RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 SYT12Q8IV01 421 aa16.14■□□□□ 0.17
NELFCD-201ENST00000460601 C11orf24Q96F05 449 aaPredicted RBP16.14■□□□□ 0.17
NELFCD-201ENST00000460601 TUBB6Q9BUF5 446 aa16.14■□□□□ 0.17
NELFCD-201ENST00000460601 CADM1Q9BY67 442 aaKnown RBP16.14■□□□□ 0.17
NELFCD-201ENST00000460601 SMOC1Q9H4F8 434 aa16.14■□□□□ 0.17
NELFCD-201ENST00000460601 SERTM1A2A2V5 107 aa16.13■□□□□ 0.17
NELFCD-201ENST00000460601 SLC22A3O75751 556 aa16.13■□□□□ 0.17
NELFCD-201ENST00000460601 DNAJC8O75937 253 aaPredicted RBP16.13■□□□□ 0.17
NELFCD-201ENST00000460601 SERPIND1P05546 499 aa16.13■□□□□ 0.17
NELFCD-201ENST00000460601 PRPH2P23942 346 aa16.13■□□□□ 0.17
NELFCD-201ENST00000460601 CMPK1P30085 196 aa16.13■□□□□ 0.17
NELFCD-201ENST00000460601 FASLGP48023 281 aa16.13■□□□□ 0.17
NELFCD-201ENST00000460601 RAE1P78406 368 aaKnown RBP16.13■□□□□ 0.17
NELFCD-201ENST00000460601 SIM2Q14190 667 aaPredicted RBP16.13■□□□□ 0.17
NELFCD-201ENST00000460601 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.13■□□□□ 0.17
NELFCD-201ENST00000460601 NOXRED1Q6NXP6 359 aa16.13■□□□□ 0.17
NELFCD-201ENST00000460601 ZC3H10Q96K80 434 aaKnown RBP16.13■□□□□ 0.17
NELFCD-201ENST00000460601 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.13■□□□□ 0.171e-12■■□□□ 13.6
NELFCD-201ENST00000460601 EIF3LQ9Y262 564 aaKnown RBP16.13■□□□□ 0.17
NELFCD-201ENST00000460601 ARID1BQ8NFD5 2236 aaPredicted RBP16.13■□□□□ 0.17
NELFCD-201ENST00000460601 ANKDD1BA6NHY2 528 aa16.13■□□□□ 0.17
NELFCD-201ENST00000460601 FOXE1O00358 373 aaPredicted RBP16.13■□□□□ 0.17
NELFCD-201ENST00000460601 LRATO95237 230 aa16.13■□□□□ 0.17
NELFCD-201ENST00000460601 SNRPB2P08579 225 aaKnown RBP16.13■□□□□ 0.17
NELFCD-201ENST00000460601 PRDX6P30041 224 aa16.13■□□□□ 0.17
NELFCD-201ENST00000460601 ACADVLP49748 655 aa16.13■□□□□ 0.17
NELFCD-201ENST00000460601 ACSM2AQ08AH3 577 aa16.13■□□□□ 0.17
NELFCD-201ENST00000460601 PDCD4Q53EL6 469 aaKnown RBP16.13■□□□□ 0.17
NELFCD-201ENST00000460601 ACSM2BQ68CK6 577 aa16.13■□□□□ 0.17
NELFCD-201ENST00000460601 PACS2Q86VP3 889 aa16.13■□□□□ 0.17
NELFCD-201ENST00000460601 RETREG3Q86VR2 466 aa16.13■□□□□ 0.17
NELFCD-201ENST00000460601 EFCAB3Q8N7B9 438 aa16.13■□□□□ 0.17
NELFCD-201ENST00000460601 ZBTB44Q8NCP5 570 aa16.13■□□□□ 0.17
NELFCD-201ENST00000460601 CLPTM1LQ96KA5 538 aa16.13■□□□□ 0.17
NELFCD-201ENST00000460601 TWSG1Q9GZX9 223 aa16.13■□□□□ 0.17
NELFCD-201ENST00000460601 ERVMER34-1Q9H9K5 563 aa16.13■□□□□ 0.17
NELFCD-201ENST00000460601 SLC52A3Q9NQ40 469 aa16.13■□□□□ 0.17
NELFCD-201ENST00000460601 ZSCAN32Q9NX65 697 aa16.13■□□□□ 0.17
NELFCD-201ENST00000460601 MDC1Q14676 2089 aaKnown RBP16.12■□□□□ 0.17
NELFCD-201ENST00000460601 ASPDHA6ND91 283 aa16.12■□□□□ 0.17
NELFCD-201ENST00000460601 RTCAO00442 366 aaKnown RBP16.12■□□□□ 0.17
NELFCD-201ENST00000460601 ITGAXP20702 1163 aa16.12■□□□□ 0.17
NELFCD-201ENST00000460601 RASSF2P50749 326 aa16.12■□□□□ 0.17
NELFCD-201ENST00000460601 RCAN2Q14206 197 aa16.12■□□□□ 0.17
NELFCD-201ENST00000460601 KIR2DS3Q14952 304 aa16.12■□□□□ 0.17
NELFCD-201ENST00000460601 HLA-BQ31612 363 aa16.12■□□□□ 0.17
NELFCD-201ENST00000460601 TIGD2Q4W5G0 525 aa16.12■□□□□ 0.17
NELFCD-201ENST00000460601 CACHD1Q5VU97 1274 aa16.12■□□□□ 0.17
NELFCD-201ENST00000460601 REP15Q6BDI9 236 aa16.12■□□□□ 0.17
NELFCD-201ENST00000460601 ZNF425Q6IV72 752 aa16.12■□□□□ 0.17
NELFCD-201ENST00000460601 BLOC1S3Q6QNY0 202 aa16.12■□□□□ 0.17
NELFCD-201ENST00000460601 DGLUCYQ7Z3D6 616 aa16.12■□□□□ 0.17
NELFCD-201ENST00000460601 C11orf74Q86VG3 221 aa16.12■□□□□ 0.17
NELFCD-201ENST00000460601 CDC26Q8NHZ8 85 aa16.12■□□□□ 0.17
NELFCD-201ENST00000460601 ZFPM2Q8WW38 1151 aa16.12■□□□□ 0.17
NELFCD-201ENST00000460601 F2RL3Q96RI0 385 aa16.12■□□□□ 0.17
NELFCD-201ENST00000460601 SLC39A3Q9BRY0 314 aa16.12■□□□□ 0.17
NELFCD-201ENST00000460601 C11orf16Q9NQ32 467 aa16.12■□□□□ 0.17
NELFCD-201ENST00000460601 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.12■□□□□ 0.17
NELFCD-201ENST00000460601 GPR179Q6PRD1 2367 aa16.12■□□□□ 0.17
NELFCD-201ENST00000460601 OR5K3A6NET4 321 aa16.12■□□□□ 0.17
NELFCD-201ENST00000460601 NPIPB8E9PQR5 432 aa16.12■□□□□ 0.17
NELFCD-201ENST00000460601 HSD3B1P14060 373 aa16.12■□□□□ 0.17
NELFCD-201ENST00000460601 HSD3B2P26439 372 aa16.12■□□□□ 0.17
NELFCD-201ENST00000460601 HNRNPH1P31943 449 aaKnown RBP16.12■□□□□ 0.17
NELFCD-201ENST00000460601 PIK3CBP42338 1070 aa16.12■□□□□ 0.17
NELFCD-201ENST00000460601 ARRB1P49407 418 aaPredicted RBP16.12■□□□□ 0.17
NELFCD-201ENST00000460601 DGKQP52824 942 aa16.12■□□□□ 0.17
NELFCD-201ENST00000460601 ABATP80404 500 aa16.12■□□□□ 0.17
NELFCD-201ENST00000460601 ZNF33BQ06732 778 aa16.12■□□□□ 0.17
NELFCD-201ENST00000460601 MAD2L1Q13257 205 aaPredicted RBP16.12■□□□□ 0.17
NELFCD-201ENST00000460601 BIRC2Q13490 618 aa16.12■□□□□ 0.17
NELFCD-201ENST00000460601 HERC3Q15034 1050 aa16.12■□□□□ 0.17
NELFCD-201ENST00000460601 SPESP1Q6UW49 350 aa16.12■□□□□ 0.17
NELFCD-201ENST00000460601 C17orf82Q86X59 251 aaPredicted RBP16.12■□□□□ 0.17
NELFCD-201ENST00000460601 WDR48Q8TAF3 677 aa16.12■□□□□ 0.17
NELFCD-201ENST00000460601 CHTF18Q8WVB6 975 aa16.12■□□□□ 0.17
NELFCD-201ENST00000460601 UBE2E3Q969T4 207 aa16.12■□□□□ 0.17
NELFCD-201ENST00000460601 SLC22A18Q96BI1 424 aa16.12■□□□□ 0.17
NELFCD-201ENST00000460601 RTKNQ9BST9 563 aa16.12■□□□□ 0.17
NELFCD-201ENST00000460601 AICDAQ9GZX7 198 aa16.12■□□□□ 0.17
NELFCD-201ENST00000460601 RHBGQ9H310 441 aa16.12■□□□□ 0.17
NELFCD-201ENST00000460601 TMEM184CQ9NVA4 438 aa16.12■□□□□ 0.17
NELFCD-201ENST00000460601 PACSIN3Q9UKS6 424 aa16.12■□□□□ 0.17
NELFCD-201ENST00000460601 A0A0G2JN53 185 aa16.11■□□□□ 0.17
NELFCD-201ENST00000460601 ARHGAP10A1A4S6 786 aa16.11■□□□□ 0.17
NELFCD-201ENST00000460601 GSC2O15499 205 aa16.11■□□□□ 0.17
NELFCD-201ENST00000460601 SH3BP5O60239 455 aa16.11■□□□□ 0.17
NELFCD-201ENST00000460601 CTSVO60911 334 aa16.11■□□□□ 0.17
NELFCD-201ENST00000460601 SORBS2O94875 1100 aaKnown RBP16.11■□□□□ 0.17
NELFCD-201ENST00000460601 UBXN7O94888 489 aa16.11■□□□□ 0.17
NELFCD-201ENST00000460601 B3GALT4O96024 378 aa16.11■□□□□ 0.17
NELFCD-201ENST00000460601 NQO1P15559 274 aaKnown RBP16.11■□□□□ 0.17
NELFCD-201ENST00000460601 CXCR2P25025 360 aa16.11■□□□□ 0.17
NELFCD-201ENST00000460601 POLR2JP52435 117 aaKnown RBP16.11■□□□□ 0.17
NELFCD-201ENST00000460601 SNRPNP63162 240 aaKnown RBP16.11■□□□□ 0.17
NELFCD-201ENST00000460601 MMEL1Q495T6 779 aa16.11■□□□□ 0.17
NELFCD-201ENST00000460601 C14orf28Q4W4Y0 310 aa16.11■□□□□ 0.17
NELFCD-201ENST00000460601 C6orf132Q5T0Z8 1188 aa16.11■□□□□ 0.17
NELFCD-201ENST00000460601 NKAIN2Q5VXU1 208 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms