RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 GCM2O75603 506 aaPredicted RBP13.18□□□□□ -0.3
BRCA1-209ENST00000470026 NADKO95544 446 aaPredicted RBP13.18□□□□□ -0.3
BRCA1-209ENST00000470026 HLA-FP30511 346 aa13.18□□□□□ -0.3
BRCA1-209ENST00000470026 HNF4AP41235 474 aa13.18□□□□□ -0.3
BRCA1-209ENST00000470026 ASMTP46597 345 aa13.18□□□□□ -0.3
BRCA1-209ENST00000470026 VBP1P61758 197 aa13.18□□□□□ -0.3
BRCA1-209ENST00000470026 CYP4F8P98187 520 aa13.18□□□□□ -0.3
BRCA1-209ENST00000470026 CREMQ03060 361 aa13.18□□□□□ -0.3
BRCA1-209ENST00000470026 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.18□□□□□ -0.3
BRCA1-209ENST00000470026 PDE12Q6L8Q7 609 aaKnown RBP13.18□□□□□ -0.3
BRCA1-209ENST00000470026 DPY19L3Q6ZPD9 716 aa13.18□□□□□ -0.3
BRCA1-209ENST00000470026 THOC6Q86W42 341 aaKnown RBP13.18□□□□□ -0.3
BRCA1-209ENST00000470026 ATG16L2Q8NAA4 619 aa13.18□□□□□ -0.3
BRCA1-209ENST00000470026 SKA2Q8WVK7 121 aaPredicted RBP13.18□□□□□ -0.3
BRCA1-209ENST00000470026 ASZ1Q8WWH4 475 aa13.18□□□□□ -0.3
BRCA1-209ENST00000470026 FCGR1BQ92637 280 aa13.18□□□□□ -0.3
BRCA1-209ENST00000470026 GLMNQ92990 594 aa13.18□□□□□ -0.3
BRCA1-209ENST00000470026 TAMM41Q96BW9 452 aa13.18□□□□□ -0.3
BRCA1-209ENST00000470026 EMILIN2Q9BXX0 1053 aa13.18□□□□□ -0.3
BRCA1-209ENST00000470026 HMX1Q9NP08 348 aaPredicted RBP13.18□□□□□ -0.3
BRCA1-209ENST00000470026 FKBP14Q9NWM8 211 aa13.18□□□□□ -0.3
BRCA1-209ENST00000470026 NFKBIL1Q9UBC1 381 aaPredicted RBP13.18□□□□□ -0.3
BRCA1-209ENST00000470026 DAPK2Q9UIK4 370 aa13.18□□□□□ -0.3
BRCA1-209ENST00000470026 SH3BP1Q9Y3L3 701 aa13.18□□□□□ -0.3
BRCA1-209ENST00000470026 NUP214P35658 2090 aaPredicted RBP13.18□□□□□ -0.3
BRCA1-209ENST00000470026 GABRR3A8MPY1 467 aa13.18□□□□□ -0.3
BRCA1-209ENST00000470026 ARHGEF33A8MVX0 844 aa13.18□□□□□ -0.3
BRCA1-209ENST00000470026 TOR1BO14657 336 aa13.18□□□□□ -0.3
BRCA1-209ENST00000470026 CPSF4O95639 269 aaKnown RBP13.18□□□□□ -0.3
BRCA1-209ENST00000470026 FADS2O95864 444 aaKnown RBP13.18□□□□□ -0.3
BRCA1-209ENST00000470026 NTRK1P04629 796 aa13.18□□□□□ -0.3
BRCA1-209ENST00000470026 ZNF30P17039 623 aa13.18□□□□□ -0.3
BRCA1-209ENST00000470026 PSMB9P28065 219 aa13.18□□□□□ -0.3
BRCA1-209ENST00000470026 GABRR2P28476 465 aa13.18□□□□□ -0.3
BRCA1-209ENST00000470026 UGT2B10P36537 528 aa13.18□□□□□ -0.3
BRCA1-209ENST00000470026 ACSM2AQ08AH3 577 aa13.18□□□□□ -0.3
BRCA1-209ENST00000470026 DOC2AQ14183 400 aa13.18□□□□□ -0.3
BRCA1-209ENST00000470026 RGNQ15493 299 aa13.18□□□□□ -0.3
BRCA1-209ENST00000470026 XKR6Q5GH73 641 aa13.18□□□□□ -0.3
BRCA1-209ENST00000470026 ACSM2BQ68CK6 577 aa13.18□□□□□ -0.3
BRCA1-209ENST00000470026 TMC8Q8IU68 726 aa13.18□□□□□ -0.3
BRCA1-209ENST00000470026 CHTF18Q8WVB6 975 aa13.18□□□□□ -0.3
BRCA1-209ENST00000470026 CLP1Q92989 425 aaKnown RBP13.18□□□□□ -0.3
BRCA1-209ENST00000470026 UBE2FQ969M7 185 aa13.18□□□□□ -0.3
BRCA1-209ENST00000470026 SH3KBP1Q96B97 665 aa13.18□□□□□ -0.3
BRCA1-209ENST00000470026 LGALS12Q96DT0 336 aa13.18□□□□□ -0.3
BRCA1-209ENST00000470026 MYOCQ99972 504 aa13.18□□□□□ -0.3
BRCA1-209ENST00000470026 TRNAU1APQ9NX07 287 aaKnown RBP13.18□□□□□ -0.3
BRCA1-209ENST00000470026 KIF17Q9P2E2 1029 aa13.18□□□□□ -0.3
BRCA1-209ENST00000470026 FZD4Q9ULV1 537 aa13.18□□□□□ -0.3
BRCA1-209ENST00000470026 PCDHGB3Q9Y5G1 929 aa13.18□□□□□ -0.3
BRCA1-209ENST00000470026 BRCA2P51587 3418 aa13.17□□□□□ -0.3
BRCA1-209ENST00000470026 E7EQ34 232 aa13.17□□□□□ -0.3
BRCA1-209ENST00000470026 ATP6V1G1O75348 118 aa13.17□□□□□ -0.3
BRCA1-209ENST00000470026 ALOX5P09917 674 aa13.17□□□□□ -0.3
BRCA1-209ENST00000470026 NUDT7P0C024 238 aa13.17□□□□□ -0.3
BRCA1-209ENST00000470026 CTSAP10619 480 aa13.17□□□□□ -0.3
BRCA1-209ENST00000470026 IDSP22304 550 aa13.17□□□□□ -0.3
BRCA1-209ENST00000470026 MAGEA8P43361 318 aa13.17□□□□□ -0.3
BRCA1-209ENST00000470026 RXRGP48443 463 aa13.17□□□□□ -0.3
BRCA1-209ENST00000470026 NCS1P62166 190 aa13.17□□□□□ -0.3
BRCA1-209ENST00000470026 IL1RL1Q01638 556 aa13.17□□□□□ -0.3
BRCA1-209ENST00000470026 TEKQ02763 1124 aa13.17□□□□□ -0.3
BRCA1-209ENST00000470026 LRRC74AQ0VAA2 488 aa13.17□□□□□ -0.3
BRCA1-209ENST00000470026 INAQ16352 499 aa13.17□□□□□ -0.3
BRCA1-209ENST00000470026 ANXA8L1Q5VT79 327 aa13.17□□□□□ -0.3
BRCA1-209ENST00000470026 RAET1EQ8TD07 263 aa13.17□□□□□ -0.3
BRCA1-209ENST00000470026 ATL1Q8WXF7 558 aa13.17□□□□□ -0.3
BRCA1-209ENST00000470026 ELMO1Q92556 727 aa13.17□□□□□ -0.3
BRCA1-209ENST00000470026 MRPS31Q92665 395 aaKnown RBP13.17□□□□□ -0.3
BRCA1-209ENST00000470026 DNASE1L2Q92874 299 aa13.17□□□□□ -0.3
BRCA1-209ENST00000470026 SLC38A4Q969I6 547 aa13.17□□□□□ -0.3
BRCA1-209ENST00000470026 OR4K3Q96R72 315 aa13.17□□□□□ -0.3
BRCA1-209ENST00000470026 DOHHQ9BU89 302 aa13.17□□□□□ -0.3
BRCA1-209ENST00000470026 BBS2Q9BXC9 721 aa13.17□□□□□ -0.3
BRCA1-209ENST00000470026 EPS8L2Q9H6S3 715 aa13.17□□□□□ -0.3
BRCA1-209ENST00000470026 PSORS1C1Q9UIG5 152 aa13.17□□□□□ -0.3
BRCA1-209ENST00000470026 UPK3BL1B0FP48 263 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 UPK3BL2E5RIL1 263 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 RNASET2O00584 256 aaKnown RBP13.16□□□□□ -0.3
BRCA1-209ENST00000470026 SUV39H1O43463 412 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 MYO1DO94832 1006 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 ETHE1O95571 254 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 CKMP06732 381 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 MVDP53602 400 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 GAB1Q13480 694 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 TBCEQ15813 527 aaPredicted RBP13.16□□□□□ -0.3
BRCA1-209ENST00000470026 CCDC81Q6ZN84 652 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 ADCK1Q86TW2 530 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 NPAS3Q8IXF0 933 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 CMTM8Q8IZV2 173 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 OR56A3Q8NH54 315 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 GOT1L1Q8NHS2 421 aaPredicted RBP13.16□□□□□ -0.3
BRCA1-209ENST00000470026 CXorf40BQ96DE9 158 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 TMEM169Q96HH4 297 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 ZNF558Q96NG5 402 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 ITPAQ9BY32 194 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 ZDHHC6Q9H6R6 413 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 PCDH12Q9NPG4 1184 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 INIPQ9NRY2 104 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms