RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 EXOSC4Q9NPD3 245 aaKnown RBP8.75□□□□□ -1.01
SMARCE1-207ENST00000469334 GPR83Q9NYM4 423 aa8.75□□□□□ -1.01
SMARCE1-207ENST00000469334 UBP1Q9NZI7 540 aa8.75□□□□□ -1.01
SMARCE1-207ENST00000469334 ABCG2Q9UNQ0 655 aa8.75□□□□□ -1.01
SMARCE1-207ENST00000469334 NCKAP1Q9Y2A7 1128 aa8.75□□□□□ -1.01
SMARCE1-207ENST00000469334 KCNMB2Q9Y691 235 aa8.75□□□□□ -1.01
SMARCE1-207ENST00000469334 ZSWIM8A7E2V4 1837 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 ASB14A6NK59 587 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 E9PAM4 449 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 BTN3A1O00481 513 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 PER2O15055 1255 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 MPZL2O60487 215 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 PRAMEF1O95521 474 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 JCHAINP01591 159 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 IL6P05231 212 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 CXCL8P10145 99 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 CKMT1AP12532 417 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 PTPRAP18433 802 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 GABRB1P18505 474 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 STOMP27105 288 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 SDC2P34741 201 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 EPHA4P54764 986 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 MAD2L1Q13257 205 aaPredicted RBP8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 MED22Q15528 200 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 PTCHD3Q3KNS1 767 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 TTLL9Q3SXZ7 439 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 FLYWCH1Q4VC44 716 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 ZNF789Q5FWF6 425 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 MPP7Q5T2T1 576 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 DCAF8Q5TAQ9 597 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 FAM171A1Q5VUB5 890 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 SYPL2Q5VXT5 272 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 CD276Q5ZPR3 534 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 LRFN4Q6PJG9 635 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 GPRIN3Q6ZVF9 776 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 ADGRD2Q7Z7M1 963 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 PGBD5Q8N414 524 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 ATAD1Q8NBU5 361 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 CLHC1Q8NHS4 586 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 STAG3L4Q8TBR4 150 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 SLC22A8Q8TCC7 542 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 CLEC4CQ8WTT0 213 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 SLC9A6Q92581 669 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 ATOH1Q92858 354 aaPredicted RBP8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 UBE2FQ969M7 185 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 KIAA1191Q96A73 305 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 PABPC5Q96DU9 382 aaKnown RBP8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 LINC00052Q96N35 136 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 RBP7Q96R05 134 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 NPY6RQ99463 290 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 RTP3Q9BQQ7 232 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 CPPED1Q9BRF8 314 aaPredicted RBP8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 MED18Q9BUE0 208 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 DPCDQ9BVM2 203 aaPredicted RBP8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 REG4Q9BYZ8 158 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 SLC19A3Q9BZV2 496 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 MFSD1Q9H3U5 465 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 SEMA4BQ9NPR2 832 aaPredicted RBP8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 SLC35C2Q9NQQ7 365 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 SNTG1Q9NSN8 517 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 SDHAF2Q9NX18 166 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 THUMPD1Q9NXG2 353 aaKnown RBP8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 ERAP1Q9NZ08 941 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 TRPM5Q9NZQ8 1165 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 NLKQ9UBE8 527 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 ZNF112Q9UJU3 913 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 NDRG2Q9UN36 371 aaKnown RBP8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 SSR3Q9UNL2 185 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 MRPS7Q9Y2R9 242 aaKnown RBP8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 A0A1W2PQL4 384 aaPredicted RBP8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 PQLC2LA1A4F0 135 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 C7orf66A4D0T2 115 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 LRRC14BA6NHZ5 514 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 SUPT3HB4E1H0 165 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 GABRDO14764 452 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 SNAPINO95295 136 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 ALDH1A1P00352 501 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 LALBAP00709 142 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 G6PDP11413 515 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 LCP1P13796 627 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 FGFBP1Q14512 234 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 OR4D1Q15615 310 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 TARBP2Q15633 366 aaKnown RBP8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 ZNF628Q5EBL2 1059 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 OTUD1Q5VV17 481 aaPredicted RBP8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 UNC93AQ86WB7 457 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 MSRB3Q8IXL7 192 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 DEFB106AQ8N104 65 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 LILRB2Q8N423 598 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 SLAIN1Q8ND83 568 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 IPMKQ8NFU5 416 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 OR52K2Q8NGK3 314 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 UTP15Q8TED0 518 aaKnown RBP8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 FOXJ1Q92949 421 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 PHF21AQ96BD5 680 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 NXPE2Q96DL1 559 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 ZBED6CLQ96FA7 236 aaPredicted RBP8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 ZNF382Q96SR6 550 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 KCNJ15Q99712 375 aa8.74□□□□□ -1.01
SMARCE1-207ENST00000469334 GLOD4Q9HC38 313 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms