RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 ITPR1Q14643 2758 aa18.83■□□□□ 0.61
HDAC7-220ENST00000471235 A0A1W2PPM1 405 aa18.83■□□□□ 0.6
HDAC7-220ENST00000471235 FOXO6A8MYZ6 492 aa18.83■□□□□ 0.6
HDAC7-220ENST00000471235 PRAMEF4O60810 478 aa18.83■□□□□ 0.6
HDAC7-220ENST00000471235 CDH16O75309 829 aa18.83■□□□□ 0.6
HDAC7-220ENST00000471235 TUBBP07437 444 aa18.83■□□□□ 0.6
HDAC7-220ENST00000471235 PYGBP11216 843 aa18.83■□□□□ 0.6
HDAC7-220ENST00000471235 GNAZP19086 355 aa18.83■□□□□ 0.6
HDAC7-220ENST00000471235 EPORP19235 508 aa18.83■□□□□ 0.6
HDAC7-220ENST00000471235 AGXTP21549 392 aa18.83■□□□□ 0.6
HDAC7-220ENST00000471235 EMP3P54852 163 aa18.83■□□□□ 0.6
HDAC7-220ENST00000471235 ALDH18A1P54886 795 aaKnown RBP18.83■□□□□ 0.6
HDAC7-220ENST00000471235 PFKFB4Q16877 469 aa18.83■□□□□ 0.6
HDAC7-220ENST00000471235 FAM214AQ32MH5 1076 aa18.83■□□□□ 0.6
HDAC7-220ENST00000471235 PRAMEF9Q5VWM5 478 aa18.83■□□□□ 0.6
HDAC7-220ENST00000471235 METTL27Q8N6F8 245 aaPredicted RBP18.83■□□□□ 0.6
HDAC7-220ENST00000471235 AIF1LQ9BQI0 150 aa18.83■□□□□ 0.6
HDAC7-220ENST00000471235 MRPL46Q9H2W6 279 aaKnown RBP18.83■□□□□ 0.6
HDAC7-220ENST00000471235 ACTL8Q9H568 366 aa18.83■□□□□ 0.6
HDAC7-220ENST00000471235 OPTCQ9UBM4 332 aa18.83■□□□□ 0.6
HDAC7-220ENST00000471235 KCND3Q9UK17 655 aa18.83■□□□□ 0.6
HDAC7-220ENST00000471235 LRRC14BA6NHZ5 514 aa18.82■□□□□ 0.6
HDAC7-220ENST00000471235 ZNF891A8MT65 544 aaPredicted RBP18.82■□□□□ 0.6
HDAC7-220ENST00000471235 C9J4A7 227 aa18.82■□□□□ 0.6
HDAC7-220ENST00000471235 K7EPI3 171 aa18.82■□□□□ 0.6
HDAC7-220ENST00000471235 TXNDC9O14530 226 aa18.82■□□□□ 0.6
HDAC7-220ENST00000471235 CLGNO14967 610 aa18.82■□□□□ 0.6
HDAC7-220ENST00000471235 OR1F1O43749 312 aa18.82■□□□□ 0.6
HDAC7-220ENST00000471235 KATNA1O75449 491 aa18.82■□□□□ 0.6
HDAC7-220ENST00000471235 RAB40ALP0C0E4 278 aa18.82■□□□□ 0.6
HDAC7-220ENST00000471235 ATXN8OSP0DMR3 200 aa18.82■□□□□ 0.6
HDAC7-220ENST00000471235 C1GALT1C1LP0DN25 315 aa18.82■□□□□ 0.6
HDAC7-220ENST00000471235 ALAS2P22557 587 aa18.82■□□□□ 0.6
HDAC7-220ENST00000471235 SCTRP47872 440 aa18.82■□□□□ 0.6
HDAC7-220ENST00000471235 RPS18P62269 152 aaKnown RBP18.82■□□□□ 0.6
HDAC7-220ENST00000471235 SNRPNP63162 240 aaKnown RBP18.82■□□□□ 0.6
HDAC7-220ENST00000471235 DCDP81605 110 aaKnown RBP18.82■□□□□ 0.6
HDAC7-220ENST00000471235 NFKB2Q00653 900 aa18.82■□□□□ 0.6
HDAC7-220ENST00000471235 SLC9A5Q14940 896 aa18.82■□□□□ 0.6
HDAC7-220ENST00000471235 NCF4Q15080 339 aa18.82■□□□□ 0.6
HDAC7-220ENST00000471235 MUM1Q2TAK8 710 aa18.82■□□□□ 0.6
HDAC7-220ENST00000471235 NKAIN1Q4KMZ8 207 aa18.82■□□□□ 0.6
HDAC7-220ENST00000471235 ATG9BQ674R7 924 aa18.82■□□□□ 0.6
HDAC7-220ENST00000471235 ASPGQ86U10 573 aa18.82■□□□□ 0.6
HDAC7-220ENST00000471235 LCA5Q86VQ0 697 aa18.82■□□□□ 0.6
HDAC7-220ENST00000471235 PTGR2Q8N8N7 351 aaPredicted RBP18.82■□□□□ 0.6
HDAC7-220ENST00000471235 ENDOVQ8N8Q3 282 aaKnown RBP18.82■□□□□ 0.6
HDAC7-220ENST00000471235 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.82■□□□□ 0.6
HDAC7-220ENST00000471235 TM4SF19Q96DZ7 209 aa18.82■□□□□ 0.6
HDAC7-220ENST00000471235 MACROD1Q9BQ69 325 aa18.82■□□□□ 0.6
HDAC7-220ENST00000471235 MRPL57Q9BQC6 102 aaKnown RBP18.82■□□□□ 0.6
HDAC7-220ENST00000471235 CAPS2Q9BXY5 557 aa18.82■□□□□ 0.6
HDAC7-220ENST00000471235 GPR87Q9BY21 358 aa18.82■□□□□ 0.6
HDAC7-220ENST00000471235 SLC22A11Q9NSA0 550 aa18.82■□□□□ 0.6
HDAC7-220ENST00000471235 GEMIN8Q9NWZ8 242 aaKnown RBP18.82■□□□□ 0.6
HDAC7-220ENST00000471235 MRPS2Q9Y399 296 aaKnown RBP18.82■□□□□ 0.6
HDAC7-220ENST00000471235 PCSK5Q92824 1860 aa18.82■□□□□ 0.6
HDAC7-220ENST00000471235 SBK3P0C264 359 aa18.81■□□□□ 0.6
HDAC7-220ENST00000471235 KRT15P19012 456 aa18.81■□□□□ 0.6
HDAC7-220ENST00000471235 PTPN4P29074 926 aa18.81■□□□□ 0.6
HDAC7-220ENST00000471235 RPS15P62841 145 aaKnown RBP18.81■□□□□ 0.6
HDAC7-220ENST00000471235 SLBPQ14493 270 aaKnown RBP eCLIP18.81■□□□□ 0.6
HDAC7-220ENST00000471235 GARNL3Q5VVW2 1013 aa18.81■□□□□ 0.6
HDAC7-220ENST00000471235 COX15Q7KZN9 410 aa18.81■□□□□ 0.6
HDAC7-220ENST00000471235 GPR155Q7Z3F1 870 aa18.81■□□□□ 0.6
HDAC7-220ENST00000471235 RIBC1Q8N443 379 aaPredicted RBP18.81■□□□□ 0.6
HDAC7-220ENST00000471235 TBC1D19Q8N5T2 526 aa18.81■□□□□ 0.6
HDAC7-220ENST00000471235 ZSCAN1Q8NBB4 408 aa18.81■□□□□ 0.6
HDAC7-220ENST00000471235 CAMKVQ8NCB2 501 aa18.81■□□□□ 0.6
HDAC7-220ENST00000471235 NLNQ9BYT8 704 aa18.81■□□□□ 0.6
HDAC7-220ENST00000471235 EHD1Q9H4M9 534 aa18.81■□□□□ 0.6
HDAC7-220ENST00000471235 RRAGDQ9NQL2 400 aaPredicted RBP18.81■□□□□ 0.6
HDAC7-220ENST00000471235 TMEM216Q9P0N5 145 aa18.81■□□□□ 0.6
HDAC7-220ENST00000471235 IFT80Q9P2H3 777 aaPredicted RBP18.81■□□□□ 0.6
HDAC7-220ENST00000471235 TMCO1Q9UM00 188 aa18.81■□□□□ 0.6
HDAC7-220ENST00000471235 LHX6Q9UPM6 363 aa18.81■□□□□ 0.6
HDAC7-220ENST00000471235 PLAAQ9Y263 795 aa18.81■□□□□ 0.6
HDAC7-220ENST00000471235 TLDC2A0PJX2 215 aa18.8■□□□□ 0.6
HDAC7-220ENST00000471235 NKX2-8O15522 239 aa18.8■□□□□ 0.6
HDAC7-220ENST00000471235 CNOT3O75175 753 aaKnown RBP18.8■□□□□ 0.6
HDAC7-220ENST00000471235 SMIM24O75264 130 aa18.8■□□□□ 0.6
HDAC7-220ENST00000471235 CREG1O75629 220 aa18.8■□□□□ 0.6
HDAC7-220ENST00000471235 SIX3O95343 332 aaPredicted RBP18.8■□□□□ 0.6
HDAC7-220ENST00000471235 ONECUT2O95948 504 aa18.8■□□□□ 0.6
HDAC7-220ENST00000471235 AHRP35869 848 aa18.8■□□□□ 0.6
HDAC7-220ENST00000471235 OR1D4P47884 311 aa18.8■□□□□ 0.6
HDAC7-220ENST00000471235 CYP4F2P78329 520 aa18.8■□□□□ 0.6
HDAC7-220ENST00000471235 IFFO1Q0D2I5 559 aa18.8■□□□□ 0.6
HDAC7-220ENST00000471235 CDC20Q12834 499 aa18.8■□□□□ 0.6
HDAC7-220ENST00000471235 PCBP2Q15366 365 aaKnown RBP eCLIP18.8■□□□□ 0.6
HDAC7-220ENST00000471235 C16orf46Q6P387 395 aa18.8■□□□□ 0.6
HDAC7-220ENST00000471235 SH2D5Q6ZV89 423 aa18.8■□□□□ 0.6
HDAC7-220ENST00000471235 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.8■□□□□ 0.6
HDAC7-220ENST00000471235 TMEM151AQ8N4L1 468 aa18.8■□□□□ 0.6
HDAC7-220ENST00000471235 ANKRD53Q8N9V6 530 aa18.8■□□□□ 0.6
HDAC7-220ENST00000471235 ZCCHC10Q8TBK6 192 aa18.8■□□□□ 0.6
HDAC7-220ENST00000471235 SLC13A3Q8WWT9 602 aa18.8■□□□□ 0.6
HDAC7-220ENST00000471235 FKBP10Q96AY3 582 aa18.8■□□□□ 0.6
HDAC7-220ENST00000471235 WDR34Q96EX3 536 aa18.8■□□□□ 0.6
HDAC7-220ENST00000471235 C17orf62Q9BQA9 187 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms