RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 KCT2Q8NC54 265 aa11.34□□□□□ -0.59
APTX-213ENST00000465003 ABHD11Q8NFV4 315 aa11.34□□□□□ -0.59
APTX-213ENST00000465003 UBTD2Q8WUN7 234 aa11.34□□□□□ -0.59
APTX-213ENST00000465003 CRELD1Q96HD1 420 aa11.34□□□□□ -0.59
APTX-213ENST00000465003 SMC6Q96SB8 1091 aa11.34□□□□□ -0.59
APTX-213ENST00000465003 SHCBP1LQ9BZQ2 653 aa11.34□□□□□ -0.59
APTX-213ENST00000465003 IQCGQ9H095 443 aaKnown RBP11.34□□□□□ -0.59
APTX-213ENST00000465003 NOL11Q9H8H0 719 aaKnown RBP11.34□□□□□ -0.59
APTX-213ENST00000465003 DCDC2Q9UHG0 476 aa11.34□□□□□ -0.59
APTX-213ENST00000465003 PCTPQ9UKL6 214 aa11.34□□□□□ -0.59
APTX-213ENST00000465003 KLK4Q9Y5K2 254 aa11.34□□□□□ -0.59
APTX-213ENST00000465003 MRPS18BQ9Y676 258 aaKnown RBP11.34□□□□□ -0.59
APTX-213ENST00000465003 NDUFS4O43181 175 aa11.34□□□□□ -0.59
APTX-213ENST00000465003 IPO13O94829 963 aaKnown RBP11.34□□□□□ -0.59
APTX-213ENST00000465003 DLGAP3O95886 979 aa11.34□□□□□ -0.59
APTX-213ENST00000465003 EPB42P16452 691 aa11.34□□□□□ -0.59
APTX-213ENST00000465003 IRF8Q02556 426 aa11.34□□□□□ -0.59
APTX-213ENST00000465003 CLN3Q13286 438 aa11.34□□□□□ -0.59
APTX-213ENST00000465003 ZC3H12BQ5HYM0 836 aaKnown RBP11.34□□□□□ -0.59
APTX-213ENST00000465003 IL22RA1Q8N6P7 574 aa11.34□□□□□ -0.59
APTX-213ENST00000465003 KCNE4Q8WWG9 221 aa11.34□□□□□ -0.59
APTX-213ENST00000465003 CCT6BQ92526 530 aa11.34□□□□□ -0.59
APTX-213ENST00000465003 RERGQ96A58 199 aaPredicted RBP11.34□□□□□ -0.59
APTX-213ENST00000465003 C10orf90Q96M02 699 aa11.34□□□□□ -0.59
APTX-213ENST00000465003 SPRY4Q9C004 299 aa11.34□□□□□ -0.59
APTX-213ENST00000465003 IPPKQ9H8X2 491 aa11.34□□□□□ -0.59
APTX-213ENST00000465003 ZMIZ1Q9ULJ6 1067 aa11.34□□□□□ -0.59
APTX-213ENST00000465003 PCDHGA4Q9Y5G9 962 aa11.34□□□□□ -0.59
APTX-213ENST00000465003 ANKRD11Q6UB99 2663 aaPredicted RBP11.33□□□□□ -0.6
APTX-213ENST00000465003 A0A0G2JN53 185 aa11.33□□□□□ -0.6
APTX-213ENST00000465003 LOC101059948A0A1B0GTJ6 334 aa11.33□□□□□ -0.6
APTX-213ENST00000465003 C4orf51C9J302 202 aa11.33□□□□□ -0.6
APTX-213ENST00000465003 OR7A17O14581 309 aa11.33□□□□□ -0.6
APTX-213ENST00000465003 RAD1O60671 282 aa11.33□□□□□ -0.6
APTX-213ENST00000465003 CPNE3O75131 537 aaKnown RBP11.33□□□□□ -0.6
APTX-213ENST00000465003 SUPT7LO94864 414 aa11.33□□□□□ -0.6
APTX-213ENST00000465003 GSTA1P08263 222 aa11.33□□□□□ -0.6
APTX-213ENST00000465003 MYZAPP0CAP1 466 aa11.33□□□□□ -0.6
APTX-213ENST00000465003 C1GALT1C1LP0DN25 315 aa11.33□□□□□ -0.6
APTX-213ENST00000465003 MYL2P10916 166 aa11.33□□□□□ -0.6
APTX-213ENST00000465003 IL1RNP18510 177 aa11.33□□□□□ -0.6
APTX-213ENST00000465003 WT1P19544 449 aaPredicted RBP11.33□□□□□ -0.6
APTX-213ENST00000465003 F8A1P23610 371 aa11.33□□□□□ -0.6
APTX-213ENST00000465003 GRK3P35626 688 aa11.33□□□□□ -0.6
APTX-213ENST00000465003 OR1D4P47884 311 aa11.33□□□□□ -0.6
APTX-213ENST00000465003 RPS18P62269 152 aaKnown RBP11.33□□□□□ -0.6
APTX-213ENST00000465003 REEP5Q00765 189 aa11.33□□□□□ -0.6
APTX-213ENST00000465003 DDX39BQ13838 428 aaKnown RBP11.33□□□□□ -0.6
APTX-213ENST00000465003 PCLAFQ15004 111 aa11.33□□□□□ -0.6
APTX-213ENST00000465003 PCBP2Q15366 365 aaKnown RBP eCLIP11.33□□□□□ -0.6
APTX-213ENST00000465003 CDKL4Q5MAI5 379 aa11.33□□□□□ -0.6
APTX-213ENST00000465003 IGF2-ASQ6U949 168 aa11.33□□□□□ -0.6
APTX-213ENST00000465003 LRIG3Q6UXM1 1119 aa11.33□□□□□ -0.6
APTX-213ENST00000465003 ZCCHC23Q6ZST2 131 aa11.33□□□□□ -0.6
APTX-213ENST00000465003 C10orf107Q8IVU9 208 aa11.33□□□□□ -0.6
APTX-213ENST00000465003 CACNA2D3Q8IZS8 1091 aa11.33□□□□□ -0.6
APTX-213ENST00000465003 CCNYL1Q8N7R7 359 aa11.33□□□□□ -0.6
APTX-213ENST00000465003 OR4K1Q8NGD4 311 aa11.33□□□□□ -0.6
APTX-213ENST00000465003 TRPC4APQ8TEL6 797 aa11.33□□□□□ -0.6
APTX-213ENST00000465003 NKD1Q969G9 470 aa11.33□□□□□ -0.6
APTX-213ENST00000465003 ARL8AQ96BM9 186 aa11.33□□□□□ -0.6
APTX-213ENST00000465003 TEFMQ96QE5 360 aaKnown RBP11.33□□□□□ -0.6
APTX-213ENST00000465003 HBEGFQ99075 208 aa11.33□□□□□ -0.6
APTX-213ENST00000465003 ARGLU1Q9NWB6 273 aaPredicted RBP11.33□□□□□ -0.6
APTX-213ENST00000465003 GRID1Q9ULK0 1009 aa11.33□□□□□ -0.6
APTX-213ENST00000465003 PLLPQ9Y342 182 aa11.33□□□□□ -0.6
APTX-213ENST00000465003 RNF11Q9Y3C5 154 aa11.33□□□□□ -0.6
APTX-213ENST00000465003 TMEM184BQ9Y519 407 aaPredicted RBP11.33□□□□□ -0.6
APTX-213ENST00000465003 NBEAQ8NFP9 2946 aa11.33□□□□□ -0.6
APTX-213ENST00000465003 ZNF860A6NHJ4 632 aa11.32□□□□□ -0.6
APTX-213ENST00000465003 TYROBPO43914 113 aa11.32□□□□□ -0.6
APTX-213ENST00000465003 FKBP9O95302 570 aa11.32□□□□□ -0.6
APTX-213ENST00000465003 RPS17P08708 135 aaKnown RBP11.32□□□□□ -0.6
APTX-213ENST00000465003 MSL3P1P0C860 447 aa11.32□□□□□ -0.6
APTX-213ENST00000465003 LIPCP11150 499 aa11.32□□□□□ -0.6
APTX-213ENST00000465003 ITGAXP20702 1163 aa11.32□□□□□ -0.6
APTX-213ENST00000465003 ATP5F1P24539 256 aaPredicted RBP11.32□□□□□ -0.6
APTX-213ENST00000465003 FOXK2Q01167 660 aa11.32□□□□□ -0.6
APTX-213ENST00000465003 MPP2Q14168 576 aa11.32□□□□□ -0.6
APTX-213ENST00000465003 RBBP7Q16576 425 aa11.32□□□□□ -0.6
APTX-213ENST00000465003 CPSF6Q16630 551 aaKnown RBP eCLIP11.32□□□□□ -0.6
APTX-213ENST00000465003 SYT16Q17RD7 645 aa11.32□□□□□ -0.6
APTX-213ENST00000465003 UNC50Q53HI1 259 aa11.32□□□□□ -0.6
APTX-213ENST00000465003 ZNF678Q5SXM1 525 aa11.32□□□□□ -0.6
APTX-213ENST00000465003 ATG9BQ674R7 924 aa11.32□□□□□ -0.6
APTX-213ENST00000465003 C6orf15Q6UXA7 325 aaPredicted RBP11.32□□□□□ -0.6
APTX-213ENST00000465003 ZYG11AQ6WRX3 759 aa11.32□□□□□ -0.6
APTX-213ENST00000465003 DTX1Q86Y01 620 aa11.32□□□□□ -0.6
APTX-213ENST00000465003 KLHDC8AQ8IYD2 350 aa11.32□□□□□ -0.6
APTX-213ENST00000465003 NLGN4XQ8N0W4 816 aa11.32□□□□□ -0.6
APTX-213ENST00000465003 NLGN4YQ8NFZ3 816 aaPredicted RBP11.32□□□□□ -0.6
APTX-213ENST00000465003 SLC13A3Q8WWT9 602 aa11.32□□□□□ -0.6
APTX-213ENST00000465003 MR1Q95460 341 aa11.32□□□□□ -0.6
APTX-213ENST00000465003 ATP6V1E2Q96A05 226 aa11.32□□□□□ -0.6
APTX-213ENST00000465003 MTFMTQ96DP5 389 aaKnown RBP11.32□□□□□ -0.6
APTX-213ENST00000465003 AIF1LQ9BQI0 150 aa11.32□□□□□ -0.6
APTX-213ENST00000465003 NDC1Q9BTX1 674 aa11.32□□□□□ -0.6
APTX-213ENST00000465003 AICDAQ9GZX7 198 aa11.32□□□□□ -0.6
APTX-213ENST00000465003 CHRNA10Q9GZZ6 450 aa11.32□□□□□ -0.6
APTX-213ENST00000465003 CHST8Q9H2A9 424 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms