RNA–Protein interactions for RNA: ENST00000468619.5

SHANK2-214, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 2

Gene SHANK2, Length 2,775 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-214ENST00000468619 NOD1Q9Y239 953 aa12.98□□□□□ -0.33
SHANK2-214ENST00000468619 ARL5AQ9Y689 179 aa12.98□□□□□ -0.33
SHANK2-214ENST00000468619 KCNE2Q9Y6J6 123 aa12.98□□□□□ -0.33
SHANK2-214ENST00000468619 IFRD1O00458 451 aaPredicted RBP12.97□□□□□ -0.33
SHANK2-214ENST00000468619 E2F3O00716 465 aa12.97□□□□□ -0.33
SHANK2-214ENST00000468619 SLC22A5O76082 557 aa12.97□□□□□ -0.33
SHANK2-214ENST00000468619 ACADMP11310 421 aa12.97□□□□□ -0.33
SHANK2-214ENST00000468619 AKAP5P24588 427 aa12.97□□□□□ -0.33
SHANK2-214ENST00000468619 HK3P52790 923 aa12.97□□□□□ -0.33
SHANK2-214ENST00000468619 PSPHP78330 225 aa12.97□□□□□ -0.33
SHANK2-214ENST00000468619 OLR1P78380 273 aa12.97□□□□□ -0.33
SHANK2-214ENST00000468619 DSC3Q14574 896 aa12.97□□□□□ -0.33
SHANK2-214ENST00000468619 IHHQ14623 411 aa12.97□□□□□ -0.33
SHANK2-214ENST00000468619 PM20D1Q6GTS8 502 aa12.97□□□□□ -0.33
SHANK2-214ENST00000468619 ZSWIM9Q86XI8 627 aa12.97□□□□□ -0.33
SHANK2-214ENST00000468619 RNF130Q86XS8 419 aa12.97□□□□□ -0.33
SHANK2-214ENST00000468619 OR13C4Q8NGS5 318 aa12.97□□□□□ -0.33
SHANK2-214ENST00000468619 LHFPL5Q8TAF8 219 aa12.97□□□□□ -0.33
SHANK2-214ENST00000468619 BLOC1S5Q8TDH9 187 aa12.97□□□□□ -0.33
SHANK2-214ENST00000468619 UTP15Q8TED0 518 aaKnown RBP12.97□□□□□ -0.33
SHANK2-214ENST00000468619 KLHL5Q96PQ7 755 aa12.97□□□□□ -0.33
SHANK2-214ENST00000468619 SPATA9Q9BWV2 254 aa12.97□□□□□ -0.33
SHANK2-214ENST00000468619 KCNN2Q9H2S1 579 aa12.97□□□□□ -0.33
SHANK2-214ENST00000468619 ABCB9Q9NP78 766 aa12.97□□□□□ -0.33
SHANK2-214ENST00000468619 OGDHLQ9ULD0 1010 aa12.97□□□□□ -0.33
SHANK2-214ENST00000468619 TRPV2Q9Y5S1 764 aa12.97□□□□□ -0.33
SHANK2-214ENST00000468619 FAM220BPB1ANY3 271 aa12.97□□□□□ -0.33
SHANK2-214ENST00000468619 SLC9A3R1O14745 358 aaPredicted RBP12.97□□□□□ -0.33
SHANK2-214ENST00000468619 OR1I1O60431 355 aa12.97□□□□□ -0.33
SHANK2-214ENST00000468619 GPC1P35052 558 aa12.97□□□□□ -0.33
SHANK2-214ENST00000468619 HMGCS1Q01581 520 aa12.97□□□□□ -0.33
SHANK2-214ENST00000468619 POU4F3Q15319 338 aa12.97□□□□□ -0.33
SHANK2-214ENST00000468619 SSX1Q16384 188 aa12.97□□□□□ -0.33
SHANK2-214ENST00000468619 DCAF4L1Q3SXM0 396 aa12.97□□□□□ -0.33
SHANK2-214ENST00000468619 FLYWCH1Q4VC44 716 aa12.97□□□□□ -0.33
SHANK2-214ENST00000468619 INO80DQ53TQ3 878 aaPredicted RBP12.97□□□□□ -0.33
SHANK2-214ENST00000468619 ZNF605Q86T29 641 aa12.97□□□□□ -0.33
SHANK2-214ENST00000468619 MARVELD3Q96A59 401 aa12.97□□□□□ -0.33
SHANK2-214ENST00000468619 AARSD1Q9BTE6 412 aaKnown RBP12.97□□□□□ -0.33
SHANK2-214ENST00000468619 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.97□□□□□ -0.331e-6■■■■■ 33.3
SHANK2-214ENST00000468619 PPIL3Q9H2H8 161 aaKnown RBP12.97□□□□□ -0.33
SHANK2-214ENST00000468619 SLC6A14Q9UN76 642 aa12.97□□□□□ -0.33
SHANK2-214ENST00000468619 SAMD4AQ9UPU9 718 aaKnown RBP12.97□□□□□ -0.33
SHANK2-214ENST00000468619 FABP12A6NFH5 140 aa12.96□□□□□ -0.33
SHANK2-214ENST00000468619 MROH6A6NGR9 719 aa12.96□□□□□ -0.33
SHANK2-214ENST00000468619 F9P00740 461 aa12.96□□□□□ -0.33
SHANK2-214ENST00000468619 CPN2P22792 545 aa12.96□□□□□ -0.33
SHANK2-214ENST00000468619 EVI2BP34910 448 aa12.96□□□□□ -0.33
SHANK2-214ENST00000468619 PRMT2P55345 433 aa12.96□□□□□ -0.33
SHANK2-214ENST00000468619 RAB25P57735 213 aa12.96□□□□□ -0.33
SHANK2-214ENST00000468619 DSC2Q02487 901 aa12.96□□□□□ -0.33
SHANK2-214ENST00000468619 RUNX1T1Q06455 604 aa12.96□□□□□ -0.33
SHANK2-214ENST00000468619 FOXD4Q12950 439 aaPredicted RBP12.96□□□□□ -0.33
SHANK2-214ENST00000468619 SLC14A1Q13336 389 aa12.96□□□□□ -0.33
SHANK2-214ENST00000468619 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.96□□□□□ -0.33
SHANK2-214ENST00000468619 TIMM50Q3ZCQ8 353 aa12.96□□□□□ -0.33
SHANK2-214ENST00000468619 PYDC2Q56P42 97 aa12.96□□□□□ -0.33
SHANK2-214ENST00000468619 SGO1Q5FBB7 561 aa12.96□□□□□ -0.33
SHANK2-214ENST00000468619 TIGD3Q6B0B8 471 aa12.96□□□□□ -0.33
SHANK2-214ENST00000468619 ZNF551Q7Z340 670 aaPredicted RBP12.96□□□□□ -0.33
SHANK2-214ENST00000468619 LIX1Q8N485 282 aa12.96□□□□□ -0.33
SHANK2-214ENST00000468619 DIRAS2Q96HU8 199 aa12.96□□□□□ -0.33
SHANK2-214ENST00000468619 TNIP3Q96KP6 325 aa12.96□□□□□ -0.33
SHANK2-214ENST00000468619 PSKH2Q96QS6 385 aa12.96□□□□□ -0.33
SHANK2-214ENST00000468619 GPR21Q99679 349 aa12.96□□□□□ -0.33
SHANK2-214ENST00000468619 INPP5KQ9BT40 448 aa12.96□□□□□ -0.33
SHANK2-214ENST00000468619 GTPBP2Q9BX10 602 aaKnown RBP12.96□□□□□ -0.33
SHANK2-214ENST00000468619 DERL2Q9GZP9 239 aa12.96□□□□□ -0.33
SHANK2-214ENST00000468619 TMEM45AQ9NWC5 275 aa12.96□□□□□ -0.33
SHANK2-214ENST00000468619 MS4A12Q9NXJ0 267 aa12.96□□□□□ -0.33
SHANK2-214ENST00000468619 TNPO3Q9Y5L0 923 aaKnown RBP12.96□□□□□ -0.33
SHANK2-214ENST00000468619 RALGAPA2Q2PPJ7 1873 aa12.96□□□□□ -0.33
SHANK2-214ENST00000468619 A0A1W2PQ45 241 aaPredicted RBP12.96□□□□□ -0.34
SHANK2-214ENST00000468619 A0A1W2PQY0 241 aa12.96□□□□□ -0.34
SHANK2-214ENST00000468619 SMIM30A4D0T7 59 aa12.96□□□□□ -0.34
SHANK2-214ENST00000468619 WASHC1A8K0Z3 465 aa12.96□□□□□ -0.34
SHANK2-214ENST00000468619 FFAR3O14843 346 aa12.96□□□□□ -0.34
SHANK2-214ENST00000468619 GPR42O15529 346 aa12.96□□□□□ -0.34
SHANK2-214ENST00000468619 LDB2O43679 373 aa12.96□□□□□ -0.34
SHANK2-214ENST00000468619 TSPAN19P0C672 248 aa12.96□□□□□ -0.34
SHANK2-214ENST00000468619 SOX3P41225 446 aa12.96□□□□□ -0.34
SHANK2-214ENST00000468619 GZMMP51124 257 aa12.96□□□□□ -0.34
SHANK2-214ENST00000468619 RORCP51449 518 aa12.96□□□□□ -0.34
SHANK2-214ENST00000468619 SUOXP51687 545 aa12.96□□□□□ -0.34
SHANK2-214ENST00000468619 NFE2L1Q14494 772 aa12.96□□□□□ -0.34
SHANK2-214ENST00000468619 PUS10Q3MIT2 529 aaKnown RBP12.96□□□□□ -0.34
SHANK2-214ENST00000468619 C16orf62Q7Z3J2 963 aa12.96□□□□□ -0.34
SHANK2-214ENST00000468619 CALHM3Q86XJ0 350 aa12.96□□□□□ -0.34
SHANK2-214ENST00000468619 LRRC52Q8N7C0 313 aa12.96□□□□□ -0.34
SHANK2-214ENST00000468619 B3GNT7Q8NFL0 401 aa12.96□□□□□ -0.34
SHANK2-214ENST00000468619 OR4F6Q8NGB9 312 aa12.96□□□□□ -0.34
SHANK2-214ENST00000468619 DACT3Q96B18 629 aaPredicted RBP12.96□□□□□ -0.34
SHANK2-214ENST00000468619 PLCXD1Q9NUJ7 323 aa12.96□□□□□ -0.34
SHANK2-214ENST00000468619 MPP6Q9NZW5 540 aa12.96□□□□□ -0.34
SHANK2-214ENST00000468619 KLK14Q9P0G3 267 aa12.96□□□□□ -0.34
SHANK2-214ENST00000468619 CMAHPQ9Y471 501 aa12.96□□□□□ -0.34
SHANK2-214ENST00000468619 GABRDO14764 452 aa12.95□□□□□ -0.34
SHANK2-214ENST00000468619 TP53P04637 393 aaPredicted RBP12.95□□□□□ -0.34
SHANK2-214ENST00000468619 GGT2P36268 569 aa12.95□□□□□ -0.34
SHANK2-214ENST00000468619 TALDO1P37837 337 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms