RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 LRRD1A4D1F6 860 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 ANKUB1A6NFN9 424 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 MGAT4DA6NG13 374 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 CXorf49A8MYA2 514 aaPredicted RBP3.38□□□□□ -1.87
XRN1-209ENST00000472625 C2orf74A8MZ97 194 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 PCDH17O14917 1159 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 ZNF185O15231 689 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 STX7O15400 261 aaKnown RBP3.38□□□□□ -1.87
XRN1-209ENST00000472625 PRAMEF4O60810 478 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 PMPCBO75439 489 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 ANXA9O76027 345 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 PRSS23O95084 383 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 ZRANB2O95218 330 aaKnown RBP eCLIP3.38□□□□□ -1.87
XRN1-209ENST00000472625 MLYCDO95822 493 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 EML2O95834 649 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 RPN2P04844 631 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 CYP1A2P05177 515 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 EBLN1P0CF75 366 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 ITGALP20701 1170 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 CDH3P22223 829 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 FDXRP22570 491 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 F8A1P23610 371 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 ITGA3P26006 1051 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 IL1R2P27930 398 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 SHMT2P34897 504 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 PTGER4P35408 488 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 GJC1P36383 396 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 ANP32AP39687 249 aaKnown RBP3.38□□□□□ -1.87
XRN1-209ENST00000472625 FOLR3P41439 243 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 SLC1A1P43005 524 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 UQCRFS1P47985 274 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 CD151P48509 253 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 CCL11P51671 97 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 DRG2P55039 364 aaKnown RBP3.38□□□□□ -1.87
XRN1-209ENST00000472625 NANOS3P60323 173 aaKnown RBP3.38□□□□□ -1.87
XRN1-209ENST00000472625 ZBED6P86452 979 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 MGAT2Q10469 447 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 TMEM115Q12893 351 aaPredicted RBP3.38□□□□□ -1.87
XRN1-209ENST00000472625 MALLQ13021 153 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 AIMP2Q13155 320 aaKnown RBP3.38□□□□□ -1.87
XRN1-209ENST00000472625 RPA4Q13156 261 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 MPP3Q13368 585 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 IL10RAQ13651 578 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 GALNT3Q14435 633 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 RPE65Q16518 533 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 KYNUQ16719 465 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 BCL7AQ4VC05 210 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 ALKBH5Q6P6C2 394 aaKnown RBP3.38□□□□□ -1.87
XRN1-209ENST00000472625 DRICH1Q6PGQ1 229 aaPredicted RBP3.38□□□□□ -1.87
XRN1-209ENST00000472625 CLEC17AQ6ZS10 378 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 ZNF571Q7Z3V5 609 aaPredicted RBP3.38□□□□□ -1.87
XRN1-209ENST00000472625 RHOT2Q8IXI1 618 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 DSELQ8IZU8 1212 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 EID3Q8N140 333 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 GALNT16Q8N428 558 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 ZADH2Q8N4Q0 377 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 RAB42Q8N4Z0 105 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 ARFGAP1Q8N6T3 406 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 ENDOVQ8N8Q3 282 aaKnown RBP3.38□□□□□ -1.87
XRN1-209ENST00000472625 ST6GALNAC3Q8NDV1 305 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 OR2L2Q8NH16 312 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 ARRDC2Q8TBH0 407 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 HM13Q8TCT9 377 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 PPP4R1Q8TF05 950 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 ZNF480Q8WV37 535 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 TFB1MQ8WVM0 346 aaKnown RBP3.38□□□□□ -1.87
XRN1-209ENST00000472625 UBE2Q2Q8WVN8 375 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 LCN9Q8WX39 176 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 SLC22A18Q96BI1 424 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 ARL8AQ96BM9 186 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 ZNF501Q96CX3 271 aaPredicted RBP3.38□□□□□ -1.87
XRN1-209ENST00000472625 ELMO2Q96JJ3 720 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 LINC00615Q96LM1 132 aaPredicted RBP3.38□□□□□ -1.87
XRN1-209ENST00000472625 C12orf66Q96MD2 445 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 OLFM3Q96PB7 478 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 DMRTA2Q96SC8 542 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 CPPED1Q9BRF8 314 aaPredicted RBP3.38□□□□□ -1.87
XRN1-209ENST00000472625 MLST8Q9BVC4 326 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 TSSK1BQ9BXA7 367 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 PITPNM3Q9BZ71 974 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 THAP2Q9H0W7 228 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 SRMSQ9H3Y6 488 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 MVB12BQ9H7P6 319 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 BCO1Q9HAY6 547 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 CHST11Q9NPF2 352 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 CASS4Q9NQ75 786 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 TXLNGQ9NUQ3 528 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 ETNK2Q9NVF9 386 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 AURKAIP1Q9NWT8 199 aaPredicted RBP3.38□□□□□ -1.87
XRN1-209ENST00000472625 TAS2R14Q9NYV8 317 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 OR6C2Q9NZP2 312 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 OGFRQ9NZT2 677 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 KLHL8Q9P2G9 620 aaPredicted RBP3.38□□□□□ -1.87
XRN1-209ENST00000472625 ZNF624Q9P2J8 865 aaPredicted RBP3.38□□□□□ -1.87
XRN1-209ENST00000472625 FAM153AQ9UHL3 310 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 POLG2Q9UHN1 485 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 SLC24A2Q9UI40 661 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 CRLS1Q9UJA2 301 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 TRHDEQ9UKU6 1024 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 POMT2Q9UKY4 750 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms