RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 LMNTD1Q8N9Z9 388 aa20.4■□□□□ 0.86
COL18A1-207ENST00000473212 L3MBTL4Q8NA19 623 aa20.4■□□□□ 0.86
COL18A1-207ENST00000473212 SCAMP4Q969E2 229 aa20.4■□□□□ 0.86
COL18A1-207ENST00000473212 IGSF21Q96ID5 467 aa20.4■□□□□ 0.86
COL18A1-207ENST00000473212 ZDHHC3Q9NYG2 299 aa20.4■□□□□ 0.86
COL18A1-207ENST00000473212 AGAP14A8MT82 685 aa20.39■□□□□ 0.85
COL18A1-207ENST00000473212 EFEMP2O95967 443 aa20.39■□□□□ 0.85
COL18A1-207ENST00000473212 DBTP11182 482 aaKnown RBP20.39■□□□□ 0.85
COL18A1-207ENST00000473212 TNFRSF1BP20333 461 aa20.39■□□□□ 0.85
COL18A1-207ENST00000473212 FOXD4Q12950 439 aaPredicted RBP20.39■□□□□ 0.85
COL18A1-207ENST00000473212 IQCCQ4KMZ1 466 aa20.39■□□□□ 0.85
COL18A1-207ENST00000473212 KIAA1958Q8N8K9 716 aa20.39■□□□□ 0.85
COL18A1-207ENST00000473212 HRASLS5Q96KN8 279 aa20.39■□□□□ 0.85
COL18A1-207ENST00000473212 TMEM175Q9BSA9 504 aa20.39■□□□□ 0.85
COL18A1-207ENST00000473212 METTL15A6NJ78 407 aa20.38■□□□□ 0.85
COL18A1-207ENST00000473212 HIST1H2AGP0C0S8 130 aaPredicted RBP20.38■□□□□ 0.85
COL18A1-207ENST00000473212 LAMP1P11279 417 aa20.38■□□□□ 0.85
COL18A1-207ENST00000473212 HIST1H2ADP20671 130 aa20.38■□□□□ 0.85
COL18A1-207ENST00000473212 SLC6A12P48065 614 aa20.38■□□□□ 0.85
COL18A1-207ENST00000473212 TM4SF4P48230 202 aa20.38■□□□□ 0.85
COL18A1-207ENST00000473212 LILRA3Q8N6C8 439 aaPredicted RBP20.38■□□□□ 0.85
COL18A1-207ENST00000473212 CSGALNACT1Q8TDX6 532 aa20.38■□□□□ 0.85
COL18A1-207ENST00000473212 SH3KBP1Q96B97 665 aa20.38■□□□□ 0.85
COL18A1-207ENST00000473212 HIST1H2AHQ96KK5 128 aa20.38■□□□□ 0.85
COL18A1-207ENST00000473212 C7orf34Q96L11 122 aa20.38■□□□□ 0.85
COL18A1-207ENST00000473212 HIST1H2AJQ99878 128 aa20.38■□□□□ 0.85
COL18A1-207ENST00000473212 H2AFJQ9BTM1 129 aa20.38■□□□□ 0.85
COL18A1-207ENST00000473212 MMP27Q9H306 513 aa20.38■□□□□ 0.85
COL18A1-207ENST00000473212 RUBCNLQ9H714 662 aa20.38■□□□□ 0.85
COL18A1-207ENST00000473212 ANKHQ9HCJ1 492 aa20.38■□□□□ 0.85
COL18A1-207ENST00000473212 TMEM184CQ9NVA4 438 aa20.38■□□□□ 0.85
COL18A1-207ENST00000473212 ABT1Q9ULW3 272 aaKnown RBP20.38■□□□□ 0.85
COL18A1-207ENST00000473212 ETHE1O95571 254 aa20.38■□□□□ 0.85
COL18A1-207ENST00000473212 RRM2P31350 389 aa20.38■□□□□ 0.85
COL18A1-207ENST00000473212 SLC19A1P41440 591 aa20.38■□□□□ 0.85
COL18A1-207ENST00000473212 TUBA1BP68363 451 aa20.38■□□□□ 0.85
COL18A1-207ENST00000473212 SRSF11Q05519 484 aaKnown RBP20.38■□□□□ 0.85
COL18A1-207ENST00000473212 CDC20Q12834 499 aa20.38■□□□□ 0.85
COL18A1-207ENST00000473212 TIGD6Q17RP2 521 aa20.38■□□□□ 0.85
COL18A1-207ENST00000473212 CCSMST1Q4G0I0 132 aa20.38■□□□□ 0.85
COL18A1-207ENST00000473212 STEAP3Q658P3 488 aa20.38■□□□□ 0.85
COL18A1-207ENST00000473212 TUBA1AQ71U36 451 aa20.38■□□□□ 0.85
COL18A1-207ENST00000473212 LACC1Q8IV20 430 aa20.38■□□□□ 0.85
COL18A1-207ENST00000473212 CMTM8Q8IZV2 173 aa20.38■□□□□ 0.85
COL18A1-207ENST00000473212 POC5Q8NA72 575 aa20.38■□□□□ 0.85
COL18A1-207ENST00000473212 OR2AP1Q8NGE2 309 aa20.38■□□□□ 0.85
COL18A1-207ENST00000473212 ASB11Q8WXH4 323 aa20.38■□□□□ 0.85
COL18A1-207ENST00000473212 SLC12A9Q9BXP2 914 aa20.38■□□□□ 0.85
COL18A1-207ENST00000473212 ZDHHC6Q9H6R6 413 aa20.38■□□□□ 0.85
COL18A1-207ENST00000473212 TPT1P8Q9HAU6 139 aa20.38■□□□□ 0.85
COL18A1-207ENST00000473212 POU2F3Q9UKI9 436 aa20.38■□□□□ 0.85
COL18A1-207ENST00000473212 BACE2Q9Y5Z0 518 aa20.38■□□□□ 0.85
COL18A1-207ENST00000473212 PABPN1LA6NDY0 278 aaKnown RBP20.37■□□□□ 0.85
COL18A1-207ENST00000473212 AGAP5A6NIR3 686 aa20.37■□□□□ 0.85
COL18A1-207ENST00000473212 A8MU76 341 aa20.37■□□□□ 0.85
COL18A1-207ENST00000473212 C1SP09871 688 aa20.37■□□□□ 0.85
COL18A1-207ENST00000473212 SRCP12931 536 aa20.37■□□□□ 0.85
COL18A1-207ENST00000473212 SERPINA4P29622 427 aa20.37■□□□□ 0.85
COL18A1-207ENST00000473212 HNRNPFP52597 415 aaKnown RBP20.37■□□□□ 0.85
COL18A1-207ENST00000473212 KCNJ10P78508 379 aa20.37■□□□□ 0.85
COL18A1-207ENST00000473212 CDKL4Q5MAI5 379 aa20.37■□□□□ 0.85
COL18A1-207ENST00000473212 GPR155Q7Z3F1 870 aa20.37■□□□□ 0.85
COL18A1-207ENST00000473212 HOMEZQ8IX15 550 aa20.37■□□□□ 0.85
COL18A1-207ENST00000473212 SP140LQ9H930 580 aa20.37■□□□□ 0.85
COL18A1-207ENST00000473212 IL21Q9HBE4 155 aa20.37■□□□□ 0.85
COL18A1-207ENST00000473212 CFAP97Q9P2B7 532 aa20.37■□□□□ 0.85
COL18A1-207ENST00000473212 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.37■□□□□ 0.85
COL18A1-207ENST00000473212 E9PQ18 207 aa20.37■□□□□ 0.85
COL18A1-207ENST00000473212 OXSR1O95747 527 aaPredicted RBP20.37■□□□□ 0.85
COL18A1-207ENST00000473212 IGSF6O95976 241 aa20.37■□□□□ 0.85
COL18A1-207ENST00000473212 ACPPP15309 386 aa20.37■□□□□ 0.85
COL18A1-207ENST00000473212 MAGP20916 626 aa20.37■□□□□ 0.85
COL18A1-207ENST00000473212 UGT2B10P36537 528 aa20.37■□□□□ 0.85
COL18A1-207ENST00000473212 CTSKP43235 329 aa20.37■□□□□ 0.85
COL18A1-207ENST00000473212 PFN3P60673 137 aa20.37■□□□□ 0.85
COL18A1-207ENST00000473212 ELP6Q0PNE2 266 aa20.37■□□□□ 0.85
COL18A1-207ENST00000473212 ABRQ12979 859 aa20.37■□□□□ 0.85
COL18A1-207ENST00000473212 SYNPOQ8N3V7 929 aa20.37■□□□□ 0.85
COL18A1-207ENST00000473212 FAM83FQ8NEG4 500 aaPredicted RBP20.37■□□□□ 0.85
COL18A1-207ENST00000473212 EPYCQ99645 322 aa20.37■□□□□ 0.85
COL18A1-207ENST00000473212 CORO1BQ9BR76 489 aa20.37■□□□□ 0.85
COL18A1-207ENST00000473212 MRPL9Q9BYD2 267 aaKnown RBP20.37■□□□□ 0.85
COL18A1-207ENST00000473212 MIR1-1HGQ9H1L0 117 aa20.37■□□□□ 0.85
COL18A1-207ENST00000473212 RNF167Q9H6Y7 350 aa20.37■□□□□ 0.85
COL18A1-207ENST00000473212 CPNE5Q9HCH3 593 aa20.37■□□□□ 0.85
COL18A1-207ENST00000473212 PSORS1C1Q9UIG5 152 aa20.37■□□□□ 0.85
COL18A1-207ENST00000473212 OR2AG2A6NM03 316 aa20.36■□□□□ 0.85
COL18A1-207ENST00000473212 DLGAP3O95886 979 aa20.36■□□□□ 0.85
COL18A1-207ENST00000473212 CKMP06732 381 aa20.36■□□□□ 0.85
COL18A1-207ENST00000473212 GRK5P34947 590 aa20.36■□□□□ 0.85
COL18A1-207ENST00000473212 NUDT6P53370 316 aa20.36■□□□□ 0.85
COL18A1-207ENST00000473212 BCL2A1Q16548 175 aa20.36■□□□□ 0.85
COL18A1-207ENST00000473212 CCDC92Q53HC0 331 aaPredicted RBP20.36■□□□□ 0.85
COL18A1-207ENST00000473212 SOWAHCQ53LP3 525 aaPredicted RBP20.36■□□□□ 0.85
COL18A1-207ENST00000473212 TTC23LQ6PF05 361 aa20.36■□□□□ 0.85
COL18A1-207ENST00000473212 TPRG1Q6ZUI0 275 aa20.36■□□□□ 0.85
COL18A1-207ENST00000473212 FAM124AQ86V42 546 aa20.36■□□□□ 0.85
COL18A1-207ENST00000473212 CHST14Q8NCH0 376 aa20.36■□□□□ 0.85
COL18A1-207ENST00000473212 STARD8Q92502 1023 aa20.36■□□□□ 0.85
COL18A1-207ENST00000473212 FCGR1BQ92637 280 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms