RNA–Protein interactions for RNA: ENST00000472524.1

CCDC88B-205, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 2

Gene CCDC88B, Length 779 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-205ENST00000472524 GALNT7Q86SF2 657 aa14.92□□□□□ -0.02
CCDC88B-205ENST00000472524 FAM45AQ8TCE6 357 aa14.92□□□□□ -0.02
CCDC88B-205ENST00000472524 LRRC39Q96DD0 335 aa14.92□□□□□ -0.02
CCDC88B-205ENST00000472524 PDLIM2Q96JY6 352 aa14.92□□□□□ -0.02
CCDC88B-205ENST00000472524 HIST1H2AHQ96KK5 128 aa14.92□□□□□ -0.02
CCDC88B-205ENST00000472524 KRT12Q99456 494 aa14.92□□□□□ -0.02
CCDC88B-205ENST00000472524 OLFM1Q99784 485 aa14.92□□□□□ -0.02
CCDC88B-205ENST00000472524 HIST1H2AJQ99878 128 aa14.92□□□□□ -0.02
CCDC88B-205ENST00000472524 MACROD1Q9BQ69 325 aa14.92□□□□□ -0.02
CCDC88B-205ENST00000472524 WDR77Q9BQA1 342 aaPredicted RBP14.92□□□□□ -0.02
CCDC88B-205ENST00000472524 H2AFJQ9BTM1 129 aa14.92□□□□□ -0.02
CCDC88B-205ENST00000472524 MKKSQ9NPJ1 570 aaPredicted RBP14.92□□□□□ -0.02
CCDC88B-205ENST00000472524 C14orf105Q9NVL8 296 aa14.92□□□□□ -0.02
CCDC88B-205ENST00000472524 CORO1CQ9ULV4 474 aaPredicted RBP14.92□□□□□ -0.02
CCDC88B-205ENST00000472524 NSG1A0A0A6YYJ2 146 aa14.91□□□□□ -0.02
CCDC88B-205ENST00000472524 WIPF3A6NGB9 483 aa14.91□□□□□ -0.02
CCDC88B-205ENST00000472524 EFCAB8A8MWE9 144 aa14.91□□□□□ -0.02
CCDC88B-205ENST00000472524 TSPAN12O95859 305 aa14.91□□□□□ -0.02
CCDC88B-205ENST00000472524 CDH1P12830 882 aa14.91□□□□□ -0.02
CCDC88B-205ENST00000472524 SAT1P21673 171 aa14.91□□□□□ -0.02
CCDC88B-205ENST00000472524 FDXRP22570 491 aa14.91□□□□□ -0.02
CCDC88B-205ENST00000472524 CXCR2P25025 360 aa14.91□□□□□ -0.02
CCDC88B-205ENST00000472524 AVPR1BP47901 424 aa14.91□□□□□ -0.02
CCDC88B-205ENST00000472524 GLRBP48167 497 aa14.91□□□□□ -0.02
CCDC88B-205ENST00000472524 MRPS25P82663 173 aaKnown RBP14.91□□□□□ -0.02
CCDC88B-205ENST00000472524 PDIA2Q13087 525 aaKnown RBP14.91□□□□□ -0.02
CCDC88B-205ENST00000472524 FAM53BQ14153 422 aa14.91□□□□□ -0.02
CCDC88B-205ENST00000472524 FASTKD3Q14CZ7 662 aaKnown RBP14.91□□□□□ -0.02
CCDC88B-205ENST00000472524 ATG9BQ674R7 924 aa14.91□□□□□ -0.02
CCDC88B-205ENST00000472524 LCTLQ6UWM7 567 aa14.91□□□□□ -0.02
CCDC88B-205ENST00000472524 Q6ZS92 163 aa14.91□□□□□ -0.02
CCDC88B-205ENST00000472524 PRSS41Q7RTY9 318 aa14.91□□□□□ -0.02
CCDC88B-205ENST00000472524 CUZD1Q86UP6 607 aa14.91□□□□□ -0.02
CCDC88B-205ENST00000472524 ZC3H7AQ8IWR0 971 aaKnown RBP14.91□□□□□ -0.02
CCDC88B-205ENST00000472524 FBXO36Q8NEA4 188 aa14.91□□□□□ -0.02
CCDC88B-205ENST00000472524 OR9A4Q8NGU2 314 aa14.91□□□□□ -0.02
CCDC88B-205ENST00000472524 ZCCHC10Q8TBK6 192 aa14.91□□□□□ -0.02
CCDC88B-205ENST00000472524 PYCR2Q96C36 320 aa14.91□□□□□ -0.02
CCDC88B-205ENST00000472524 CNDP1Q96KN2 507 aa14.91□□□□□ -0.02
CCDC88B-205ENST00000472524 SGPP1Q9BX95 441 aa14.91□□□□□ -0.02
CCDC88B-205ENST00000472524 EPS8L2Q9H6S3 715 aa14.91□□□□□ -0.02
CCDC88B-205ENST00000472524 ARL15Q9NXU5 204 aa14.91□□□□□ -0.02
CCDC88B-205ENST00000472524 ZFATQ9P243 1243 aa14.91□□□□□ -0.02
CCDC88B-205ENST00000472524 VWA7Q9Y334 891 aa14.91□□□□□ -0.02
CCDC88B-205ENST00000472524 MYO9AB2RTY4 2548 aa14.91□□□□□ -0.02
CCDC88B-205ENST00000472524 DIDO1Q9BTC0 2240 aaKnown RBP14.9□□□□□ -0.02
CCDC88B-205ENST00000472524 FANCGO15287 622 aa14.9□□□□□ -0.02
CCDC88B-205ENST00000472524 GUCA1CO95843 209 aa14.9□□□□□ -0.02
CCDC88B-205ENST00000472524 LDLRP01130 860 aa14.9□□□□□ -0.02
CCDC88B-205ENST00000472524 COX6A1P12074 109 aa14.9□□□□□ -0.02
CCDC88B-205ENST00000472524 IL1RNP18510 177 aa14.9□□□□□ -0.02
CCDC88B-205ENST00000472524 CCND1P24385 295 aa14.9□□□□□ -0.02
CCDC88B-205ENST00000472524 BCL6P41182 706 aa14.9□□□□□ -0.02
CCDC88B-205ENST00000472524 MGAT5Q09328 741 aa14.9□□□□□ -0.02
CCDC88B-205ENST00000472524 CRB2Q5IJ48 1285 aa14.9□□□□□ -0.02
CCDC88B-205ENST00000472524 MFSD4BQ5TF39 518 aa14.9□□□□□ -0.02
CCDC88B-205ENST00000472524 CAPN13Q6MZZ7 669 aaPredicted RBP14.9□□□□□ -0.02
CCDC88B-205ENST00000472524 LINC00696Q6ZRV3 163 aa14.9□□□□□ -0.02
CCDC88B-205ENST00000472524 MAMDC2Q7Z304 686 aaPredicted RBP14.9□□□□□ -0.02
CCDC88B-205ENST00000472524 CAMKVQ8NCB2 501 aa14.9□□□□□ -0.02
CCDC88B-205ENST00000472524 PPP4R1Q8TF05 950 aa14.9□□□□□ -0.02
CCDC88B-205ENST00000472524 TRIM54Q9BYV2 358 aa14.9□□□□□ -0.02
CCDC88B-205ENST00000472524 MKL2Q9ULH7 1088 aa14.9□□□□□ -0.02
CCDC88B-205ENST00000472524 NOVA2Q9UNW9 492 aaKnown RBP14.9□□□□□ -0.02
CCDC88B-205ENST00000472524 NTNG1Q9Y2I2 539 aa14.9□□□□□ -0.02
CCDC88B-205ENST00000472524 SNX24Q9Y343 169 aa14.9□□□□□ -0.02
CCDC88B-205ENST00000472524 PCDHGA10Q9Y5H3 936 aa14.9□□□□□ -0.02
CCDC88B-205ENST00000472524 PSAT1Q9Y617 370 aa14.9□□□□□ -0.02
CCDC88B-205ENST00000472524 KCNE1BA0A087WTH5 132 aa14.89□□□□□ -0.03
CCDC88B-205ENST00000472524 LCMT2O60294 686 aaKnown RBP14.89□□□□□ -0.03
CCDC88B-205ENST00000472524 JRKO75564 520 aa14.89□□□□□ -0.03
CCDC88B-205ENST00000472524 UQCRHP07919 91 aa14.89□□□□□ -0.03
CCDC88B-205ENST00000472524 GRK3P35626 688 aa14.89□□□□□ -0.03
CCDC88B-205ENST00000472524 DCTP40126 519 aa14.89□□□□□ -0.03
CCDC88B-205ENST00000472524 RPL21P46778 160 aaKnown RBP14.89□□□□□ -0.03
CCDC88B-205ENST00000472524 MEF2AQ02078 507 aaPredicted RBP14.89□□□□□ -0.03
CCDC88B-205ENST00000472524 ZNF460Q14592 562 aa14.89□□□□□ -0.03
CCDC88B-205ENST00000472524 IGFL2Q6UWQ7 119 aa14.89□□□□□ -0.03
CCDC88B-205ENST00000472524 ISLR2Q6UXK2 745 aa14.89□□□□□ -0.03
CCDC88B-205ENST00000472524 CAPN12Q6ZSI9 719 aa14.89□□□□□ -0.03
CCDC88B-205ENST00000472524 NDUFAF7Q7L592 441 aa14.89□□□□□ -0.03
CCDC88B-205ENST00000472524 STRA8Q7Z7C7 330 aa14.89□□□□□ -0.03
CCDC88B-205ENST00000472524 ASPGQ86U10 573 aa14.89□□□□□ -0.03
CCDC88B-205ENST00000472524 KBTBD2Q8IY47 623 aa14.89□□□□□ -0.03
CCDC88B-205ENST00000472524 DNAJB14Q8TBM8 379 aa14.89□□□□□ -0.03
CCDC88B-205ENST00000472524 THAP11Q96EK4 314 aa14.89□□□□□ -0.03
CCDC88B-205ENST00000472524 HAUS8Q9BT25 410 aa14.89□□□□□ -0.03
CCDC88B-205ENST00000472524 TGIF2Q9GZN2 237 aa14.89□□□□□ -0.03
CCDC88B-205ENST00000472524 HCN3Q9P1Z3 774 aa14.89□□□□□ -0.03
CCDC88B-205ENST00000472524 PTGFRNQ9P2B2 879 aa14.89□□□□□ -0.03
CCDC88B-205ENST00000472524 IKZF3Q9UKT9 509 aa14.89□□□□□ -0.03
CCDC88B-205ENST00000472524 SLC5A6Q9Y289 635 aa14.89□□□□□ -0.03
CCDC88B-205ENST00000472524 COPG1Q9Y678 874 aaKnown RBP14.89□□□□□ -0.03
CCDC88B-205ENST00000472524 IGHV1-45A0A0A0MS14 117 aa14.88□□□□□ -0.03
CCDC88B-205ENST00000472524 FAM95CA0A1B0GW59 222 aa14.88□□□□□ -0.03
CCDC88B-205ENST00000472524 ANKUB1A6NFN9 424 aa14.88□□□□□ -0.03
CCDC88B-205ENST00000472524 H0YIG0 161 aa14.88□□□□□ -0.03
CCDC88B-205ENST00000472524 SGK494L7N484 410 aa14.88□□□□□ -0.03
CCDC88B-205ENST00000472524 TP73O15350 636 aa14.88□□□□□ -0.03
CCDC88B-205ENST00000472524 KLHL18O94889 574 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms