RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 IMMP1LQ96LU5 166 aa16.56■□□□□ 0.24
COL7A1-208ENST00000470076 CCDC138Q96M89 665 aa16.56■□□□□ 0.24
COL7A1-208ENST00000470076 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.56■□□□□ 0.24
COL7A1-208ENST00000470076 TRMT6Q9UJA5 497 aaKnown RBP16.56■□□□□ 0.24
COL7A1-208ENST00000470076 CROCCQ5TZA2 2017 aa16.56■□□□□ 0.24
COL7A1-208ENST00000470076 C8GP07360 202 aa16.55■□□□□ 0.24
COL7A1-208ENST00000470076 CELA2AP08217 269 aa16.55■□□□□ 0.24
COL7A1-208ENST00000470076 ITGAMP11215 1152 aa16.55■□□□□ 0.24
COL7A1-208ENST00000470076 SP140Q13342 867 aa16.55■□□□□ 0.24
COL7A1-208ENST00000470076 ABHD17BQ5VST6 288 aa16.55■□□□□ 0.24
COL7A1-208ENST00000470076 SPNS2Q8IVW8 549 aa16.55■□□□□ 0.24
COL7A1-208ENST00000470076 PALM2Q8IXS6 379 aa16.55■□□□□ 0.24
COL7A1-208ENST00000470076 PPIL6Q8IXY8 311 aa16.55■□□□□ 0.24
COL7A1-208ENST00000470076 SLC34A3Q8N130 599 aa16.55■□□□□ 0.24
COL7A1-208ENST00000470076 CAMKVQ8NCB2 501 aa16.55■□□□□ 0.24
COL7A1-208ENST00000470076 NR4A3Q92570 626 aa16.55■□□□□ 0.24
COL7A1-208ENST00000470076 TAAR6Q96RI8 345 aa16.55■□□□□ 0.24
COL7A1-208ENST00000470076 FAM129AQ9BZQ8 928 aa16.55■□□□□ 0.24
COL7A1-208ENST00000470076 VN1R1Q9GZP7 353 aa16.55■□□□□ 0.24
COL7A1-208ENST00000470076 IARS2Q9NSE4 1012 aaKnown RBP16.55■□□□□ 0.24
COL7A1-208ENST00000470076 C19orf25Q9UFG5 118 aaPredicted RBP16.55■□□□□ 0.24
COL7A1-208ENST00000470076 TEKT2Q9UIF3 430 aa16.55■□□□□ 0.24
COL7A1-208ENST00000470076 SCN3AQ9NY46 2000 aa16.55■□□□□ 0.24
COL7A1-208ENST00000470076 ABCA12Q86UK0 2595 aa16.54■□□□□ 0.24
COL7A1-208ENST00000470076 WDPCPO95876 746 aa16.54■□□□□ 0.24
COL7A1-208ENST00000470076 MYBL2P10244 700 aa16.54■□□□□ 0.24
COL7A1-208ENST00000470076 PGAM1P18669 254 aa16.54■□□□□ 0.24
COL7A1-208ENST00000470076 CCND1P24385 295 aa16.54■□□□□ 0.24
COL7A1-208ENST00000470076 FNTAP49354 379 aa16.54■□□□□ 0.24
COL7A1-208ENST00000470076 TDGF1P3P51864 188 aa16.54■□□□□ 0.24
COL7A1-208ENST00000470076 EFNA3P52797 238 aa16.54■□□□□ 0.24
COL7A1-208ENST00000470076 CSNK1G2P78368 415 aa16.54■□□□□ 0.24
COL7A1-208ENST00000470076 ZRSR2Q15696 482 aaKnown RBP16.54■□□□□ 0.24
COL7A1-208ENST00000470076 TMEM214Q6NUQ4 689 aaKnown RBP16.54■□□□□ 0.24
COL7A1-208ENST00000470076 HIBCHQ6NVY1 386 aaPredicted RBP16.54■□□□□ 0.24
COL7A1-208ENST00000470076 AGTRAPQ6RW13 159 aa16.54■□□□□ 0.24
COL7A1-208ENST00000470076 C17orf64Q86WR6 236 aa16.54■□□□□ 0.24
COL7A1-208ENST00000470076 C2CD4AQ8NCU7 369 aaPredicted RBP16.54■□□□□ 0.24
COL7A1-208ENST00000470076 SUN3Q8TAQ9 357 aa16.54■□□□□ 0.24
COL7A1-208ENST00000470076 EEF1AKMT1Q8WVE0 214 aa16.54■□□□□ 0.24
COL7A1-208ENST00000470076 CYTH2Q99418 400 aa16.54■□□□□ 0.24
COL7A1-208ENST00000470076 PARVBQ9HBI1 364 aa16.54■□□□□ 0.24
COL7A1-208ENST00000470076 TAS2R13Q9NYV9 303 aa16.54■□□□□ 0.24
COL7A1-208ENST00000470076 ADAMTS6Q9UKP5 1117 aa16.54■□□□□ 0.24
COL7A1-208ENST00000470076 PDE10AQ9Y233 779 aa16.54■□□□□ 0.24
COL7A1-208ENST00000470076 MYO7BQ6PIF6 2116 aa16.54■□□□□ 0.24
COL7A1-208ENST00000470076 GOLGA6L10A0A0M3HER8 536 aa16.53■□□□□ 0.24
COL7A1-208ENST00000470076 OR5H15A6NDH6 313 aa16.53■□□□□ 0.24
COL7A1-208ENST00000470076 SLC16A5O15375 505 aa16.53■□□□□ 0.24
COL7A1-208ENST00000470076 TTC4O95801 387 aa16.53■□□□□ 0.24
COL7A1-208ENST00000470076 CRYABP02511 175 aaKnown RBP16.53■□□□□ 0.24
COL7A1-208ENST00000470076 STATHP02808 62 aa16.53■□□□□ 0.24
COL7A1-208ENST00000470076 GRK3P35626 688 aa16.53■□□□□ 0.24
COL7A1-208ENST00000470076 BCL6P41182 706 aa16.53■□□□□ 0.24
COL7A1-208ENST00000470076 XCR1P46094 333 aa16.53■□□□□ 0.24
COL7A1-208ENST00000470076 SNRPNP63162 240 aaKnown RBP16.53■□□□□ 0.24
COL7A1-208ENST00000470076 CRYMQ14894 314 aa16.53■□□□□ 0.24
COL7A1-208ENST00000470076 MINDY4Q4G0A6 757 aa16.53■□□□□ 0.24
COL7A1-208ENST00000470076 MFSD4BQ5TF39 518 aa16.53■□□□□ 0.24
COL7A1-208ENST00000470076 PRSS41Q7RTY9 318 aa16.53■□□□□ 0.24
COL7A1-208ENST00000470076 CPEB2Q7Z5Q1 589 aaKnown RBP16.53■□□□□ 0.24
COL7A1-208ENST00000470076 PCGF5Q86SE9 256 aa16.53■□□□□ 0.24
COL7A1-208ENST00000470076 MYO1HQ8N1T3 1032 aa16.53■□□□□ 0.24
COL7A1-208ENST00000470076 OR51Q1Q8NH59 317 aa16.53■□□□□ 0.24
COL7A1-208ENST00000470076 DNAJB8Q8NHS0 232 aa16.53■□□□□ 0.24
COL7A1-208ENST00000470076 ACTRT1Q8TDG2 376 aa16.53■□□□□ 0.24
COL7A1-208ENST00000470076 TM4SF19Q96DZ7 209 aa16.53■□□□□ 0.24
COL7A1-208ENST00000470076 NDNQ99608 321 aa16.53■□□□□ 0.24
COL7A1-208ENST00000470076 ANKHQ9HCJ1 492 aa16.53■□□□□ 0.24
COL7A1-208ENST00000470076 STMN3Q9NZ72 180 aa16.53■□□□□ 0.24
COL7A1-208ENST00000470076 ZG16O60844 167 aa16.52■□□□□ 0.24
COL7A1-208ENST00000470076 SEC24DO94855 1032 aaPredicted RBP16.52■□□□□ 0.24
COL7A1-208ENST00000470076 RASAL1O95294 804 aa16.52■□□□□ 0.24
COL7A1-208ENST00000470076 F10P00742 488 aa16.52■□□□□ 0.24
COL7A1-208ENST00000470076 IL1RNP18510 177 aa16.52■□□□□ 0.24
COL7A1-208ENST00000470076 AGTR2P50052 363 aa16.52■□□□□ 0.24
COL7A1-208ENST00000470076 TIAL1Q01085 375 aaKnown RBP eCLIP16.52■□□□□ 0.24
COL7A1-208ENST00000470076 ZNF33BQ06732 778 aa16.52■□□□□ 0.24
COL7A1-208ENST00000470076 NAE1Q13564 534 aa16.52■□□□□ 0.24
COL7A1-208ENST00000470076 PPP1R7Q15435 360 aa16.52■□□□□ 0.24
COL7A1-208ENST00000470076 RNASEH2BQ5TBB1 312 aaKnown RBP16.52■□□□□ 0.24
COL7A1-208ENST00000470076 PLAG1Q6DJT9 500 aa16.52■□□□□ 0.24
COL7A1-208ENST00000470076 LCTLQ6UWM7 567 aa16.52■□□□□ 0.24
COL7A1-208ENST00000470076 LANCL3Q6ZV70 420 aa16.52■□□□□ 0.24
COL7A1-208ENST00000470076 ASPGQ86U10 573 aa16.52■□□□□ 0.24
COL7A1-208ENST00000470076 FJX1Q86VR8 437 aa16.52■□□□□ 0.24
COL7A1-208ENST00000470076 RELTQ969Z4 430 aa16.52■□□□□ 0.24
COL7A1-208ENST00000470076 MACROD1Q9BQ69 325 aa16.52■□□□□ 0.24
COL7A1-208ENST00000470076 NAT9Q9BTE0 207 aa16.52■□□□□ 0.24
COL7A1-208ENST00000470076 SGPP1Q9BX95 441 aa16.52■□□□□ 0.24
COL7A1-208ENST00000470076 ATG10Q9H0Y0 220 aa16.52■□□□□ 0.24
COL7A1-208ENST00000470076 HCN3Q9P1Z3 774 aa16.52■□□□□ 0.24
COL7A1-208ENST00000470076 ABI3Q9P2A4 366 aa16.52■□□□□ 0.24
COL7A1-208ENST00000470076 SGK494L7N484 410 aa16.51■□□□□ 0.23
COL7A1-208ENST00000470076 PRAMEF2O60811 474 aa16.51■□□□□ 0.23
COL7A1-208ENST00000470076 HIST1H2AGP0C0S8 130 aaPredicted RBP16.51■□□□□ 0.23
COL7A1-208ENST00000470076 SLC35G6P0C7Q6 338 aa16.51■□□□□ 0.23
COL7A1-208ENST00000470076 HIST1H2ADP20671 130 aa16.51■□□□□ 0.23
COL7A1-208ENST00000470076 KCNK10P57789 538 aa16.51■□□□□ 0.23
COL7A1-208ENST00000470076 BTBD16Q32M84 506 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms