RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 PSMC3IPQ9P2W1 217 aaPredicted RBP12.65□□□□□ -0.38
RAB11FIP3-207ENST00000461009 ZNF451Q9Y4E5 1061 aa12.65□□□□□ -0.38
RAB11FIP3-207ENST00000461009 PCDHGB7Q9Y5F8 929 aa12.65□□□□□ -0.38
RAB11FIP3-207ENST00000461009 PCDHGA9Q9Y5G4 932 aaKnown RBP12.65□□□□□ -0.38
RAB11FIP3-207ENST00000461009 IGKV1-8A0A0C4DH67 115 aa12.64□□□□□ -0.39
RAB11FIP3-207ENST00000461009 H0YGG7 62 aa12.64□□□□□ -0.39
RAB11FIP3-207ENST00000461009 HCRTR1O43613 425 aa12.64□□□□□ -0.39
RAB11FIP3-207ENST00000461009 KERAO60938 352 aa12.64□□□□□ -0.39
RAB11FIP3-207ENST00000461009 H2AFYO75367 372 aaKnown RBP12.64□□□□□ -0.39
RAB11FIP3-207ENST00000461009 STK16O75716 305 aa12.64□□□□□ -0.39
RAB11FIP3-207ENST00000461009 EIF2S1P05198 315 aaKnown RBP12.64□□□□□ -0.39
RAB11FIP3-207ENST00000461009 ALAS2P22557 587 aa12.64□□□□□ -0.39
RAB11FIP3-207ENST00000461009 GGT5P36269 586 aa12.64□□□□□ -0.39
RAB11FIP3-207ENST00000461009 FOLR3P41439 243 aa12.64□□□□□ -0.39
RAB11FIP3-207ENST00000461009 CCR8P51685 355 aa12.64□□□□□ -0.39
RAB11FIP3-207ENST00000461009 ARF3P61204 181 aaPredicted RBP12.64□□□□□ -0.39
RAB11FIP3-207ENST00000461009 RPS15AP62244 130 aaKnown RBP12.64□□□□□ -0.39
RAB11FIP3-207ENST00000461009 YBX1P67809 324 aaKnown RBP12.64□□□□□ -0.39
RAB11FIP3-207ENST00000461009 DLG1Q12959 904 aa12.64□□□□□ -0.39
RAB11FIP3-207ENST00000461009 SSPNQ14714 243 aa12.64□□□□□ -0.39
RAB11FIP3-207ENST00000461009 ERCC6LQ2NKX8 1250 aa12.64□□□□□ -0.39
RAB11FIP3-207ENST00000461009 TSNAXIP1Q2TAA8 658 aa12.64□□□□□ -0.39
RAB11FIP3-207ENST00000461009 WASHC2DQ5SRD0 308 aa12.64□□□□□ -0.39
RAB11FIP3-207ENST00000461009 LCN10Q6JVE6 187 aa12.64□□□□□ -0.39
RAB11FIP3-207ENST00000461009 TIFABQ6ZNK6 161 aa12.64□□□□□ -0.39
RAB11FIP3-207ENST00000461009 EFCAB3Q8N7B9 438 aa12.64□□□□□ -0.39
RAB11FIP3-207ENST00000461009 ABHD11Q8NFV4 315 aa12.64□□□□□ -0.39
RAB11FIP3-207ENST00000461009 KCTD4Q8WVF5 259 aa12.64□□□□□ -0.39
RAB11FIP3-207ENST00000461009 PTERQ96BW5 349 aa12.64□□□□□ -0.39
RAB11FIP3-207ENST00000461009 FER1L6-AS2Q96M78 137 aa12.64□□□□□ -0.39
RAB11FIP3-207ENST00000461009 ZNF285Q96NJ3 590 aa12.64□□□□□ -0.39
RAB11FIP3-207ENST00000461009 ENAMQ9NRM1 1142 aa12.64□□□□□ -0.39
RAB11FIP3-207ENST00000461009 CUEDC1Q9NWM3 386 aaPredicted RBP12.64□□□□□ -0.39
RAB11FIP3-207ENST00000461009 NUDT4Q9NZJ9 180 aa12.64□□□□□ -0.39
RAB11FIP3-207ENST00000461009 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.64□□□□□ -0.39
RAB11FIP3-207ENST00000461009 PTBP2Q9UKA9 531 aaKnown RBP12.64□□□□□ -0.39
RAB11FIP3-207ENST00000461009 SLC22A14Q9Y267 594 aa12.64□□□□□ -0.39
RAB11FIP3-207ENST00000461009 V9GYY5 206 aaPredicted RBP12.64□□□□□ -0.39
RAB11FIP3-207ENST00000461009 SPTA1P02549 2419 aa12.64□□□□□ -0.39
RAB11FIP3-207ENST00000461009 LOC105369274A0A096LPK9 316 aa12.63□□□□□ -0.39
RAB11FIP3-207ENST00000461009 LOC102723532A0A0G2JNH3 316 aa12.63□□□□□ -0.39
RAB11FIP3-207ENST00000461009 HYKKA2RU49 373 aa12.63□□□□□ -0.39
RAB11FIP3-207ENST00000461009 SUPT3HB4E1H0 165 aa12.63□□□□□ -0.39
RAB11FIP3-207ENST00000461009 H3BMH7 237 aa12.63□□□□□ -0.39
RAB11FIP3-207ENST00000461009 DPM1O60762 260 aa12.63□□□□□ -0.39
RAB11FIP3-207ENST00000461009 SUPT3HO75486 399 aa12.63□□□□□ -0.39
RAB11FIP3-207ENST00000461009 DNAJB5O75953 348 aa12.63□□□□□ -0.39
RAB11FIP3-207ENST00000461009 WDR47O94967 919 aa12.63□□□□□ -0.39
RAB11FIP3-207ENST00000461009 CDH1P12830 882 aa12.63□□□□□ -0.39
RAB11FIP3-207ENST00000461009 GNAZP19086 355 aa12.63□□□□□ -0.39
RAB11FIP3-207ENST00000461009 CXCR2P25025 360 aa12.63□□□□□ -0.39
RAB11FIP3-207ENST00000461009 OTX2P32243 289 aa12.63□□□□□ -0.39
RAB11FIP3-207ENST00000461009 MAGEA12P43365 314 aa12.63□□□□□ -0.39
RAB11FIP3-207ENST00000461009 EMP3P54852 163 aa12.63□□□□□ -0.39
RAB11FIP3-207ENST00000461009 CSNK1G2P78368 415 aa12.63□□□□□ -0.39
RAB11FIP3-207ENST00000461009 FOXK1P85037 733 aa12.63□□□□□ -0.39
RAB11FIP3-207ENST00000461009 IRF9Q00978 393 aa12.63□□□□□ -0.39
RAB11FIP3-207ENST00000461009 C1orf189Q5VU69 101 aa12.63□□□□□ -0.39
RAB11FIP3-207ENST00000461009 FRMPD2BQ6IN97 320 aa12.63□□□□□ -0.39
RAB11FIP3-207ENST00000461009 FAM198BQ6UWH4 519 aa12.63□□□□□ -0.39
RAB11FIP3-207ENST00000461009 KLHDC8AQ8IYD2 350 aa12.63□□□□□ -0.39
RAB11FIP3-207ENST00000461009 CENPLQ8N0S6 344 aaPredicted RBP12.63□□□□□ -0.39
RAB11FIP3-207ENST00000461009 OR4N4Q8N0Y3 316 aa12.63□□□□□ -0.39
RAB11FIP3-207ENST00000461009 PDPRQ8NCN5 879 aa12.63□□□□□ -0.39
RAB11FIP3-207ENST00000461009 ADAMTS17Q8TE56 1095 aa12.63□□□□□ -0.39
RAB11FIP3-207ENST00000461009 SLC5A11Q8WWX8 675 aa12.63□□□□□ -0.39
RAB11FIP3-207ENST00000461009 EXT2Q93063 718 aa12.63□□□□□ -0.39
RAB11FIP3-207ENST00000461009 VPS50Q96JG6 964 aa12.63□□□□□ -0.39
RAB11FIP3-207ENST00000461009 SCYL1Q96KG9 808 aa12.63□□□□□ -0.39
RAB11FIP3-207ENST00000461009 PARD6BQ9BYG5 372 aa12.63□□□□□ -0.39
RAB11FIP3-207ENST00000461009 TRIM55Q9BYV6 548 aa12.63□□□□□ -0.39
RAB11FIP3-207ENST00000461009 EPB41L4BQ9H329 900 aa12.63□□□□□ -0.39
RAB11FIP3-207ENST00000461009 CUTCQ9NTM9 273 aa12.63□□□□□ -0.39
RAB11FIP3-207ENST00000461009 DNAJC11Q9NVH1 559 aa12.63□□□□□ -0.39
RAB11FIP3-207ENST00000461009 TMCO1Q9UM00 188 aa12.63□□□□□ -0.39
RAB11FIP3-207ENST00000461009 PTRH2Q9Y3E5 179 aaKnown RBP12.63□□□□□ -0.39
RAB11FIP3-207ENST00000461009 BOD1L1Q8NFC6 3051 aa12.63□□□□□ -0.39
RAB11FIP3-207ENST00000461009 KCNE1BA0A087WTH5 132 aa12.62□□□□□ -0.39
RAB11FIP3-207ENST00000461009 FITM1A5D6W6 292 aa12.62□□□□□ -0.39
RAB11FIP3-207ENST00000461009 TTLL8A6PVC2 850 aa12.62□□□□□ -0.39
RAB11FIP3-207ENST00000461009 MAP2K7O14733 419 aa12.62□□□□□ -0.39
RAB11FIP3-207ENST00000461009 HAT1O14929 419 aa12.62□□□□□ -0.39
RAB11FIP3-207ENST00000461009 CLGNO14967 610 aa12.62□□□□□ -0.39
RAB11FIP3-207ENST00000461009 DSCR3O14972 297 aa12.62□□□□□ -0.39
RAB11FIP3-207ENST00000461009 CAPN1P07384 714 aa12.62□□□□□ -0.39
RAB11FIP3-207ENST00000461009 NR1D1P20393 614 aa12.62□□□□□ -0.39
RAB11FIP3-207ENST00000461009 GCAP28676 217 aa12.62□□□□□ -0.39
RAB11FIP3-207ENST00000461009 HSD17B3P37058 310 aa12.62□□□□□ -0.39
RAB11FIP3-207ENST00000461009 SLC6A12P48065 614 aa12.62□□□□□ -0.39
RAB11FIP3-207ENST00000461009 GLRBP48167 497 aa12.62□□□□□ -0.39
RAB11FIP3-207ENST00000461009 KCNC1P48547 511 aa12.62□□□□□ -0.39
RAB11FIP3-207ENST00000461009 CDC16Q13042 620 aa12.62□□□□□ -0.39
RAB11FIP3-207ENST00000461009 CHAF1BQ13112 559 aa12.62□□□□□ -0.39
RAB11FIP3-207ENST00000461009 NDUFA9Q16795 377 aa12.62□□□□□ -0.39
RAB11FIP3-207ENST00000461009 ZXDCQ2QGD7 858 aaPredicted RBP12.62□□□□□ -0.39
RAB11FIP3-207ENST00000461009 MUM1Q2TAK8 710 aa12.62□□□□□ -0.39
RAB11FIP3-207ENST00000461009 NKAIN1Q4KMZ8 207 aa12.62□□□□□ -0.39
RAB11FIP3-207ENST00000461009 GARNL3Q5VVW2 1013 aa12.62□□□□□ -0.39
RAB11FIP3-207ENST00000461009 CPZQ66K79 652 aa12.62□□□□□ -0.39
RAB11FIP3-207ENST00000461009 NXPE4Q6UWF7 544 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms