RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 CPEB2Q7Z5Q1 589 aaKnown RBP7.25□□□□□ -1.25
SMC3-202ENST00000462899 ANKRD37Q7Z713 158 aa7.25□□□□□ -1.25
SMC3-202ENST00000462899 PCGF5Q86SE9 256 aa7.25□□□□□ -1.25
SMC3-202ENST00000462899 PAQR7Q86WK9 346 aa7.25□□□□□ -1.25
SMC3-202ENST00000462899 CCDC71Q8IV32 467 aaPredicted RBP7.25□□□□□ -1.25
SMC3-202ENST00000462899 ARMC10Q8N2F6 343 aa7.25□□□□□ -1.25
SMC3-202ENST00000462899 SLC35G2Q8TBE7 412 aa7.25□□□□□ -1.25
SMC3-202ENST00000462899 M1APQ8TC57 530 aa7.25□□□□□ -1.25
SMC3-202ENST00000462899 CABS1Q96KC9 395 aa7.25□□□□□ -1.25
SMC3-202ENST00000462899 C18orf12Q96KH6 178 aa7.25□□□□□ -1.25
SMC3-202ENST00000462899 OR2A5Q96R48 311 aa7.25□□□□□ -1.25
SMC3-202ENST00000462899 CYTH2Q99418 400 aa7.25□□□□□ -1.25
SMC3-202ENST00000462899 MIPEPQ99797 713 aa7.25□□□□□ -1.25
SMC3-202ENST00000462899 TBL1YQ9BQ87 522 aa7.25□□□□□ -1.25
SMC3-202ENST00000462899 GPATCH1Q9BRR8 931 aaKnown RBP7.25□□□□□ -1.25
SMC3-202ENST00000462899 UTP23Q9BRU9 249 aaKnown RBP7.25□□□□□ -1.25
SMC3-202ENST00000462899 RAB11FIP5Q9BXF6 653 aa7.25□□□□□ -1.25
SMC3-202ENST00000462899 TP63Q9H3D4 680 aaPredicted RBP7.25□□□□□ -1.25
SMC3-202ENST00000462899 C10orf88Q9H8K7 445 aa7.25□□□□□ -1.25
SMC3-202ENST00000462899 KCNJ16Q9NPI9 418 aa7.25□□□□□ -1.25
SMC3-202ENST00000462899 RASSF1Q9NS23 344 aa7.25□□□□□ -1.25
SMC3-202ENST00000462899 LMBRD1Q9NUN5 540 aa7.25□□□□□ -1.25
SMC3-202ENST00000462899 DDX56Q9NY93 547 aaKnown RBP7.25□□□□□ -1.25
SMC3-202ENST00000462899 LRFN1Q9P244 771 aa7.25□□□□□ -1.25
SMC3-202ENST00000462899 CDC14AQ9UNH5 594 aa7.25□□□□□ -1.25
SMC3-202ENST00000462899 PLEKHA6Q9Y2H5 1048 aa7.25□□□□□ -1.25
SMC3-202ENST00000462899 AAR2Q9Y312 384 aaKnown RBP7.25□□□□□ -1.25
SMC3-202ENST00000462899 A0A0A6YYC8 382 aaPredicted RBP7.24□□□□□ -1.25
SMC3-202ENST00000462899 A0A1B0GTH9 108 aa7.24□□□□□ -1.25
SMC3-202ENST00000462899 A8MUI8 341 aa7.24□□□□□ -1.25
SMC3-202ENST00000462899 I3L1I5 382 aaPredicted RBP7.24□□□□□ -1.25
SMC3-202ENST00000462899 PHF2O75151 1096 aa7.24□□□□□ -1.25
SMC3-202ENST00000462899 SLC25A12O75746 678 aa7.24□□□□□ -1.25
SMC3-202ENST00000462899 ATE1O95260 518 aa7.24□□□□□ -1.25
SMC3-202ENST00000462899 C1orf105O95561 183 aa7.24□□□□□ -1.25
SMC3-202ENST00000462899 RPN2P04844 631 aa7.24□□□□□ -1.25
SMC3-202ENST00000462899 GYPCP04921 128 aa7.24□□□□□ -1.25
SMC3-202ENST00000462899 EIF2S1P05198 315 aaKnown RBP7.24□□□□□ -1.25
SMC3-202ENST00000462899 OR56A5P0C7T3 313 aa7.24□□□□□ -1.25
SMC3-202ENST00000462899 BMP4P12644 408 aa7.24□□□□□ -1.25
SMC3-202ENST00000462899 TFEBP19484 476 aa7.24□□□□□ -1.25
SMC3-202ENST00000462899 AOAHP28039 575 aa7.24□□□□□ -1.25
SMC3-202ENST00000462899 MEOX1P50221 254 aa7.24□□□□□ -1.25
SMC3-202ENST00000462899 NUP107P57740 925 aa7.24□□□□□ -1.25
SMC3-202ENST00000462899 ZBED6P86452 979 aa7.24□□□□□ -1.25
SMC3-202ENST00000462899 MAT1AQ00266 395 aaKnown RBP7.24□□□□□ -1.25
SMC3-202ENST00000462899 TNP2Q05952 138 aa7.24□□□□□ -1.25
SMC3-202ENST00000462899 MYBPHQ13203 477 aa7.24□□□□□ -1.25
SMC3-202ENST00000462899 FAM53BQ14153 422 aa7.24□□□□□ -1.25
SMC3-202ENST00000462899 SLC18A3Q16572 532 aa7.24□□□□□ -1.25
SMC3-202ENST00000462899 ANKRD20A2Q5SQ80 823 aa7.24□□□□□ -1.25
SMC3-202ENST00000462899 ANKRD20A1Q5TYW2 823 aa7.24□□□□□ -1.25
SMC3-202ENST00000462899 ANKRD20A3Q5VUR7 823 aa7.24□□□□□ -1.25
SMC3-202ENST00000462899 ITPRIPL1Q6GPH6 555 aa7.24□□□□□ -1.25
SMC3-202ENST00000462899 LRRC8BQ6P9F7 803 aa7.24□□□□□ -1.25
SMC3-202ENST00000462899 LYPD4Q6UWN0 246 aa7.24□□□□□ -1.25
SMC3-202ENST00000462899 TAS2R42Q7RTR8 314 aa7.24□□□□□ -1.25
SMC3-202ENST00000462899 CAMKMTQ7Z624 323 aa7.24□□□□□ -1.25
SMC3-202ENST00000462899 CSNK1A1LQ8N752 337 aa7.24□□□□□ -1.25
SMC3-202ENST00000462899 POGLUT1Q8NBL1 392 aa7.24□□□□□ -1.25
SMC3-202ENST00000462899 FAM98AQ8NCA5 519 aaKnown RBP7.24□□□□□ -1.25
SMC3-202ENST00000462899 OR13J1Q8NGT2 312 aa7.24□□□□□ -1.25
SMC3-202ENST00000462899 C16orf52Q8NHV5 167 aa7.24□□□□□ -1.25
SMC3-202ENST00000462899 ELP5Q8TE02 316 aa7.24□□□□□ -1.25
SMC3-202ENST00000462899 STYXQ8WUJ0 223 aa7.24□□□□□ -1.25
SMC3-202ENST00000462899 CTNNBL1Q8WYA6 563 aaPredicted RBP7.24□□□□□ -1.25
SMC3-202ENST00000462899 RND1Q92730 232 aa7.24□□□□□ -1.25
SMC3-202ENST00000462899 P3H4Q92791 437 aa7.24□□□□□ -1.25
SMC3-202ENST00000462899 HAUS1Q96CS2 278 aa7.24□□□□□ -1.25
SMC3-202ENST00000462899 MMABQ96EY8 250 aaPredicted RBP7.24□□□□□ -1.25
SMC3-202ENST00000462899 RMND5BQ96G75 393 aaPredicted RBP7.24□□□□□ -1.25
SMC3-202ENST00000462899 BPIFA3Q9BQP9 254 aa7.24□□□□□ -1.25
SMC3-202ENST00000462899 PLCD4Q9BRC7 762 aa7.24□□□□□ -1.25
SMC3-202ENST00000462899 POLDIP3Q9BY77 421 aaKnown RBP7.24□□□□□ -1.25
SMC3-202ENST00000462899 DRC3Q9H069 523 aa7.24□□□□□ -1.25
SMC3-202ENST00000462899 CLEC4MQ9H2X3 399 aaPredicted RBP7.24□□□□□ -1.25
SMC3-202ENST00000462899 IMPACTQ9P2X3 320 aa7.24□□□□□ -1.25
SMC3-202ENST00000462899 CAPN11Q9UMQ6 739 aa7.24□□□□□ -1.25
SMC3-202ENST00000462899 FREM3P0C091 2139 aa7.24□□□□□ -1.25
SMC3-202ENST00000462899 SVEP1Q4LDE5 3571 aa7.23□□□□□ -1.25
SMC3-202ENST00000462899 RAI1Q7Z5J4 1906 aaPredicted RBP7.23□□□□□ -1.25
SMC3-202ENST00000462899 OR2W5A6NFC9 320 aa7.23□□□□□ -1.25
SMC3-202ENST00000462899 H0YIG0 161 aa7.23□□□□□ -1.25
SMC3-202ENST00000462899 APOC4-APOC2K7ER74 178 aa7.23□□□□□ -1.25
SMC3-202ENST00000462899 PSTPIP1O43586 416 aa7.23□□□□□ -1.25
SMC3-202ENST00000462899 SUN1O94901 812 aa7.23□□□□□ -1.25
SMC3-202ENST00000462899 APOC2P02655 101 aa7.23□□□□□ -1.25
SMC3-202ENST00000462899 INHBBP09529 407 aa7.23□□□□□ -1.25
SMC3-202ENST00000462899 FAM157BP0CG42 384 aa7.23□□□□□ -1.25
SMC3-202ENST00000462899 ERVK-10P10266 1014 aa7.23□□□□□ -1.25
SMC3-202ENST00000462899 DNASE1P24855 282 aa7.23□□□□□ -1.25
SMC3-202ENST00000462899 MSNP26038 577 aaKnown RBP7.23□□□□□ -1.25
SMC3-202ENST00000462899 TPP2P29144 1249 aaPredicted RBP7.23□□□□□ -1.25
SMC3-202ENST00000462899 TRHRP34981 398 aaPredicted RBP7.23□□□□□ -1.25
SMC3-202ENST00000462899 SLC1A1P43005 524 aa7.23□□□□□ -1.25
SMC3-202ENST00000462899 BDKRB1P46663 353 aa7.23□□□□□ -1.25
SMC3-202ENST00000462899 CSE1LP55060 971 aaKnown RBP7.23□□□□□ -1.25
SMC3-202ENST00000462899 RELAQ04206 551 aa7.23□□□□□ -1.25
SMC3-202ENST00000462899 HSPA14Q0VDF9 509 aa7.23□□□□□ -1.25
SMC3-202ENST00000462899 SPARCL1Q14515 664 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms