RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	NEURL1	O76050	574 aa		10.53	□□□□□ -0.72
PTPN7-204	ENST00000462815	STATH	P02808	62 aa		10.53	□□□□□ -0.72
PTPN7-204	ENST00000462815	ANXA5	P08758	320 aa		10.53	□□□□□ -0.72
PTPN7-204	ENST00000462815	PKM	P14618	531 aa	Known RBP	10.53	□□□□□ -0.72
PTPN7-204	ENST00000462815	TPSB2	P20231	275 aa		10.53	□□□□□ -0.72
PTPN7-204	ENST00000462815	HSD17B2	P37059	387 aa		10.53	□□□□□ -0.72
PTPN7-204	ENST00000462815	ST13	P50502	369 aa	Known RBP	10.53	□□□□□ -0.72
PTPN7-204	ENST00000462815	ABAT	P80404	500 aa		10.53	□□□□□ -0.72
PTPN7-204	ENST00000462815	KIF5A	Q12840	1032 aa		10.53	□□□□□ -0.72
PTPN7-204	ENST00000462815	TPSAB1	Q15661	275 aa		10.53	□□□□□ -0.72
PTPN7-204	ENST00000462815	CCNG2	Q16589	344 aa		10.53	□□□□□ -0.72
PTPN7-204	ENST00000462815	ACER2	Q5QJU3	275 aa		10.53	□□□□□ -0.72
PTPN7-204	ENST00000462815	SEL1L2	Q5TEA6	688 aa		10.53	□□□□□ -0.72
PTPN7-204	ENST00000462815	FCRLB	Q6BAA4	426 aa		10.53	□□□□□ -0.72
PTPN7-204	ENST00000462815	MRNIP	Q6NTE8	343 aa		10.53	□□□□□ -0.72
PTPN7-204	ENST00000462815	MTFR2	Q6P444	385 aa		10.53	□□□□□ -0.72
PTPN7-204	ENST00000462815	XKRX	Q6PP77	449 aa		10.53	□□□□□ -0.72
PTPN7-204	ENST00000462815	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	10.53	□□□□□ -0.72
PTPN7-204	ENST00000462815	FGD2	Q7Z6J4	655 aa		10.53	□□□□□ -0.72
PTPN7-204	ENST00000462815	ANKRD37	Q7Z713	158 aa		10.53	□□□□□ -0.72
PTPN7-204	ENST00000462815	CRLF3	Q8IUI8	442 aa		10.53	□□□□□ -0.72
PTPN7-204	ENST00000462815	TM4SF19	Q96DZ7	209 aa		10.53	□□□□□ -0.72
PTPN7-204	ENST00000462815	BAG1	Q99933	345 aa	Predicted RBP	10.53	□□□□□ -0.72
PTPN7-204	ENST00000462815	YIPF2	Q9BWQ6	316 aa		10.53	□□□□□ -0.72
PTPN7-204	ENST00000462815	FAM114A2	Q9NRY5	505 aa		10.53	□□□□□ -0.72
PTPN7-204	ENST00000462815	LANCL2	Q9NS86	450 aa		10.53	□□□□□ -0.72
PTPN7-204	ENST00000462815	KLHL42	Q9P2K6	505 aa		10.53	□□□□□ -0.72
PTPN7-204	ENST00000462815	SH3BGRL2	Q9UJC5	107 aa		10.53	□□□□□ -0.72
PTPN7-204	ENST00000462815	DRG1	Q9Y295	367 aa	Known RBP	10.53	□□□□□ -0.72
PTPN7-204	ENST00000462815	DNHD1	Q96M86	4753 aa		10.53	□□□□□ -0.72
PTPN7-204	ENST00000462815	SCN2A	Q99250	2005 aa		10.52	□□□□□ -0.73
PTPN7-204	ENST00000462815		H7BY64	318 aa		10.52	□□□□□ -0.73
PTPN7-204	ENST00000462815	SMAP	O00193	183 aa		10.52	□□□□□ -0.73
PTPN7-204	ENST00000462815	TXNDC9	O14530	226 aa		10.52	□□□□□ -0.73
PTPN7-204	ENST00000462815	AVIL	O75366	819 aa		10.52	□□□□□ -0.73
PTPN7-204	ENST00000462815	CCNDBP1	O95273	360 aa		10.52	□□□□□ -0.73
PTPN7-204	ENST00000462815	CAT	P04040	527 aa	Known RBP	10.52	□□□□□ -0.73
PTPN7-204	ENST00000462815	COX6B1	P14854	86 aa		10.52	□□□□□ -0.73
PTPN7-204	ENST00000462815	CHRM3	P20309	590 aa		10.52	□□□□□ -0.73
PTPN7-204	ENST00000462815	CD96	P40200	585 aa		10.52	□□□□□ -0.73
PTPN7-204	ENST00000462815	BCL6	P41182	706 aa		10.52	□□□□□ -0.73
PTPN7-204	ENST00000462815	MAGEA6	P43360	314 aa		10.52	□□□□□ -0.73
PTPN7-204	ENST00000462815	AP2B1	P63010	937 aa		10.52	□□□□□ -0.73
PTPN7-204	ENST00000462815	BASP1	P80723	227 aa	Known RBP	10.52	□□□□□ -0.73
PTPN7-204	ENST00000462815	TIAL1	Q01085	375 aa	Known RBP eCLIP	10.52	□□□□□ -0.73
PTPN7-204	ENST00000462815	RHAG	Q02094	409 aa		10.52	□□□□□ -0.73
PTPN7-204	ENST00000462815	CUL1	Q13616	776 aa		10.52	□□□□□ -0.73
PTPN7-204	ENST00000462815	PTK6	Q13882	451 aa		10.52	□□□□□ -0.73
PTPN7-204	ENST00000462815	RPS6KA1	Q15418	735 aa		10.52	□□□□□ -0.73
PTPN7-204	ENST00000462815	MEI1	Q5TIA1	1274 aa		10.52	□□□□□ -0.73
PTPN7-204	ENST00000462815	CAND1	Q86VP6	1230 aa	Known RBP	10.52	□□□□□ -0.73
PTPN7-204	ENST00000462815	ZNF227	Q86WZ6	799 aa		10.52	□□□□□ -0.73
PTPN7-204	ENST00000462815	AGGF1	Q8N302	714 aa	eCLIP	10.52	□□□□□ -0.73
PTPN7-204	ENST00000462815	RNF10	Q8N5U6	811 aa	Known RBP	10.52	□□□□□ -0.73
PTPN7-204	ENST00000462815	CCDC89	Q8N998	374 aa		10.52	□□□□□ -0.73
PTPN7-204	ENST00000462815	OR51Q1	Q8NH59	317 aa		10.52	□□□□□ -0.73
PTPN7-204	ENST00000462815	CD200R1	Q8TD46	325 aa		10.52	□□□□□ -0.73
PTPN7-204	ENST00000462815	RERG	Q96A58	199 aa	Predicted RBP	10.52	□□□□□ -0.73
PTPN7-204	ENST00000462815	PRAP1	Q96NZ9	151 aa		10.52	□□□□□ -0.73
PTPN7-204	ENST00000462815	MACROD1	Q9BQ69	325 aa		10.52	□□□□□ -0.73
PTPN7-204	ENST00000462815	TRIM51	Q9BSJ1	452 aa		10.52	□□□□□ -0.73
PTPN7-204	ENST00000462815	MMP25	Q9NPA2	562 aa		10.52	□□□□□ -0.73
PTPN7-204	ENST00000462815	INTS10	Q9NVR2	710 aa	Known RBP	10.52	□□□□□ -0.73
PTPN7-204	ENST00000462815	BFAR	Q9NZS9	450 aa		10.52	□□□□□ -0.73
PTPN7-204	ENST00000462815	MEMO1	Q9Y316	297 aa		10.52	□□□□□ -0.73
PTPN7-204	ENST00000462815	VPS13C	Q709C8	3753 aa		10.52	□□□□□ -0.73
PTPN7-204	ENST00000462815	MTOR	P42345	2549 aa		10.51	□□□□□ -0.73
PTPN7-204	ENST00000462815	ZCWPW2	A0A1B0GU75	182 aa		10.51	□□□□□ -0.73
PTPN7-204	ENST00000462815	AP3B1	O00203	1094 aa		10.51	□□□□□ -0.73
PTPN7-204	ENST00000462815	ZNHIT1	O43257	154 aa		10.51	□□□□□ -0.73
PTPN7-204	ENST00000462815	KIF5C	O60282	957 aa		10.51	□□□□□ -0.73
PTPN7-204	ENST00000462815	MPC1L	P0DKB6	136 aa		10.51	□□□□□ -0.73
PTPN7-204	ENST00000462815	IL1RN	P18510	177 aa		10.51	□□□□□ -0.73
PTPN7-204	ENST00000462815	XCR1	P46094	333 aa		10.51	□□□□□ -0.73
PTPN7-204	ENST00000462815	KCNJ1	P48048	391 aa		10.51	□□□□□ -0.73
PTPN7-204	ENST00000462815	TBPL1	P62380	186 aa		10.51	□□□□□ -0.73
PTPN7-204	ENST00000462815	CSNK1G2	P78368	415 aa		10.51	□□□□□ -0.73
PTPN7-204	ENST00000462815	CDK16	Q00536	496 aa		10.51	□□□□□ -0.73
PTPN7-204	ENST00000462815	RBPJ	Q06330	500 aa		10.51	□□□□□ -0.73
PTPN7-204	ENST00000462815	OR1C1	Q15619	314 aa		10.51	□□□□□ -0.73
PTPN7-204	ENST00000462815	LONRF1	Q17RB8	773 aa		10.51	□□□□□ -0.73
PTPN7-204	ENST00000462815	BTBD16	Q32M84	506 aa		10.51	□□□□□ -0.73
PTPN7-204	ENST00000462815	RNFT1	Q5M7Z0	435 aa		10.51	□□□□□ -0.73
PTPN7-204	ENST00000462815	ZNF468	Q5VIY5	522 aa	Predicted RBP	10.51	□□□□□ -0.73
PTPN7-204	ENST00000462815	ANKRD22	Q5VYY1	191 aa		10.51	□□□□□ -0.73
PTPN7-204	ENST00000462815	ARMC3	Q5W041	872 aa		10.51	□□□□□ -0.73
PTPN7-204	ENST00000462815	SPINK14	Q6IE38	97 aa		10.51	□□□□□ -0.73
PTPN7-204	ENST00000462815	NEPRO	Q6NW34	567 aa		10.51	□□□□□ -0.73
PTPN7-204	ENST00000462815	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	10.51	□□□□□ -0.73
PTPN7-204	ENST00000462815	SPPL2C	Q8IUH8	684 aa		10.51	□□□□□ -0.73
PTPN7-204	ENST00000462815	DENND6A	Q8IWF6	608 aa		10.51	□□□□□ -0.73
PTPN7-204	ENST00000462815	AFAP1L2	Q8N4X5	818 aa		10.51	□□□□□ -0.73
PTPN7-204	ENST00000462815	PRELID2	Q8N945	189 aa		10.51	□□□□□ -0.73
PTPN7-204	ENST00000462815	SUN3	Q8TAQ9	357 aa		10.51	□□□□□ -0.73
PTPN7-204	ENST00000462815	M1AP	Q8TC57	530 aa		10.51	□□□□□ -0.73
PTPN7-204	ENST00000462815	KCNJ9	Q92806	393 aa		10.51	□□□□□ -0.73
PTPN7-204	ENST00000462815	C14orf79	Q96F83	325 aa		10.51	□□□□□ -0.73
PTPN7-204	ENST00000462815	ZNF354B	Q96LW1	612 aa		10.51	□□□□□ -0.73
PTPN7-204	ENST00000462815	DMRTA2	Q96SC8	542 aa		10.51	□□□□□ -0.73
PTPN7-204	ENST00000462815	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	10.51	□□□□□ -0.73

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