RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 TP73O15350 636 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 ST8SIA5O15466 376 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 ALOX12BO75342 701 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 BANF1O75531 89 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 AGFG2O95081 481 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 BMP10O95393 424 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 NSA2O95478 260 aaKnown RBP8.68□□□□□ -1.02
BRCA1-207ENST00000461798 ANXA5P08758 320 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 HIST1H2AGP0C0S8 130 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-207ENST00000461798 ICAM2P13598 275 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 HIST1H2ADP20671 130 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 SOX11P35716 441 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 BCL6P41182 706 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 ELK3P41970 407 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 AVPR1BP47901 424 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 AP1S2P56377 157 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 IL2P60568 153 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 TBPL1P62380 186 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 MRPL49Q13405 166 aaKnown RBP8.68□□□□□ -1.02
BRCA1-207ENST00000461798 NAE1Q13564 534 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 TLR1Q15399 786 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 HIF1AQ16665 826 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 PHKG1Q16816 387 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 EIF2S3LQ2VIR3 472 aaKnown RBP8.68□□□□□ -1.02
BRCA1-207ENST00000461798 HECTD2Q5U5R9 776 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 DUPD1Q68J44 220 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 TMEM214Q6NUQ4 689 aaKnown RBP8.68□□□□□ -1.02
BRCA1-207ENST00000461798 TRMT10BQ6PF06 316 aaKnown RBP8.68□□□□□ -1.02
BRCA1-207ENST00000461798 RIPOR1Q6ZS17 1223 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 ADCK2Q7Z695 626 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 PACS2Q86VP3 889 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 C17orf64Q86WR6 236 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 ZC3H7AQ8IWR0 971 aaKnown RBP8.68□□□□□ -1.02
BRCA1-207ENST00000461798 PRSS58Q8IYP2 241 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 CAMKVQ8NCB2 501 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 OR4K1Q8NGD4 311 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 OR56A3Q8NH54 315 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 SSC4DQ8WTU2 575 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 ANKRD7Q92527 254 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 HAS2Q92819 552 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 C8orf44Q96CB5 159 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 LINGO1Q96FE5 620 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 HIST1H2AHQ96KK5 128 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 IMMP1LQ96LU5 166 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 HIST1H2AJQ99878 128 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 WDR83Q9BRX9 315 aaKnown RBP8.68□□□□□ -1.02
BRCA1-207ENST00000461798 HAUS8Q9BT25 410 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 H2AFJQ9BTM1 129 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 ZNF700Q9H0M5 742 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 EPS8L2Q9H6S3 715 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 ZNF160Q9HCG1 818 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 AGPAT4Q9NRZ5 378 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 MOCS1Q9NZB8 636 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 RNF14Q9UBS8 474 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 NOVA2Q9UNW9 492 aaKnown RBP8.68□□□□□ -1.02
BRCA1-207ENST00000461798 NTNG1Q9Y2I2 539 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 MRPS2Q9Y399 296 aaKnown RBP8.68□□□□□ -1.02
BRCA1-207ENST00000461798 CSAG2Q9Y5P2 127 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 SLC22A7Q9Y694 548 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 SAR1BQ9Y6B6 198 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 PCM1Q15154 2024 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 SPTBN1Q01082 2364 aaKnown RBP8.68□□□□□ -1.02
BRCA1-207ENST00000461798 FAM187AA6NFU0 413 aa8.67□□□□□ -1.02
BRCA1-207ENST00000461798 USP27XA6NNY8 438 aa8.67□□□□□ -1.02
BRCA1-207ENST00000461798 E7ESA3 106 aa8.67□□□□□ -1.02
BRCA1-207ENST00000461798 LCMT2O60294 686 aaKnown RBP8.67□□□□□ -1.02
BRCA1-207ENST00000461798 WFS1O76024 890 aa8.67□□□□□ -1.02
BRCA1-207ENST00000461798 SEC31AO94979 1220 aaKnown RBP8.67□□□□□ -1.02
BRCA1-207ENST00000461798 HEXBP07686 556 aa8.67□□□□□ -1.02
BRCA1-207ENST00000461798 ENO2P09104 434 aaPredicted RBP8.67□□□□□ -1.02
BRCA1-207ENST00000461798 PRR35P0CG20 571 aa8.67□□□□□ -1.02
BRCA1-207ENST00000461798 IL10P22301 178 aa8.67□□□□□ -1.02
BRCA1-207ENST00000461798 GLRBP48167 497 aa8.67□□□□□ -1.02
BRCA1-207ENST00000461798 EFNA3P52797 238 aa8.67□□□□□ -1.02
BRCA1-207ENST00000461798 GNG11P61952 73 aa8.67□□□□□ -1.02
BRCA1-207ENST00000461798 AP2B1P63010 937 aa8.67□□□□□ -1.02
BRCA1-207ENST00000461798 SNRPNP63162 240 aaKnown RBP8.67□□□□□ -1.02
BRCA1-207ENST00000461798 DR1Q01658 176 aa8.67□□□□□ -1.02
BRCA1-207ENST00000461798 ZNF169Q14929 603 aaPredicted RBP8.67□□□□□ -1.02
BRCA1-207ENST00000461798 PCOLCEQ15113 449 aa8.67□□□□□ -1.02
BRCA1-207ENST00000461798 NR6A1Q15406 480 aa8.67□□□□□ -1.02
BRCA1-207ENST00000461798 CAPN13Q6MZZ7 669 aaPredicted RBP8.67□□□□□ -1.02
BRCA1-207ENST00000461798 FAM45BPQ6NSW5 357 aa8.67□□□□□ -1.02
BRCA1-207ENST00000461798 STRA8Q7Z7C7 330 aa8.67□□□□□ -1.02
BRCA1-207ENST00000461798 ASPGQ86U10 573 aa8.67□□□□□ -1.02
BRCA1-207ENST00000461798 AFAP1L2Q8N4X5 818 aa8.67□□□□□ -1.02
BRCA1-207ENST00000461798 MFSD9Q8NBP5 474 aa8.67□□□□□ -1.02
BRCA1-207ENST00000461798 ST6GALNAC3Q8NDV1 305 aa8.67□□□□□ -1.02
BRCA1-207ENST00000461798 OR9A4Q8NGU2 314 aa8.67□□□□□ -1.02
BRCA1-207ENST00000461798 FAM45AQ8TCE6 357 aa8.67□□□□□ -1.02
BRCA1-207ENST00000461798 SLC13A3Q8WWT9 602 aa8.67□□□□□ -1.02
BRCA1-207ENST00000461798 ATL1Q8WXF7 558 aa8.67□□□□□ -1.02
BRCA1-207ENST00000461798 FBXL8Q96CD0 374 aa8.67□□□□□ -1.02
BRCA1-207ENST00000461798 SNF8Q96H20 258 aa8.67□□□□□ -1.02
BRCA1-207ENST00000461798 PDLIM2Q96JY6 352 aa8.67□□□□□ -1.02
BRCA1-207ENST00000461798 PWWP2AQ96N64 755 aa8.67□□□□□ -1.02
BRCA1-207ENST00000461798 SPENQ96T58 3664 aaKnown RBP8.67□□□□□ -1.02
BRCA1-207ENST00000461798 CYTH2Q99418 400 aa8.67□□□□□ -1.02
BRCA1-207ENST00000461798 OLFM1Q99784 485 aa8.67□□□□□ -1.02
BRCA1-207ENST00000461798 YIPF2Q9BWQ6 316 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms