RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 LSM12Q3MHD2 195 aaKnown RBP16.78■□□□□ 0.28
RPL39-202ENST00000468844 FAM92BQ6ZTR7 304 aa16.78■□□□□ 0.28
RPL39-202ENST00000468844 LARP4Q71RC2 724 aaKnown RBP eCLIP16.78■□□□□ 0.281e-9■■■■□ 25.2
RPL39-202ENST00000468844 VN1R5Q7Z5H4 357 aa16.78■□□□□ 0.28
RPL39-202ENST00000468844 HOMEZQ8IX15 550 aa16.78■□□□□ 0.28
RPL39-202ENST00000468844 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.78■□□□□ 0.28
RPL39-202ENST00000468844 CCDC197Q8NCU1 140 aa16.78■□□□□ 0.28
RPL39-202ENST00000468844 STON2Q8WXE9 905 aa16.78■□□□□ 0.28
RPL39-202ENST00000468844 UBE2E3Q969T4 207 aa16.78■□□□□ 0.28
RPL39-202ENST00000468844 ZUFSPQ96AP4 578 aa16.78■□□□□ 0.28
RPL39-202ENST00000468844 REPS1Q96D71 796 aa16.78■□□□□ 0.28
RPL39-202ENST00000468844 TGM7Q96PF1 710 aa16.78■□□□□ 0.28
RPL39-202ENST00000468844 MAP3K3Q99759 626 aa16.78■□□□□ 0.28
RPL39-202ENST00000468844 CCDC3Q9BQI4 270 aa16.78■□□□□ 0.28
RPL39-202ENST00000468844 ACPTQ9BZG2 426 aa16.78■□□□□ 0.28
RPL39-202ENST00000468844 SNX7Q9UNH6 387 aa16.78■□□□□ 0.28
RPL39-202ENST00000468844 TSC22D4Q9Y3Q8 395 aa16.78■□□□□ 0.28
RPL39-202ENST00000468844 MAGEB17A8MXT2 336 aa16.78■□□□□ 0.28
RPL39-202ENST00000468844 CDH3P22223 829 aa16.78■□□□□ 0.28
RPL39-202ENST00000468844 GRK3P35626 688 aa16.78■□□□□ 0.28
RPL39-202ENST00000468844 HMGCS1Q01581 520 aa16.78■□□□□ 0.28
RPL39-202ENST00000468844 RBBP5Q15291 538 aaKnown RBP16.78■□□□□ 0.28
RPL39-202ENST00000468844 ZIC1Q15915 447 aa16.78■□□□□ 0.28
RPL39-202ENST00000468844 INAVAQ3KP66 663 aa16.78■□□□□ 0.28
RPL39-202ENST00000468844 FIGLAQ6QHK4 219 aa16.78■□□□□ 0.28
RPL39-202ENST00000468844 ALYREFQ86V81 257 aaKnown RBP16.78■□□□□ 0.28
RPL39-202ENST00000468844 CACNA2D3Q8IZS8 1091 aa16.78■□□□□ 0.28
RPL39-202ENST00000468844 BAHD1Q8TBE0 780 aaPredicted RBP16.78■□□□□ 0.28
RPL39-202ENST00000468844 IFI44Q8TCB0 444 aa16.78■□□□□ 0.28
RPL39-202ENST00000468844 RHBDD1Q8TEB9 315 aa16.78■□□□□ 0.28
RPL39-202ENST00000468844 RILPQ96NA2 401 aa16.78■□□□□ 0.28
RPL39-202ENST00000468844 FCRL4Q96PJ5 515 aa16.78■□□□□ 0.28
RPL39-202ENST00000468844 PITHD1Q9GZP4 211 aaPredicted RBP16.78■□□□□ 0.28
RPL39-202ENST00000468844 AKTIPQ9H8T0 292 aa16.78■□□□□ 0.28
RPL39-202ENST00000468844 A0A1W2PQM1 296 aa16.77■□□□□ 0.28
RPL39-202ENST00000468844 TRBC2A0A5B9 178 aa16.77■□□□□ 0.28
RPL39-202ENST00000468844 SERTM1A2A2V5 107 aa16.77■□□□□ 0.28
RPL39-202ENST00000468844 E9PBE3 544 aa16.77■□□□□ 0.28
RPL39-202ENST00000468844 ZW10O43264 779 aa16.77■□□□□ 0.28
RPL39-202ENST00000468844 OR1F1O43749 312 aa16.77■□□□□ 0.28
RPL39-202ENST00000468844 KLHL41O60662 606 aa16.77■□□□□ 0.28
RPL39-202ENST00000468844 CTSVO60911 334 aa16.77■□□□□ 0.28
RPL39-202ENST00000468844 ETHE1O95571 254 aa16.77■□□□□ 0.28
RPL39-202ENST00000468844 TBX6O95947 436 aaPredicted RBP16.77■□□□□ 0.28
RPL39-202ENST00000468844 BCL6P41182 706 aa16.77■□□□□ 0.28
RPL39-202ENST00000468844 SCTRP47872 440 aa16.77■□□□□ 0.28
RPL39-202ENST00000468844 ZNF33BQ06732 778 aa16.77■□□□□ 0.28
RPL39-202ENST00000468844 USP53Q70EK8 1073 aa16.77■□□□□ 0.28
RPL39-202ENST00000468844 ANKS4BQ8N8V4 417 aa16.77■□□□□ 0.28
RPL39-202ENST00000468844 ACTRT2Q8TDY3 377 aa16.77■□□□□ 0.28
RPL39-202ENST00000468844 CCT6BQ92526 530 aa16.77■□□□□ 0.28
RPL39-202ENST00000468844 TUBGCP3Q96CW5 907 aa16.77■□□□□ 0.28
RPL39-202ENST00000468844 CNDP2Q96KP4 475 aaKnown RBP16.77■□□□□ 0.28
RPL39-202ENST00000468844 TRAPPC9Q96Q05 1148 aa16.77■□□□□ 0.28
RPL39-202ENST00000468844 RHBGQ9H310 441 aa16.77■□□□□ 0.28
RPL39-202ENST00000468844 SEMA6CQ9H3T2 930 aa16.77■□□□□ 0.28
RPL39-202ENST00000468844 NT5DC2Q9H857 520 aa16.77■□□□□ 0.28
RPL39-202ENST00000468844 C1GALT1Q9NS00 363 aa16.77■□□□□ 0.28
RPL39-202ENST00000468844 TMEM9Q9P0T7 183 aa16.77■□□□□ 0.28
RPL39-202ENST00000468844 ANKMY1Q9P2S6 941 aa16.77■□□□□ 0.28
RPL39-202ENST00000468844 APOBEC2Q9Y235 224 aaKnown RBP16.77■□□□□ 0.28
RPL39-202ENST00000468844 MN1Q10571 1320 aaPredicted RBP16.77■□□□□ 0.27
RPL39-202ENST00000468844 FER1L5A0AVI2 2057 aa16.77■□□□□ 0.27
RPL39-202ENST00000468844 TLCD2A6NGC4 264 aa16.76■□□□□ 0.27
RPL39-202ENST00000468844 LSM1O15116 133 aaKnown RBP16.76■□□□□ 0.27
RPL39-202ENST00000468844 GDF9O60383 454 aa16.76■□□□□ 0.27
RPL39-202ENST00000468844 PRR35P0CG20 571 aa16.76■□□□□ 0.27
RPL39-202ENST00000468844 CSTF3Q12996 717 aaKnown RBP16.76■□□□□ 0.27
RPL39-202ENST00000468844 C10orf62Q5T681 223 aaPredicted RBP16.76■□□□□ 0.27
RPL39-202ENST00000468844 ACAD11Q709F0 780 aa16.76■□□□□ 0.27
RPL39-202ENST00000468844 CEP70Q8NHQ1 597 aa16.76■□□□□ 0.27
RPL39-202ENST00000468844 ZDHHC12Q96GR4 267 aa16.76■□□□□ 0.27
RPL39-202ENST00000468844 NUDT22Q9BRQ3 303 aa16.76■□□□□ 0.27
RPL39-202ENST00000468844 BRF2Q9HAW0 419 aa16.76■□□□□ 0.27
RPL39-202ENST00000468844 DMRT3Q9NQL9 472 aa16.76■□□□□ 0.27
RPL39-202ENST00000468844 PFDN4Q9NQP4 134 aa16.76■□□□□ 0.27
RPL39-202ENST00000468844 HEY2Q9UBP5 337 aa16.76■□□□□ 0.27
RPL39-202ENST00000468844 KLHL3Q9UH77 587 aa16.76■□□□□ 0.27
RPL39-202ENST00000468844 PCDHGA4Q9Y5G9 962 aa16.76■□□□□ 0.27
RPL39-202ENST00000468844 NUP214P35658 2090 aaPredicted RBP16.76■□□□□ 0.27
RPL39-202ENST00000468844 C4orf47A7E2U8 309 aa16.76■□□□□ 0.27
RPL39-202ENST00000468844 SH3BP5O60239 455 aa16.76■□□□□ 0.27
RPL39-202ENST00000468844 C9P02748 559 aa16.76■□□□□ 0.27
RPL39-202ENST00000468844 EZRP15311 586 aaKnown RBP16.76■□□□□ 0.27
RPL39-202ENST00000468844 PIK3CBP42338 1070 aa16.76■□□□□ 0.27
RPL39-202ENST00000468844 DUSP3P51452 185 aaPredicted RBP16.76■□□□□ 0.27
RPL39-202ENST00000468844 RPS13P62277 151 aaKnown RBP16.76■□□□□ 0.27
RPL39-202ENST00000468844 CYP4F2P78329 520 aa16.76■□□□□ 0.27
RPL39-202ENST00000468844 CYP4F3Q08477 520 aa16.76■□□□□ 0.27
RPL39-202ENST00000468844 IMPG1Q17R60 797 aa16.76■□□□□ 0.27
RPL39-202ENST00000468844 GALNTL6Q49A17 601 aa16.76■□□□□ 0.27
RPL39-202ENST00000468844 AASDHQ4L235 1098 aaPredicted RBP16.76■□□□□ 0.27
RPL39-202ENST00000468844 TMEM198Q66K66 360 aa16.76■□□□□ 0.27
RPL39-202ENST00000468844 NXNQ6DKJ4 435 aa16.76■□□□□ 0.27
RPL39-202ENST00000468844 FBXO42Q6P3S6 717 aa16.76■□□□□ 0.27
RPL39-202ENST00000468844 WDR74Q6RFH5 385 aaPredicted RBP16.76■□□□□ 0.27
RPL39-202ENST00000468844 TMPRSS9Q7Z410 1059 aa16.76■□□□□ 0.27
RPL39-202ENST00000468844 PLXDC1Q8IUK5 500 aa16.76■□□□□ 0.27
RPL39-202ENST00000468844 NAXDQ8IW45 347 aa16.76■□□□□ 0.27
RPL39-202ENST00000468844 GBP7Q8N8V2 638 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms