RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 ADAP2Q9NPF8 381 aa8.8□□□□□ -1
HPS4-208ENST00000464362 TREX1Q9NSU2 369 aa8.8□□□□□ -1
HPS4-208ENST00000464362 TAC3Q9UHF0 121 aa8.8□□□□□ -1
HPS4-208ENST00000464362 ZNF780BQ9Y6R6 833 aa8.8□□□□□ -1
HPS4-208ENST00000464362 ABHD14A-ACY1A0A1B0GW23 586 aa8.8□□□□□ -1
HPS4-208ENST00000464362 EEDO75530 441 aaKnown RBP8.8□□□□□ -1
HPS4-208ENST00000464362 IFI30P13284 250 aa8.8□□□□□ -1
HPS4-208ENST00000464362 ACP5P13686 325 aa8.8□□□□□ -1
HPS4-208ENST00000464362 ANXA8P13928 327 aa8.8□□□□□ -1
HPS4-208ENST00000464362 DNAJB1P25685 340 aa8.8□□□□□ -1
HPS4-208ENST00000464362 ATP4BP51164 291 aa8.8□□□□□ -1
HPS4-208ENST00000464362 BCAP31P51572 246 aa8.8□□□□□ -1
HPS4-208ENST00000464362 CD83Q01151 205 aa8.8□□□□□ -1
HPS4-208ENST00000464362 ST3GAL4Q11206 333 aa8.8□□□□□ -1
HPS4-208ENST00000464362 NOGQ13253 232 aa8.8□□□□□ -1
HPS4-208ENST00000464362 SEMA3AQ14563 771 aa8.8□□□□□ -1
HPS4-208ENST00000464362 PLEKHG6Q3KR16 790 aa8.8□□□□□ -1
HPS4-208ENST00000464362 CCDC157Q569K6 752 aa8.8□□□□□ -1
HPS4-208ENST00000464362 KIAA1614Q5VZ46 1190 aa8.8□□□□□ -1
HPS4-208ENST00000464362 BHLHB9Q6PI77 547 aa8.8□□□□□ -1
HPS4-208ENST00000464362 MMAAQ8IVH4 418 aaKnown RBP8.8□□□□□ -1
HPS4-208ENST00000464362 TCEANCQ8N8B7 351 aa8.8□□□□□ -1
HPS4-208ENST00000464362 MDGA1Q8NFP4 955 aa8.8□□□□□ -1
HPS4-208ENST00000464362 LGALS12Q96DT0 336 aa8.8□□□□□ -1
HPS4-208ENST00000464362 NARS2Q96I59 477 aaKnown RBP8.8□□□□□ -1
HPS4-208ENST00000464362 ZNF597Q96LX8 424 aa8.8□□□□□ -1
HPS4-208ENST00000464362 SPATA5L1Q9BVQ7 753 aa8.8□□□□□ -1
HPS4-208ENST00000464362 RNF6Q9Y252 685 aa8.8□□□□□ -1
HPS4-208ENST00000464362 TMEM98Q9Y2Y6 226 aa8.8□□□□□ -1
HPS4-208ENST00000464362 PCDHGA8Q9Y5G5 932 aa8.8□□□□□ -1
HPS4-208ENST00000464362 PEX16Q9Y5Y5 336 aa8.8□□□□□ -1
HPS4-208ENST00000464362 LRP5O75197 1615 aa8.8□□□□□ -1
HPS4-208ENST00000464362 MBLAC1A4D2B0 266 aaPredicted RBP8.8□□□□□ -1
HPS4-208ENST00000464362 PCP4L1A6NKN8 68 aa8.8□□□□□ -1
HPS4-208ENST00000464362 H3BSH0 61 aa8.8□□□□□ -1
HPS4-208ENST00000464362 SLC1A7O00341 560 aa8.8□□□□□ -1
HPS4-208ENST00000464362 UBFD1O14562 309 aaKnown RBP8.8□□□□□ -1
HPS4-208ENST00000464362 PGRMC2O15173 223 aa8.8□□□□□ -1
HPS4-208ENST00000464362 CA12O43570 354 aa8.8□□□□□ -1
HPS4-208ENST00000464362 TSPAN6O43657 245 aa8.8□□□□□ -1
HPS4-208ENST00000464362 EFCAB14O75071 495 aa8.8□□□□□ -1
HPS4-208ENST00000464362 ZNF623O75123 536 aa8.8□□□□□ -1
HPS4-208ENST00000464362 STX11O75558 287 aa8.8□□□□□ -1
HPS4-208ENST00000464362 MLLT1Q03111 559 aaPredicted RBP8.8□□□□□ -1
HPS4-208ENST00000464362 VMACQ2NL98 169 aa8.8□□□□□ -1
HPS4-208ENST00000464362 DPY19L1Q2PZI1 675 aa8.8□□□□□ -1
HPS4-208ENST00000464362 KCTD11Q693B1 232 aa8.8□□□□□ -1
HPS4-208ENST00000464362 ASB18Q6ZVZ8 466 aa8.8□□□□□ -1
HPS4-208ENST00000464362 CLEC14AQ86T13 490 aa8.8□□□□□ -1
HPS4-208ENST00000464362 NPAS3Q8IXF0 933 aa8.8□□□□□ -1
HPS4-208ENST00000464362 COLGALT2Q8IYK4 626 aa8.8□□□□□ -1
HPS4-208ENST00000464362 CD200R1Q8TD46 325 aa8.8□□□□□ -1
HPS4-208ENST00000464362 SLC22A17Q8WUG5 538 aa8.8□□□□□ -1
HPS4-208ENST00000464362 SLC38A4Q969I6 547 aa8.8□□□□□ -1
HPS4-208ENST00000464362 TRNT1Q96Q11 434 aaKnown RBP8.8□□□□□ -1
HPS4-208ENST00000464362 YTHDF1Q9BYJ9 559 aaKnown RBP8.8□□□□□ -1
HPS4-208ENST00000464362 TTTY10Q9BZA0 68 aa8.8□□□□□ -1
HPS4-208ENST00000464362 SP140LQ9H930 580 aa8.8□□□□□ -1
HPS4-208ENST00000464362 ZNF282Q9UDV7 671 aaPredicted RBP8.8□□□□□ -1
HPS4-208ENST00000464362 PCDHB14Q9Y5E9 798 aa8.8□□□□□ -1
HPS4-208ENST00000464362 DNMT3AQ9Y6K1 912 aaPredicted RBP8.8□□□□□ -1
HPS4-208ENST00000464362 ZNF840PA6NDX5 716 aa8.79□□□□□ -1
HPS4-208ENST00000464362 TRIM64CA6NLI5 447 aa8.79□□□□□ -1
HPS4-208ENST00000464362 SLC30A4O14863 429 aa8.79□□□□□ -1
HPS4-208ENST00000464362 ZW10O43264 779 aa8.79□□□□□ -1
HPS4-208ENST00000464362 HCN1O60741 890 aa8.79□□□□□ -1
HPS4-208ENST00000464362 POP7O75817 140 aaKnown RBP8.79□□□□□ -1
HPS4-208ENST00000464362 LAMP2P13473 410 aa8.79□□□□□ -1
HPS4-208ENST00000464362 TLX1P31314 330 aaPredicted RBP8.79□□□□□ -1
HPS4-208ENST00000464362 CSTF2P33240 577 aaKnown RBP eCLIP8.79□□□□□ -1
HPS4-208ENST00000464362 OPRL1P41146 370 aa8.79□□□□□ -1
HPS4-208ENST00000464362 CLCN4P51793 760 aa8.79□□□□□ -1
HPS4-208ENST00000464362 OR2B6P58173 313 aa8.79□□□□□ -1
HPS4-208ENST00000464362 RAB8AP61006 207 aa8.79□□□□□ -1
HPS4-208ENST00000464362 SCN1BQ07699 218 aa8.79□□□□□ -1
HPS4-208ENST00000464362 TUBB3Q13509 450 aa8.79□□□□□ -1
HPS4-208ENST00000464362 MYBPC3Q14896 1274 aa8.79□□□□□ -1
HPS4-208ENST00000464362 HEPACAMQ14CZ8 416 aa8.79□□□□□ -1
HPS4-208ENST00000464362 LY6G5CQ5SRR4 150 aa8.79□□□□□ -1
HPS4-208ENST00000464362 NEK5Q6P3R8 708 aa8.79□□□□□ -1
HPS4-208ENST00000464362 CADM2Q8N3J6 435 aa8.79□□□□□ -1
HPS4-208ENST00000464362 OR14C36Q8NHC7 312 aa8.79□□□□□ -1
HPS4-208ENST00000464362 HDAC2Q92769 488 aaKnown RBP8.79□□□□□ -1
HPS4-208ENST00000464362 DNASE1L2Q92874 299 aa8.79□□□□□ -1
HPS4-208ENST00000464362 FEVQ99581 238 aa8.79□□□□□ -1
HPS4-208ENST00000464362 OSBPL10Q9BXB5 764 aa8.79□□□□□ -1
HPS4-208ENST00000464362 ITPAQ9BY32 194 aa8.79□□□□□ -1
HPS4-208ENST00000464362 SACM1LQ9NTJ5 587 aa8.79□□□□□ -1
HPS4-208ENST00000464362 THG1LQ9NWX6 298 aaKnown RBP8.79□□□□□ -1
HPS4-208ENST00000464362 GPRC5BQ9NZH0 403 aa8.79□□□□□ -1
HPS4-208ENST00000464362 TMEM9Q9P0T7 183 aa8.79□□□□□ -1
HPS4-208ENST00000464362 RABL2BQ9UNT1 228 aa8.79□□□□□ -1
HPS4-208ENST00000464362 CEPT1Q9Y6K0 416 aa8.79□□□□□ -1
HPS4-208ENST00000464362 COL2A1P02458 1487 aaPredicted RBP8.79□□□□□ -1
HPS4-208ENST00000464362 TLL1O43897 1013 aa8.79□□□□□ -1
HPS4-208ENST00000464362 MMP20O60882 483 aa8.79□□□□□ -1
HPS4-208ENST00000464362 AOC2O75106 756 aa8.79□□□□□ -1
HPS4-208ENST00000464362 ETFAP13804 333 aa8.79□□□□□ -1
HPS4-208ENST00000464362 MYF6P23409 242 aa8.79□□□□□ -1
HPS4-208ENST00000464362 SLC15A1P46059 708 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms