RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, human

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSB-209	ENST00000470621		F8VWA3	439 aa		4.54	□□□□□ -1.68
SSB-209	ENST00000470621		G3V2L1	256 aa		4.54	□□□□□ -1.68
SSB-209	ENST00000470621	ECE2	O60344	883 aa		4.54	□□□□□ -1.68
SSB-209	ENST00000470621	APOA4	P06727	396 aa		4.54	□□□□□ -1.68
SSB-209	ENST00000470621	LBP	P18428	481 aa		4.54	□□□□□ -1.68
SSB-209	ENST00000470621	TSFM	P43897	325 aa	Known RBP	4.54	□□□□□ -1.68
SSB-209	ENST00000470621	CACNG1	Q06432	222 aa		4.54	□□□□□ -1.68
SSB-209	ENST00000470621	SRSF9	Q13242	221 aa	Known RBP eCLIP	4.54	□□□□□ -1.68
SSB-209	ENST00000470621	FASTKD3	Q14CZ7	662 aa	Known RBP	4.54	□□□□□ -1.68
SSB-209	ENST00000470621	PAQR6	Q6TCH4	344 aa		4.54	□□□□□ -1.68
SSB-209	ENST00000470621	MOXD1	Q6UVY6	613 aa		4.54	□□□□□ -1.68
SSB-209	ENST00000470621	METTL7B	Q6UX53	244 aa		4.54	□□□□□ -1.68
SSB-209	ENST00000470621	FRRS1	Q6ZNA5	592 aa		4.54	□□□□□ -1.68
SSB-209	ENST00000470621	ADCK2	Q7Z695	626 aa		4.54	□□□□□ -1.68
SSB-209	ENST00000470621	SLFN11	Q7Z7L1	901 aa		4.54	□□□□□ -1.68
SSB-209	ENST00000470621	NUP37	Q8NFH4	326 aa		4.54	□□□□□ -1.68
SSB-209	ENST00000470621	OR4C15	Q8NGM1	316 aa		4.54	□□□□□ -1.68
SSB-209	ENST00000470621	ATP8B4	Q8TF62	1192 aa		4.54	□□□□□ -1.68
SSB-209	ENST00000470621	GTF3A	Q92664	365 aa	Known RBP	4.54	□□□□□ -1.68
SSB-209	ENST00000470621	P2RX5	Q93086	422 aa		4.54	□□□□□ -1.68
SSB-209	ENST00000470621	RBM41	Q96IZ5	413 aa	Known RBP	4.54	□□□□□ -1.68
SSB-209	ENST00000470621	LRRC61	Q9BV99	259 aa		4.54	□□□□□ -1.68
SSB-209	ENST00000470621	DNAI2	Q9GZS0	605 aa		4.54	□□□□□ -1.68
SSB-209	ENST00000470621	NRBP1	Q9UHY1	535 aa		4.54	□□□□□ -1.68
SSB-209	ENST00000470621	ANXA2P2	A6NMY6	339 aa		4.53	□□□□□ -1.68
SSB-209	ENST00000470621		H3BMM5	538 aa		4.53	□□□□□ -1.68
SSB-209	ENST00000470621	RTCA	O00442	366 aa	Known RBP	4.53	□□□□□ -1.68
SSB-209	ENST00000470621	MYL6B	P14649	208 aa		4.53	□□□□□ -1.68
SSB-209	ENST00000470621	PDGFRA	P16234	1089 aa		4.53	□□□□□ -1.68
SSB-209	ENST00000470621	RBMS1	P29558	406 aa	Known RBP	4.53	□□□□□ -1.68
SSB-209	ENST00000470621	SFTPD	P35247	375 aa		4.53	□□□□□ -1.68
SSB-209	ENST00000470621	CETN2	P41208	172 aa		4.53	□□□□□ -1.68
SSB-209	ENST00000470621	PRKCI	P41743	596 aa		4.53	□□□□□ -1.68
SSB-209	ENST00000470621	MFAP3	P55082	362 aa		4.53	□□□□□ -1.68
SSB-209	ENST00000470621	PTEN	P60484	403 aa		4.53	□□□□□ -1.68
SSB-209	ENST00000470621	LMO4	P61968	165 aa		4.53	□□□□□ -1.68
SSB-209	ENST00000470621	SGCG	Q13326	291 aa		4.53	□□□□□ -1.68
SSB-209	ENST00000470621	FAM189A2	Q15884	450 aa		4.53	□□□□□ -1.68
SSB-209	ENST00000470621	GLIPR1L2	Q4G1C9	344 aa		4.53	□□□□□ -1.68
SSB-209	ENST00000470621	LRRC73	Q5JTD7	316 aa		4.53	□□□□□ -1.68
SSB-209	ENST00000470621	LCE3C	Q5T5A8	94 aa		4.53	□□□□□ -1.68
SSB-209	ENST00000470621	FAM166A	Q6J272	317 aa		4.53	□□□□□ -1.68
SSB-209	ENST00000470621	ZNF343	Q6P1L6	599 aa		4.53	□□□□□ -1.68
SSB-209	ENST00000470621	TTC27	Q6P3X3	843 aa		4.53	□□□□□ -1.68
SSB-209	ENST00000470621	TRAT1	Q6PIZ9	186 aa		4.53	□□□□□ -1.68
SSB-209	ENST00000470621	GPRIN3	Q6ZVF9	776 aa		4.53	□□□□□ -1.68
SSB-209	ENST00000470621	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	4.53	□□□□□ -1.68
SSB-209	ENST00000470621	AMIGO1	Q86WK6	493 aa		4.53	□□□□□ -1.68
SSB-209	ENST00000470621	TCEANC	Q8N8B7	351 aa		4.53	□□□□□ -1.68
SSB-209	ENST00000470621	GBP7	Q8N8V2	638 aa	Predicted RBP	4.53	□□□□□ -1.68
SSB-209	ENST00000470621	CCDC63	Q8NA47	563 aa		4.53	□□□□□ -1.68
SSB-209	ENST00000470621	OCC1	Q8TAD7	63 aa		4.53	□□□□□ -1.68
SSB-209	ENST00000470621	ST6GALNAC6	Q969X2	333 aa		4.53	□□□□□ -1.68
SSB-209	ENST00000470621	SIPA1	Q96FS4	1042 aa		4.53	□□□□□ -1.68
SSB-209	ENST00000470621	PGM2	Q96G03	612 aa		4.53	□□□□□ -1.68
SSB-209	ENST00000470621	GDAP1L1	Q96MZ0	367 aa		4.53	□□□□□ -1.68
SSB-209	ENST00000470621	MGME1	Q9BQP7	344 aa		4.53	□□□□□ -1.68
SSB-209	ENST00000470621	OVOL2	Q9BRP0	275 aa		4.53	□□□□□ -1.68
SSB-209	ENST00000470621	HOXD1	Q9GZZ0	328 aa		4.53	□□□□□ -1.68
SSB-209	ENST00000470621	TBC1D13	Q9NVG8	400 aa		4.53	□□□□□ -1.68
SSB-209	ENST00000470621	PKD2L2	Q9NZM6	624 aa		4.53	□□□□□ -1.68
SSB-209	ENST00000470621	HACD3	Q9P035	362 aa		4.53	□□□□□ -1.68
SSB-209	ENST00000470621	ANAPC5	Q9UJX4	755 aa		4.53	□□□□□ -1.68
SSB-209	ENST00000470621	ELF5	Q9UKW6	265 aa	Predicted RBP	4.53	□□□□□ -1.68
SSB-209	ENST00000470621	NPIPB9	F8W1W9	429 aa		4.52	□□□□□ -1.69
SSB-209	ENST00000470621		H7C0S8	307 aa		4.52	□□□□□ -1.69
SSB-209	ENST00000470621	EPOR	P19235	508 aa		4.52	□□□□□ -1.69
SSB-209	ENST00000470621	LY6D	Q14210	128 aa		4.52	□□□□□ -1.69
SSB-209	ENST00000470621	RBBP7	Q16576	425 aa		4.52	□□□□□ -1.69
SSB-209	ENST00000470621	BTNL8	Q6UX41	500 aa		4.52	□□□□□ -1.69
SSB-209	ENST00000470621	C11orf57	Q6ZUT1	292 aa	Predicted RBP	4.52	□□□□□ -1.69
SSB-209	ENST00000470621	MIPOL1	Q8TD10	442 aa		4.52	□□□□□ -1.69
SSB-209	ENST00000470621	HEXDC	Q8WVB3	486 aa		4.52	□□□□□ -1.69
SSB-209	ENST00000470621	ATXN7L3B	Q96GX2	97 aa		4.52	□□□□□ -1.69
SSB-209	ENST00000470621	AP1M1	Q9BXS5	423 aa		4.52	□□□□□ -1.69
SSB-209	ENST00000470621	UBXN6	Q9BZV1	441 aa		4.52	□□□□□ -1.69
SSB-209	ENST00000470621	RNF121	Q9H920	327 aa		4.52	□□□□□ -1.69
SSB-209	ENST00000470621	PILRB	Q9UKJ0	227 aa		4.52	□□□□□ -1.69
SSB-209	ENST00000470621	MMP24	Q9Y5R2	645 aa		4.52	□□□□□ -1.69
SSB-209	ENST00000470621	TP53BP1	Q12888	1972 aa	Predicted RBP	4.51	□□□□□ -1.69
SSB-209	ENST00000470621	IGHV3OR16-10	A0A075B7F0	116 aa		4.51	□□□□□ -1.69
SSB-209	ENST00000470621	PRSS46	E5RG02	174 aa		4.51	□□□□□ -1.69
SSB-209	ENST00000470621	TLX2	O43763	284 aa	Predicted RBP	4.51	□□□□□ -1.69
SSB-209	ENST00000470621	CYTIP	O60759	359 aa		4.51	□□□□□ -1.69
SSB-209	ENST00000470621	SAP30	O75446	220 aa		4.51	□□□□□ -1.69
SSB-209	ENST00000470621	GBA	P04062	536 aa		4.51	□□□□□ -1.69
SSB-209	ENST00000470621	SELE	P16581	610 aa		4.51	□□□□□ -1.69
SSB-209	ENST00000470621	ADRA2C	P18825	462 aa		4.51	□□□□□ -1.69
SSB-209	ENST00000470621	PSMA3	P25788	255 aa		4.51	□□□□□ -1.69
SSB-209	ENST00000470621	PDHA2	P29803	388 aa		4.51	□□□□□ -1.69
SSB-209	ENST00000470621	TMEM50B	P56557	158 aa		4.51	□□□□□ -1.69
SSB-209	ENST00000470621	DSCR10	P59022	87 aa		4.51	□□□□□ -1.69
SSB-209	ENST00000470621	TNK1	Q13470	666 aa		4.51	□□□□□ -1.69
SSB-209	ENST00000470621	FAM174B	Q3ZCQ3	159 aa		4.51	□□□□□ -1.69
SSB-209	ENST00000470621	NOTUM	Q6P988	496 aa		4.51	□□□□□ -1.69
SSB-209	ENST00000470621	TMEM182	Q6ZP80	229 aa	Predicted RBP	4.51	□□□□□ -1.69
SSB-209	ENST00000470621	C5orf24	Q7Z6I8	188 aa		4.51	□□□□□ -1.69
SSB-209	ENST00000470621	CCDC60	Q8IWA6	550 aa	Predicted RBP	4.51	□□□□□ -1.69
SSB-209	ENST00000470621	NME8	Q8N427	588 aa		4.51	□□□□□ -1.69
SSB-209	ENST00000470621	OR5T2	Q8NGG2	359 aa		4.51	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms