RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 ERGP11308 486 aa17.86■□□□□ 0.45
SORT1-203ENST00000471996 TFEBP19484 476 aa17.86■□□□□ 0.45
SORT1-203ENST00000471996 RPA3P35244 121 aaPredicted RBP17.86■□□□□ 0.45
SORT1-203ENST00000471996 XCR1P46094 333 aa17.86■□□□□ 0.45
SORT1-203ENST00000471996 CYB561P49447 251 aa17.86■□□□□ 0.45
SORT1-203ENST00000471996 COPS2P61201 443 aa17.86■□□□□ 0.45
SORT1-203ENST00000471996 ACTN3Q08043 901 aaPredicted RBP17.86■□□□□ 0.45
SORT1-203ENST00000471996 SKOR2Q2VWA4 1001 aaPredicted RBP17.86■□□□□ 0.45
SORT1-203ENST00000471996 FASTKD1Q53R41 847 aaKnown RBP17.86■□□□□ 0.45
SORT1-203ENST00000471996 SFT2D3Q587I9 215 aa17.86■□□□□ 0.45
SORT1-203ENST00000471996 SUSD1Q6UWL2 747 aa17.86■□□□□ 0.45
SORT1-203ENST00000471996 ACAD11Q709F0 780 aa17.86■□□□□ 0.45
SORT1-203ENST00000471996 Q71RC1 249 aaPredicted RBP17.86■□□□□ 0.45
SORT1-203ENST00000471996 SMPDL3AQ92484 453 aa17.86■□□□□ 0.45
SORT1-203ENST00000471996 KRT35Q92764 455 aa17.86■□□□□ 0.45
SORT1-203ENST00000471996 MRFAP1L1Q96HT8 127 aa17.86■□□□□ 0.45
SORT1-203ENST00000471996 CHP1Q99653 195 aa17.86■□□□□ 0.45
SORT1-203ENST00000471996 LPAR4Q99677 370 aa17.86■□□□□ 0.45
SORT1-203ENST00000471996 PCYOX1Q9UHG3 505 aa17.86■□□□□ 0.45
SORT1-203ENST00000471996 INTUQ9ULD6 942 aa17.86■□□□□ 0.45
SORT1-203ENST00000471996 EDARQ9UNE0 448 aa17.86■□□□□ 0.45
SORT1-203ENST00000471996 EFR3BQ9Y2G0 817 aa17.86■□□□□ 0.45
SORT1-203ENST00000471996 PRMT5O14744 637 aaPredicted RBP17.85■□□□□ 0.45
SORT1-203ENST00000471996 PJA2O43164 708 aa17.85■□□□□ 0.45
SORT1-203ENST00000471996 TPP2P29144 1249 aaPredicted RBP17.85■□□□□ 0.45
SORT1-203ENST00000471996 ANP32AP39687 249 aaKnown RBP17.85■□□□□ 0.45
SORT1-203ENST00000471996 MEOX1P50221 254 aa17.85■□□□□ 0.45
SORT1-203ENST00000471996 HADHBP55084 474 aaKnown RBP17.85■□□□□ 0.45
SORT1-203ENST00000471996 NUP107P57740 925 aa17.85■□□□□ 0.45
SORT1-203ENST00000471996 PRDX1Q06830 199 aaKnown RBP17.85■□□□□ 0.45
SORT1-203ENST00000471996 USP10Q14694 798 aaKnown RBP17.85■□□□□ 0.45
SORT1-203ENST00000471996 CMPK2Q5EBM0 449 aa17.85■□□□□ 0.45
SORT1-203ENST00000471996 EMC4Q5J8M3 183 aa17.85■□□□□ 0.45
SORT1-203ENST00000471996 PTRHD1Q6GMV3 140 aaKnown RBP17.85■□□□□ 0.45
SORT1-203ENST00000471996 PCGF5Q86SE9 256 aa17.85■□□□□ 0.45
SORT1-203ENST00000471996 MYRIPQ8NFW9 859 aa17.85■□□□□ 0.45
SORT1-203ENST00000471996 OR6P1Q8NGX9 317 aa17.85■□□□□ 0.45
SORT1-203ENST00000471996 C16orf52Q8NHV5 167 aa17.85■□□□□ 0.45
SORT1-203ENST00000471996 TMEM125Q96AQ2 219 aa17.85■□□□□ 0.45
SORT1-203ENST00000471996 RMND5BQ96G75 393 aaPredicted RBP17.85■□□□□ 0.45
SORT1-203ENST00000471996 CCDC42Q96M95 316 aa17.85■□□□□ 0.45
SORT1-203ENST00000471996 PANX3Q96QZ0 392 aa17.85■□□□□ 0.45
SORT1-203ENST00000471996 MDFIQ99750 246 aa17.85■□□□□ 0.45
SORT1-203ENST00000471996 SMR3AQ99954 134 aa17.85■□□□□ 0.45
SORT1-203ENST00000471996 CLEC4MQ9H2X3 399 aaPredicted RBP17.85■□□□□ 0.45
SORT1-203ENST00000471996 PLSCR2Q9NRY7 297 aa17.85■□□□□ 0.45
SORT1-203ENST00000471996 ZNHIT6Q9NWK9 470 aaKnown RBP17.85■□□□□ 0.45
SORT1-203ENST00000471996 R3HDM2Q9Y2K5 976 aaKnown RBP17.85■□□□□ 0.45
SORT1-203ENST00000471996 FLNAP21333 2647 aaKnown RBP17.84■□□□□ 0.45
SORT1-203ENST00000471996 KPNA5O15131 536 aa17.84■□□□□ 0.45
SORT1-203ENST00000471996 PSMD3O43242 534 aa17.84■□□□□ 0.45
SORT1-203ENST00000471996 HS6ST1O60243 411 aa17.84■□□□□ 0.45
SORT1-203ENST00000471996 ZNF189O75820 626 aaPredicted RBP17.84■□□□□ 0.45
SORT1-203ENST00000471996 DLX5P56178 289 aa17.84■□□□□ 0.45
SORT1-203ENST00000471996 SLC26A5P58743 744 aa17.84■□□□□ 0.45
SORT1-203ENST00000471996 TPM4P67936 248 aa17.84■□□□□ 0.45
SORT1-203ENST00000471996 ACVR1Q04771 509 aa17.84■□□□□ 0.45
SORT1-203ENST00000471996 TSTD2Q5T7W7 516 aa17.84■□□□□ 0.45
SORT1-203ENST00000471996 ICE2Q659A1 982 aa17.84■□□□□ 0.45
SORT1-203ENST00000471996 ARHGAP11AQ6P4F7 1023 aa17.84■□□□□ 0.45
SORT1-203ENST00000471996 OTOAQ7RTW8 1153 aa17.84■□□□□ 0.45
SORT1-203ENST00000471996 PRSS41Q7RTY9 318 aa17.84■□□□□ 0.45
SORT1-203ENST00000471996 LDB1Q86U70 411 aaPredicted RBP17.84■□□□□ 0.45
SORT1-203ENST00000471996 OR9A1PQ8NGU1 263 aa17.84■□□□□ 0.45
SORT1-203ENST00000471996 MCOLN3Q8TDD5 553 aa17.84■□□□□ 0.45
SORT1-203ENST00000471996 ELP5Q8TE02 316 aa17.84■□□□□ 0.45
SORT1-203ENST00000471996 MBD6Q96DN6 1003 aa17.84■□□□□ 0.45
SORT1-203ENST00000471996 GPATCH1Q9BRR8 931 aaKnown RBP17.84■□□□□ 0.45
SORT1-203ENST00000471996 NHEJ1Q9H9Q4 299 aaPredicted RBP17.84■□□□□ 0.45
SORT1-203ENST00000471996 HCN3Q9P1Z3 774 aa17.84■□□□□ 0.45
SORT1-203ENST00000471996 TAC3Q9UHF0 121 aa17.84■□□□□ 0.45
SORT1-203ENST00000471996 RIMKLBQ9ULI2 386 aa17.84■□□□□ 0.45
SORT1-203ENST00000471996 KLF13Q9Y2Y9 288 aaPredicted RBP17.84■□□□□ 0.45
SORT1-203ENST00000471996 AKAP6Q13023 2319 aa17.84■□□□□ 0.45
SORT1-203ENST00000471996 CCNDBP1O95273 360 aa17.83■□□□□ 0.44
SORT1-203ENST00000471996 RFC3P40938 356 aa17.83■□□□□ 0.44
SORT1-203ENST00000471996 BCL6P41182 706 aa17.83■□□□□ 0.44
SORT1-203ENST00000471996 DGKQP52824 942 aa17.83■□□□□ 0.44
SORT1-203ENST00000471996 ITGA8P53708 1063 aa17.83■□□□□ 0.44
SORT1-203ENST00000471996 ABRAXAS2Q15018 415 aa17.83■□□□□ 0.44
SORT1-203ENST00000471996 NSDHLQ15738 373 aa17.83■□□□□ 0.44
SORT1-203ENST00000471996 AARS2Q5JTZ9 985 aaKnown RBP17.83■□□□□ 0.44
SORT1-203ENST00000471996 CAMKMTQ7Z624 323 aa17.83■□□□□ 0.44
SORT1-203ENST00000471996 LINC00523Q86TU6 105 aa17.83■□□□□ 0.44
SORT1-203ENST00000471996 SULF2Q8IWU5 870 aa17.83■□□□□ 0.44
SORT1-203ENST00000471996 PLPP5Q8NEB5 264 aa17.83■□□□□ 0.44
SORT1-203ENST00000471996 OR52K1Q8NGK4 314 aa17.83■□□□□ 0.44
SORT1-203ENST00000471996 ZNF778Q96MU6 729 aa17.83■□□□□ 0.44
SORT1-203ENST00000471996 OSBPL8Q9BZF1 889 aa17.83■□□□□ 0.44
SORT1-203ENST00000471996 RASSF1Q9NS23 344 aa17.83■□□□□ 0.44
SORT1-203ENST00000471996 KLRC4-KLRK1H3BQV0 150 aa17.82■□□□□ 0.44
SORT1-203ENST00000471996 HAT1O14929 419 aa17.82■□□□□ 0.44
SORT1-203ENST00000471996 MATN4O95460 622 aa17.82■□□□□ 0.44
SORT1-203ENST00000471996 MBD3O95983 291 aa17.82■□□□□ 0.44
SORT1-203ENST00000471996 TRHRP34981 398 aaPredicted RBP17.82■□□□□ 0.44
SORT1-203ENST00000471996 PTPN7P35236 360 aa17.82■□□□□ 0.44
SORT1-203ENST00000471996 HLCSP50747 726 aa17.82■□□□□ 0.44
SORT1-203ENST00000471996 PRAMEP78395 509 aa17.82■□□□□ 0.44
SORT1-203ENST00000471996 RHAGQ02094 409 aa17.82■□□□□ 0.44
SORT1-203ENST00000471996 CDH17Q12864 832 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms