RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 CAPN13Q6MZZ7 669 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC3-205ENST00000462715 ZNF852Q6ZMS4 543 aa11.13□□□□□ -0.63
TRAPPC3-205ENST00000462715 CCDC117Q8IWD4 279 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC3-205ENST00000462715 ZNF557Q8N988 423 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC3-205ENST00000462715 OR7D4Q8NG98 312 aa11.13□□□□□ -0.63
TRAPPC3-205ENST00000462715 UCK2Q9BZX2 261 aa11.13□□□□□ -0.63
TRAPPC3-205ENST00000462715 GABARAPL1Q9H0R8 117 aa11.13□□□□□ -0.63
TRAPPC3-205ENST00000462715 FAM83DQ9H4H8 585 aa11.13□□□□□ -0.63
TRAPPC3-205ENST00000462715 GORASP2Q9H8Y8 452 aa11.13□□□□□ -0.63
TRAPPC3-205ENST00000462715 DYRK4Q9NR20 520 aa11.13□□□□□ -0.63
TRAPPC3-205ENST00000462715 PTTG3PQ9NZH4 202 aa11.13□□□□□ -0.63
TRAPPC3-205ENST00000462715 RCOR3Q9P2K3 495 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC3-205ENST00000462715 GMPR2Q9P2T1 348 aaKnown RBP11.13□□□□□ -0.63
TRAPPC3-205ENST00000462715 DIMT1Q9UNQ2 313 aaKnown RBP11.13□□□□□ -0.63
TRAPPC3-205ENST00000462715 RNF6Q9Y252 685 aa11.13□□□□□ -0.63
TRAPPC3-205ENST00000462715 MRPS17Q9Y2R5 130 aaKnown RBP11.13□□□□□ -0.63
TRAPPC3-205ENST00000462715 HS3ST4Q9Y661 456 aa11.13□□□□□ -0.63
TRAPPC3-205ENST00000462715 CCDC182A6NF36 153 aa11.12□□□□□ -0.63
TRAPPC3-205ENST00000462715 STX16O14662 325 aa11.12□□□□□ -0.63
TRAPPC3-205ENST00000462715 TSPAN3O60637 253 aa11.12□□□□□ -0.63
TRAPPC3-205ENST00000462715 ATG13O75143 517 aa11.12□□□□□ -0.63
TRAPPC3-205ENST00000462715 SLC22A5O76082 557 aa11.12□□□□□ -0.63
TRAPPC3-205ENST00000462715 FGF4P08620 206 aa11.12□□□□□ -0.63
TRAPPC3-205ENST00000462715 CAPN3P20807 821 aa11.12□□□□□ -0.63
TRAPPC3-205ENST00000462715 CD72P21854 359 aa11.12□□□□□ -0.63
TRAPPC3-205ENST00000462715 SLC6A4P31645 630 aa11.12□□□□□ -0.63
TRAPPC3-205ENST00000462715 RFX2P48378 723 aa11.12□□□□□ -0.63
TRAPPC3-205ENST00000462715 RAB10P61026 200 aa11.12□□□□□ -0.63
TRAPPC3-205ENST00000462715 TEKQ02763 1124 aa11.12□□□□□ -0.63
TRAPPC3-205ENST00000462715 PIGFQ07326 219 aa11.12□□□□□ -0.63
TRAPPC3-205ENST00000462715 SCRN3Q0VDG4 424 aa11.12□□□□□ -0.63
TRAPPC3-205ENST00000462715 USP10Q14694 798 aaKnown RBP11.12□□□□□ -0.63
TRAPPC3-205ENST00000462715 TAB1Q15750 504 aa11.12□□□□□ -0.63
TRAPPC3-205ENST00000462715 DPYSL2Q16555 572 aa11.12□□□□□ -0.63
TRAPPC3-205ENST00000462715 RAB6CQ53S08 254 aa11.12□□□□□ -0.63
TRAPPC3-205ENST00000462715 GLYATQ6IB77 296 aa11.12□□□□□ -0.63
TRAPPC3-205ENST00000462715 PLEKHM3Q6ZWE6 761 aa11.12□□□□□ -0.63
TRAPPC3-205ENST00000462715 SPATA19Q7Z5L4 167 aa11.12□□□□□ -0.63
TRAPPC3-205ENST00000462715 PSTKQ8IV42 348 aaKnown RBP11.12□□□□□ -0.63
TRAPPC3-205ENST00000462715 CENPLQ8N0S6 344 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC3-205ENST00000462715 EID3Q8N140 333 aa11.12□□□□□ -0.63
TRAPPC3-205ENST00000462715 OR4M1Q8NGD0 313 aa11.12□□□□□ -0.63
TRAPPC3-205ENST00000462715 ZNF669Q96BR6 464 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC3-205ENST00000462715 HYLS1Q96M11 299 aa11.12□□□□□ -0.63
TRAPPC3-205ENST00000462715 WDFY2Q96P53 400 aa11.12□□□□□ -0.63
TRAPPC3-205ENST00000462715 RAB6CQ9H0N0 254 aa11.12□□□□□ -0.63
TRAPPC3-205ENST00000462715 OSBPL2Q9H1P3 480 aa11.12□□□□□ -0.63
TRAPPC3-205ENST00000462715 MAGIXQ9H6Y5 334 aa11.12□□□□□ -0.63
TRAPPC3-205ENST00000462715 ING3Q9NXR8 418 aa11.12□□□□□ -0.63
TRAPPC3-205ENST00000462715 LEF1Q9UJU2 399 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC3-205ENST00000462715 TRHDEQ9UKU6 1024 aa11.12□□□□□ -0.63
TRAPPC3-205ENST00000462715 ELF5Q9UKW6 265 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC3-205ENST00000462715 PCDHGB3Q9Y5G1 929 aa11.12□□□□□ -0.63
TRAPPC3-205ENST00000462715 KLK4Q9Y5K2 254 aa11.12□□□□□ -0.63
TRAPPC3-205ENST00000462715 A0A1B0GVM2 712 aa11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 OR6C70A6NIJ9 312 aa11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 FAM170BA6NMN3 283 aa11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 TMEM233B4DJY2 109 aa11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 GFRA2O00451 464 aa11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 CACNG3O60359 315 aa11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 MT-ND2P03891 347 aa11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 MTHFD1P11586 935 aaKnown RBP11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 HRH2P25021 359 aa11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 SOX9P48436 509 aa11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 GNA13Q14344 377 aa11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 TBCEQ15813 527 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 TMEM65Q6PI78 240 aa11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 KCNMB4Q86W47 210 aa11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 ADGRG3Q86Y34 549 aa11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 CNTN4Q8IWV2 1026 aa11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 FRMD6Q96NE9 622 aa11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 MFSD1Q9H3U5 465 aa11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 CASS4Q9NQ75 786 aa11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 SLC39A10Q9ULF5 831 aa11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 TBL1XO60907 577 aa11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 B3GALNT1O75752 331 aa11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 F8A1P23610 371 aa11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 HMGCLP35914 325 aa11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 PIGAP37287 484 aa11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 ABCG1P45844 678 aa11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 KCNC1P48547 511 aa11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 STARD6P59095 220 aa11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 NRG1Q02297 640 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 SCN1BQ07699 218 aa11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 RGS1Q08116 209 aa11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 COX10Q12887 443 aa11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 GRM3Q14832 879 aa11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 KIF19Q2TAC6 998 aa11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 TIMM50Q3ZCQ8 353 aa11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 MLIPQ5VWP3 458 aa11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 FBXL22Q6P050 247 aa11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 NUDT18Q6ZVK8 323 aa11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 SLC46A3Q7Z3Q1 461 aa11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 B3GNT8Q7Z7M8 397 aa11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 GPAT4Q86UL3 456 aa11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 FAM181AQ8N9Y4 354 aa11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 KCTD4Q8WVF5 259 aa11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 FAM3CQ92520 227 aa11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 C19orf60Q96EN9 201 aa11.11□□□□□ -0.63
TRAPPC3-205ENST00000462715 SECISBP2Q96T21 854 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms