-203ENST00000473334 THOC6Q86W42 341 aaKnown RBP21.38■■□□□ 1.01
PTP4A1-203ENST00000473334 ZC3H7AQ8IWR0 971 aaKnown RBP21.38■■□□□ 1.01
PTP4A1-203ENST00000473334 TBC1D19Q8N5T2 526 aa21.38■■□□□ 1.01
PTP4A1-203ENST00000473334 NEIL2Q969S2 332 aa21.38■■□□□ 1.01
PTP4A1-203ENST00000473334 PNPLA2Q96AD5 504 aa21.38■■□□□ 1.01
PTP4A1-203ENST00000473334 MFRPQ9BY79 579 aa21.38■■□□□ 1.01
PTP4A1-203ENST00000473334 LRRC4CQ9HCJ2 640 aa21.38■■□□□ 1.01
PTP4A1-203ENST00000473334 PLAAQ9Y263 795 aa21.38■■□□□ 1.01
PTP4A1-203ENST00000473334 DOCK10Q96BY6 2186 aa21.38■■□□□ 1.01
PTP4A1-203ENST00000473334 ESYT3A0FGR9 886 aa21.37■■□□□ 1.01
PTP4A1-203ENST00000473334 PCDH17O14917 1159 aa21.37■■□□□ 1.01
PTP4A1-203ENST00000473334 HEXBP07686 556 aa21.37■■□□□ 1.01
PTP4A1-203ENST00000473334 STMN1P16949 149 aa21.37■■□□□ 1.01
PTP4A1-203ENST00000473334 IL1RNP18510 177 aa21.37■■□□□ 1.01
PTP4A1-203ENST00000473334 STX2P32856 288 aa21.37■■□□□ 1.01
PTP4A1-203ENST00000473334 HNMTP50135 292 aa21.37■■□□□ 1.01
PTP4A1-203ENST00000473334 MAT1AQ00266 395 aaKnown RBP21.37■■□□□ 1.01
PTP4A1-203ENST00000473334 KBTBD12Q3ZCT8 623 aa21.37■■□□□ 1.01
PTP4A1-203ENST00000473334 CATSPEREQ5SY80 951 aa21.37■■□□□ 1.01
PTP4A1-203ENST00000473334 IRAK1BP1Q5VVH5 260 aa21.37■■□□□ 1.01
PTP4A1-203ENST00000473334 IGFL3Q6UXB1 125 aa21.37■■□□□ 1.01
PTP4A1-203ENST00000473334 PRSS41Q7RTY9 318 aa21.37■■□□□ 1.01
PTP4A1-203ENST00000473334 KCT2Q8NC54 265 aa21.37■■□□□ 1.01
PTP4A1-203ENST00000473334 ZCCHC10Q8TBK6 192 aa21.37■■□□□ 1.01
PTP4A1-203ENST00000473334 TM9SF4Q92544 642 aa21.37■■□□□ 1.01
PTP4A1-203ENST00000473334 C8orf44Q96CB5 159 aa21.37■■□□□ 1.01
PTP4A1-203ENST00000473334 TSNARE1Q96NA8 513 aa21.37■■□□□ 1.01
PTP4A1-203ENST00000473334 MESP1Q9BRJ9 268 aa21.37■■□□□ 1.01
PTP4A1-203ENST00000473334 LRRC1Q9BTT6 524 aa21.37■■□□□ 1.01
PTP4A1-203ENST00000473334 ANKHQ9HCJ1 492 aa21.37■■□□□ 1.01
PTP4A1-203ENST00000473334 PHGDHO43175 533 aaKnown RBP21.36■■□□□ 1.01
PTP4A1-203ENST00000473334 OR1F1O43749 312 aa21.36■■□□□ 1.01
PTP4A1-203ENST00000473334 CCDC166P0CW27 439 aa21.36■■□□□ 1.01
PTP4A1-203ENST00000473334 CXCR2P25025 360 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms