RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 H7BY64 318 aa9.84□□□□□ -0.83
SSR3-205ENST00000467789 FOXS1O43638 330 aa9.84□□□□□ -0.83
SSR3-205ENST00000467789 MED26O95402 600 aa9.84□□□□□ -0.83
SSR3-205ENST00000467789 NSA2O95478 260 aaKnown RBP9.84□□□□□ -0.83
SSR3-205ENST00000467789 TSPAN12O95859 305 aa9.84□□□□□ -0.83
SSR3-205ENST00000467789 ICAM2P13598 275 aa9.84□□□□□ -0.83
SSR3-205ENST00000467789 ITGA8P53708 1063 aa9.84□□□□□ -0.83
SSR3-205ENST00000467789 EMP2P54851 167 aa9.84□□□□□ -0.83
SSR3-205ENST00000467789 CDKN2DP55273 166 aa9.84□□□□□ -0.83
SSR3-205ENST00000467789 SKP1P63208 163 aa9.84□□□□□ -0.83
SSR3-205ENST00000467789 MGAT5Q09328 741 aa9.84□□□□□ -0.83
SSR3-205ENST00000467789 ESPL1Q14674 2120 aa9.84□□□□□ -0.83
SSR3-205ENST00000467789 HKDC1Q2TB90 917 aa9.84□□□□□ -0.83
SSR3-205ENST00000467789 PLEKHN1Q494U1 663 aaPredicted RBP9.84□□□□□ -0.83
SSR3-205ENST00000467789 RBM20Q5T481 1227 aaKnown RBP9.84□□□□□ -0.83
SSR3-205ENST00000467789 FHL5Q5TD97 284 aa9.84□□□□□ -0.83
SSR3-205ENST00000467789 B3GNTL1Q67FW5 361 aaPredicted RBP9.84□□□□□ -0.83
SSR3-205ENST00000467789 DUPD1Q68J44 220 aa9.84□□□□□ -0.83
SSR3-205ENST00000467789 CAPN13Q6MZZ7 669 aaPredicted RBP9.84□□□□□ -0.83
SSR3-205ENST00000467789 NIPAL1Q6NVV3 410 aa9.84□□□□□ -0.83
SSR3-205ENST00000467789 RIPOR1Q6ZS17 1223 aa9.84□□□□□ -0.83
SSR3-205ENST00000467789 SHISA6Q6ZSJ9 500 aa9.84□□□□□ -0.83
SSR3-205ENST00000467789 NDUFAF7Q7L592 441 aa9.84□□□□□ -0.83
SSR3-205ENST00000467789 SLC26A11Q86WA9 606 aa9.84□□□□□ -0.83
SSR3-205ENST00000467789 IGDCC3Q8IVU1 814 aa9.84□□□□□ -0.83
SSR3-205ENST00000467789 TBC1D19Q8N5T2 526 aa9.84□□□□□ -0.83
SSR3-205ENST00000467789 METTL27Q8N6F8 245 aaPredicted RBP9.84□□□□□ -0.83
SSR3-205ENST00000467789 AMER3Q8N944 861 aa9.84□□□□□ -0.83
SSR3-205ENST00000467789 CAMKVQ8NCB2 501 aa9.84□□□□□ -0.83
SSR3-205ENST00000467789 LINGO1Q96FE5 620 aa9.84□□□□□ -0.83
SSR3-205ENST00000467789 PRAP1Q96NZ9 151 aa9.84□□□□□ -0.83
SSR3-205ENST00000467789 LMF1Q96S06 567 aa9.84□□□□□ -0.83
SSR3-205ENST00000467789 WDR77Q9BQA1 342 aaPredicted RBP9.84□□□□□ -0.83
SSR3-205ENST00000467789 SARGQ9BW04 601 aa9.84□□□□□ -0.83
SSR3-205ENST00000467789 RIC8BQ9NVN3 520 aa9.84□□□□□ -0.83
SSR3-205ENST00000467789 CUEDC1Q9NWM3 386 aaPredicted RBP9.84□□□□□ -0.83
SSR3-205ENST00000467789 ADAMTS6Q9UKP5 1117 aa9.84□□□□□ -0.83
SSR3-205ENST00000467789 NOVA2Q9UNW9 492 aaKnown RBP9.84□□□□□ -0.83
SSR3-205ENST00000467789 CHMP2BQ9UQN3 213 aa9.84□□□□□ -0.83
SSR3-205ENST00000467789 USP9YO00507 2555 aaPredicted RBP9.84□□□□□ -0.83
SSR3-205ENST00000467789 FAM187AA6NFU0 413 aa9.83□□□□□ -0.84
SSR3-205ENST00000467789 E7ESA3 106 aa9.83□□□□□ -0.84
SSR3-205ENST00000467789 TTI1O43156 1089 aa9.83□□□□□ -0.84
SSR3-205ENST00000467789 BANF1O75531 89 aa9.83□□□□□ -0.84
SSR3-205ENST00000467789 HEXBP07686 556 aa9.83□□□□□ -0.84
SSR3-205ENST00000467789 F7P08709 466 aaPredicted RBP9.83□□□□□ -0.84
SSR3-205ENST00000467789 SLC35G6P0C7Q6 338 aa9.83□□□□□ -0.84
SSR3-205ENST00000467789 NPPBP16860 134 aa9.83□□□□□ -0.84
SSR3-205ENST00000467789 IL10P22301 178 aa9.83□□□□□ -0.84
SSR3-205ENST00000467789 FOXL2P58012 376 aa9.83□□□□□ -0.84
SSR3-205ENST00000467789 CSNK1G2P78368 415 aa9.83□□□□□ -0.84
SSR3-205ENST00000467789 NAE1Q13564 534 aa9.83□□□□□ -0.84
SSR3-205ENST00000467789 VWA2Q5GFL6 755 aa9.83□□□□□ -0.84
SSR3-205ENST00000467789 HECTD2Q5U5R9 776 aa9.83□□□□□ -0.84
SSR3-205ENST00000467789 ISLR2Q6UXK2 745 aa9.83□□□□□ -0.84
SSR3-205ENST00000467789 MAATS1Q7Z4T9 603 aa9.83□□□□□ -0.84
SSR3-205ENST00000467789 KBTBD2Q8IY47 623 aa9.83□□□□□ -0.84
SSR3-205ENST00000467789 NKAPQ8N5F7 415 aaKnown RBP9.83□□□□□ -0.84
SSR3-205ENST00000467789 GPATCH11Q8N954 259 aa9.83□□□□□ -0.84
SSR3-205ENST00000467789 ABHD11Q8NFV4 315 aa9.83□□□□□ -0.84
SSR3-205ENST00000467789 TM4SF19Q96DZ7 209 aa9.83□□□□□ -0.84
SSR3-205ENST00000467789 CFAP36Q96G28 342 aa9.83□□□□□ -0.84
SSR3-205ENST00000467789 THOC3Q96J01 351 aaKnown RBP9.83□□□□□ -0.84
SSR3-205ENST00000467789 VPS39Q96JC1 886 aa9.83□□□□□ -0.84
SSR3-205ENST00000467789 BARD1Q99728 777 aaKnown RBP9.83□□□□□ -0.84
SSR3-205ENST00000467789 YIPF2Q9BWQ6 316 aa9.83□□□□□ -0.84
SSR3-205ENST00000467789 PLAC1Q9HBJ0 212 aa9.83□□□□□ -0.84
SSR3-205ENST00000467789 AGPAT4Q9NRZ5 378 aa9.83□□□□□ -0.84
SSR3-205ENST00000467789 ABCF3Q9NUQ8 709 aa9.83□□□□□ -0.84
SSR3-205ENST00000467789 ARL15Q9NXU5 204 aa9.83□□□□□ -0.84
SSR3-205ENST00000467789 MOCS1Q9NZB8 636 aa9.83□□□□□ -0.84
SSR3-205ENST00000467789 SLC22A7Q9Y694 548 aa9.83□□□□□ -0.84
SSR3-205ENST00000467789 CNTRLQ7Z7A1 2325 aa9.83□□□□□ -0.84
SSR3-205ENST00000467789 MAST4O15021 2626 aa9.83□□□□□ -0.84
SSR3-205ENST00000467789 LOC102723996A0A087X1L8 192 aa9.82□□□□□ -0.84
SSR3-205ENST00000467789 IGHV1-45A0A0A0MS14 117 aa9.82□□□□□ -0.84
SSR3-205ENST00000467789 A0A0A6YYC8 382 aaPredicted RBP9.82□□□□□ -0.84
SSR3-205ENST00000467789 I3L1I5 382 aaPredicted RBP9.82□□□□□ -0.84
SSR3-205ENST00000467789 TP73O15350 636 aa9.82□□□□□ -0.84
SSR3-205ENST00000467789 EIF3HO15372 352 aaKnown RBP eCLIP9.82□□□□□ -0.84
SSR3-205ENST00000467789 SERPINA7P05543 415 aa9.82□□□□□ -0.84
SSR3-205ENST00000467789 COX6A1P12074 109 aa9.82□□□□□ -0.84
SSR3-205ENST00000467789 ZNF37AP17032 561 aaPredicted RBP9.82□□□□□ -0.84
SSR3-205ENST00000467789 GNLYP22749 145 aa9.82□□□□□ -0.84
SSR3-205ENST00000467789 TSFMP43897 325 aaKnown RBP9.82□□□□□ -0.84
SSR3-205ENST00000467789 CCR8P51685 355 aa9.82□□□□□ -0.84
SSR3-205ENST00000467789 CDKL1Q00532 357 aa9.82□□□□□ -0.84
SSR3-205ENST00000467789 PDIA2Q13087 525 aaKnown RBP9.82□□□□□ -0.84
SSR3-205ENST00000467789 CALCOCO2Q13137 446 aa9.82□□□□□ -0.84
SSR3-205ENST00000467789 MFAP5Q13361 173 aa9.82□□□□□ -0.84
SSR3-205ENST00000467789 PWP1Q13610 501 aa9.82□□□□□ -0.84
SSR3-205ENST00000467789 TLR1Q15399 786 aa9.82□□□□□ -0.84
SSR3-205ENST00000467789 PHKG1Q16816 387 aa9.82□□□□□ -0.84
SSR3-205ENST00000467789 CRB2Q5IJ48 1285 aa9.82□□□□□ -0.84
SSR3-205ENST00000467789 TMEM214Q6NUQ4 689 aaKnown RBP9.82□□□□□ -0.84
SSR3-205ENST00000467789 RPUSD3Q6P087 351 aaKnown RBP9.82□□□□□ -0.84
SSR3-205ENST00000467789 TRMT10BQ6PF06 316 aaKnown RBP9.82□□□□□ -0.84
SSR3-205ENST00000467789 TMEM205Q6UW68 189 aa9.82□□□□□ -0.84
SSR3-205ENST00000467789 VN1R4Q7Z5H5 301 aa9.82□□□□□ -0.84
SSR3-205ENST00000467789 STRA8Q7Z7C7 330 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms