RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 PCBP2Q15366 365 aaKnown RBP eCLIP13.35□□□□□ -0.27
BRAT1-203ENST00000467558 CDKL4Q5MAI5 379 aa13.35□□□□□ -0.27
BRAT1-203ENST00000467558 KBTBD2Q8IY47 623 aa13.35□□□□□ -0.27
BRAT1-203ENST00000467558 PTERQ96BW5 349 aa13.35□□□□□ -0.27
BRAT1-203ENST00000467558 KLHDC7BQ96G42 594 aa13.35□□□□□ -0.27
BRAT1-203ENST00000467558 PYURFQ96I23 114 aa13.35□□□□□ -0.27
BRAT1-203ENST00000467558 MYRFLQ96LU7 910 aa13.35□□□□□ -0.27
BRAT1-203ENST00000467558 KLHL25Q9H0H3 589 aa13.35□□□□□ -0.27
BRAT1-203ENST00000467558 EHD3Q9NZN3 535 aa13.35□□□□□ -0.27
BRAT1-203ENST00000467558 HOXD9P28356 352 aaPredicted RBP13.35□□□□□ -0.27
BRAT1-203ENST00000467558 ARF5P84085 180 aa13.35□□□□□ -0.27
BRAT1-203ENST00000467558 TOR1AIP1Q5JTV8 583 aa13.35□□□□□ -0.27
BRAT1-203ENST00000467558 GPR153Q6NV75 609 aa13.35□□□□□ -0.27
BRAT1-203ENST00000467558 COMMD2Q86X83 199 aa13.35□□□□□ -0.27
BRAT1-203ENST00000467558 OR10G2Q8NGC3 310 aa13.35□□□□□ -0.27
BRAT1-203ENST00000467558 WDR92Q96MX6 357 aa13.35□□□□□ -0.27
BRAT1-203ENST00000467558 POLR2J3Q9H1A7 115 aaKnown RBP13.35□□□□□ -0.27
BRAT1-203ENST00000467558 ZSCAN32Q9NX65 697 aa13.35□□□□□ -0.27
BRAT1-203ENST00000467558 CDH7Q9ULB5 785 aa13.35□□□□□ -0.27
BRAT1-203ENST00000467558 CDC14AQ9UNH5 594 aa13.35□□□□□ -0.27
BRAT1-203ENST00000467558 PSMD11O00231 422 aa13.35□□□□□ -0.27
BRAT1-203ENST00000467558 TRMUO75648 421 aaKnown RBP13.35□□□□□ -0.27
BRAT1-203ENST00000467558 HRH2P25021 359 aa13.35□□□□□ -0.27
BRAT1-203ENST00000467558 MAGEA3P43357 314 aa13.35□□□□□ -0.27
BRAT1-203ENST00000467558 MEF2AQ02078 507 aaPredicted RBP13.35□□□□□ -0.27
BRAT1-203ENST00000467558 COQ5Q5HYK3 327 aa13.35□□□□□ -0.27
BRAT1-203ENST00000467558 KANK2Q63ZY3 851 aa13.35□□□□□ -0.27
BRAT1-203ENST00000467558 HACD2Q6Y1H2 254 aa13.35□□□□□ -0.27
BRAT1-203ENST00000467558 MINDY1Q8N5J2 469 aa13.35□□□□□ -0.27
BRAT1-203ENST00000467558 MAPK15Q8TD08 544 aa13.35□□□□□ -0.27
BRAT1-203ENST00000467558 ZNF570Q96NI8 536 aa13.35□□□□□ -0.27
BRAT1-203ENST00000467558 ZNF334Q9HCZ1 680 aaPredicted RBP13.35□□□□□ -0.27
BRAT1-203ENST00000467558 PTGDR2Q9Y5Y4 395 aa13.35□□□□□ -0.27
BRAT1-203ENST00000467558 OPN1SWP03999 348 aa13.34□□□□□ -0.27
BRAT1-203ENST00000467558 TBPL1P62380 186 aa13.34□□□□□ -0.27
BRAT1-203ENST00000467558 ZNF311Q5JNZ3 666 aa13.34□□□□□ -0.27
BRAT1-203ENST00000467558 ATG9BQ674R7 924 aa13.34□□□□□ -0.27
BRAT1-203ENST00000467558 ZNF57Q68EA5 555 aaPredicted RBP13.34□□□□□ -0.27
BRAT1-203ENST00000467558 SHKBP1Q8TBC3 707 aa13.34□□□□□ -0.27
BRAT1-203ENST00000467558 RFKQ969G6 155 aa13.34□□□□□ -0.27
BRAT1-203ENST00000467558 NKX2-4Q9H2Z4 354 aa13.34□□□□□ -0.27
BRAT1-203ENST00000467558 STON1Q9Y6Q2 735 aa13.34□□□□□ -0.27
BRAT1-203ENST00000467558 CDK5RAP2Q96SN8 1893 aa13.34□□□□□ -0.27
BRAT1-203ENST00000467558 RNGTTO60942 597 aaKnown RBP13.34□□□□□ -0.27
BRAT1-203ENST00000467558 CCT3P49368 545 aaKnown RBP13.34□□□□□ -0.27
BRAT1-203ENST00000467558 TEX26Q8N6G2 289 aa13.34□□□□□ -0.27
BRAT1-203ENST00000467558 GPR26Q8NDV2 337 aa13.34□□□□□ -0.27
BRAT1-203ENST00000467558 ENKURQ8TC29 256 aa13.34□□□□□ -0.27
BRAT1-203ENST00000467558 PRR11Q96HE9 360 aaPredicted RBP13.34□□□□□ -0.27
BRAT1-203ENST00000467558 OSBPL10Q9BXB5 764 aa13.34□□□□□ -0.27
BRAT1-203ENST00000467558 YTHDF1Q9BYJ9 559 aaKnown RBP13.34□□□□□ -0.27
BRAT1-203ENST00000467558 GSTO2Q9H4Y5 243 aa13.34□□□□□ -0.27
BRAT1-203ENST00000467558 MVB12BQ9H7P6 319 aa13.34□□□□□ -0.27
BRAT1-203ENST00000467558 LRRC42Q9Y546 428 aa13.34□□□□□ -0.27
BRAT1-203ENST00000467558 A0A096LPI6 279 aa13.34□□□□□ -0.27
BRAT1-203ENST00000467558 LILRB3O75022 631 aa13.34□□□□□ -0.27
BRAT1-203ENST00000467558 ALOX5P09917 674 aa13.34□□□□□ -0.27
BRAT1-203ENST00000467558 ATXN1LP0C7T5 689 aaKnown RBP13.34□□□□□ -0.27
BRAT1-203ENST00000467558 PSMA1P25786 263 aaKnown RBP13.34□□□□□ -0.27
BRAT1-203ENST00000467558 TIA1P31483 386 aaKnown RBP eCLIP13.34□□□□□ -0.27
BRAT1-203ENST00000467558 RPL34P49207 117 aaKnown RBP13.34□□□□□ -0.27
BRAT1-203ENST00000467558 TARDBPQ13148 414 aaKnown RBP eCLIP13.34□□□□□ -0.27
BRAT1-203ENST00000467558 HNRNPA1L2Q32P51 320 aaKnown RBP13.34□□□□□ -0.27
BRAT1-203ENST00000467558 TMPRSS11AQ6ZMR5 421 aa13.34□□□□□ -0.27
BRAT1-203ENST00000467558 SLC9B2Q86UD5 537 aa13.34□□□□□ -0.27
BRAT1-203ENST00000467558 SLC15A3Q8IY34 581 aa13.34□□□□□ -0.27
BRAT1-203ENST00000467558 PARP8Q8N3A8 854 aa13.34□□□□□ -0.27
BRAT1-203ENST00000467558 OR4K1Q8NGD4 311 aa13.34□□□□□ -0.27
BRAT1-203ENST00000467558 FATE1Q969F0 183 aa13.34□□□□□ -0.27
BRAT1-203ENST00000467558 TCEAL4Q96EI5 215 aa13.34□□□□□ -0.27
BRAT1-203ENST00000467558 FBRSQ9HAH7 460 aa13.34□□□□□ -0.27
BRAT1-203ENST00000467558 COPS7AQ9UBW8 275 aa13.34□□□□□ -0.27
BRAT1-203ENST00000467558 HCFC2Q9Y5Z7 792 aa13.34□□□□□ -0.27
BRAT1-203ENST00000467558 TRBC2A0A5B9 178 aa13.33□□□□□ -0.27
BRAT1-203ENST00000467558 CTSOP43234 321 aaPredicted RBP13.33□□□□□ -0.27
BRAT1-203ENST00000467558 TAF13Q15543 124 aa13.33□□□□□ -0.27
BRAT1-203ENST00000467558 FAAH2Q6GMR7 532 aa13.33□□□□□ -0.27
BRAT1-203ENST00000467558 METTL2BQ6P1Q9 378 aaKnown RBP13.33□□□□□ -0.27
BRAT1-203ENST00000467558 TMEM173Q86WV6 379 aaPredicted RBP13.33□□□□□ -0.27
BRAT1-203ENST00000467558 LGI4Q8N135 537 aa13.33□□□□□ -0.27
BRAT1-203ENST00000467558 AP3S1Q92572 193 aa13.33□□□□□ -0.27
BRAT1-203ENST00000467558 C1GALT1C1Q96EU7 318 aa13.33□□□□□ -0.27
BRAT1-203ENST00000467558 YIPF4Q9BSR8 244 aa13.33□□□□□ -0.27
BRAT1-203ENST00000467558 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.33□□□□□ -0.27
BRAT1-203ENST00000467558 CWH43Q9H720 699 aa13.33□□□□□ -0.27
BRAT1-203ENST00000467558 SDK1Q7Z5N4 2213 aa13.33□□□□□ -0.28
BRAT1-203ENST00000467558 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.33□□□□□ -0.28
BRAT1-203ENST00000467558 MCIDASD6RGH6 385 aa13.33□□□□□ -0.28
BRAT1-203ENST00000467558 EEDO75530 441 aaKnown RBP13.33□□□□□ -0.28
BRAT1-203ENST00000467558 C6orf47O95873 294 aa13.33□□□□□ -0.28
BRAT1-203ENST00000467558 CEBPBP17676 345 aa13.33□□□□□ -0.28
BRAT1-203ENST00000467558 FPR1P21462 350 aa13.33□□□□□ -0.28
BRAT1-203ENST00000467558 ERVPABLB-1P60509 514 aa13.33□□□□□ -0.28
BRAT1-203ENST00000467558 CEACAM7Q14002 265 aa13.33□□□□□ -0.28
BRAT1-203ENST00000467558 RGS21Q2M5E4 152 aa13.33□□□□□ -0.28
BRAT1-203ENST00000467558 AMZ1Q400G9 498 aa13.33□□□□□ -0.28
BRAT1-203ENST00000467558 ASRGL1Q7L266 308 aa13.33□□□□□ -0.28
BRAT1-203ENST00000467558 GPR65Q8IYL9 337 aa13.33□□□□□ -0.28
BRAT1-203ENST00000467558 SCAIQ8N9R8 606 aa13.33□□□□□ -0.28
BRAT1-203ENST00000467558 OR56A1Q8NGH5 318 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms