RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 LAPTM5Q13571 262 aa21.47■■□□□ 1.03
C9orf3-209ENST00000460573 GRM7Q14831 915 aa21.47■■□□□ 1.03
C9orf3-209ENST00000460573 TBCCQ15814 346 aa21.47■■□□□ 1.03
C9orf3-209ENST00000460573 FAM214AQ32MH5 1076 aa21.47■■□□□ 1.03
C9orf3-209ENST00000460573 WASHC2DQ5SRD0 308 aa21.47■■□□□ 1.03
C9orf3-209ENST00000460573 FRMPD2BQ6IN97 320 aa21.47■■□□□ 1.03
C9orf3-209ENST00000460573 CCDC81Q6ZN84 652 aa21.47■■□□□ 1.03
C9orf3-209ENST00000460573 ZNF655Q8N720 491 aaPredicted RBP21.47■■□□□ 1.03
C9orf3-209ENST00000460573 TTC29Q8NA56 475 aaPredicted RBP21.47■■□□□ 1.03
C9orf3-209ENST00000460573 WDR34Q96EX3 536 aa21.47■■□□□ 1.03
C9orf3-209ENST00000460573 LRFN5Q96NI6 719 aa21.47■■□□□ 1.03
C9orf3-209ENST00000460573 EFCAB11Q9BUY7 163 aa21.47■■□□□ 1.03
C9orf3-209ENST00000460573 NLNQ9BYT8 704 aa21.47■■□□□ 1.03
C9orf3-209ENST00000460573 SLC7A5P2Q9GIP4 190 aa21.47■■□□□ 1.03
C9orf3-209ENST00000460573 NT5DC2Q9H857 520 aa21.47■■□□□ 1.03
C9orf3-209ENST00000460573 VIPAS39Q9H9C1 493 aa21.47■■□□□ 1.03
C9orf3-209ENST00000460573 LOC105369274A0A096LPK9 316 aa21.46■■□□□ 1.03
C9orf3-209ENST00000460573 LOC102723532A0A0G2JNH3 316 aa21.46■■□□□ 1.03
C9orf3-209ENST00000460573 E2F3O00716 465 aa21.46■■□□□ 1.03
C9orf3-209ENST00000460573 ZNF749O43361 778 aa21.46■■□□□ 1.03
C9orf3-209ENST00000460573 SIX3O95343 332 aaPredicted RBP21.46■■□□□ 1.03
C9orf3-209ENST00000460573 TIAF1O95411 115 aa21.46■■□□□ 1.03
C9orf3-209ENST00000460573 MYL2P10916 166 aa21.46■■□□□ 1.03
C9orf3-209ENST00000460573 LIPCP11150 499 aa21.46■■□□□ 1.03
C9orf3-209ENST00000460573 GSTM2P28161 218 aa21.46■■□□□ 1.03
C9orf3-209ENST00000460573 EMP3P54852 163 aa21.46■■□□□ 1.03
C9orf3-209ENST00000460573 NAA20P61599 178 aa21.46■■□□□ 1.03
C9orf3-209ENST00000460573 RHDQ02161 417 aa21.46■■□□□ 1.03
C9orf3-209ENST00000460573 IRF8Q02556 426 aa21.46■■□□□ 1.03
C9orf3-209ENST00000460573 C19orf57Q0VDD7 668 aa21.46■■□□□ 1.03
C9orf3-209ENST00000460573 GTF2H2Q13888 395 aa21.46■■□□□ 1.03
C9orf3-209ENST00000460573 E2F2Q14209 437 aa21.46■■□□□ 1.03
C9orf3-209ENST00000460573 XKR6Q5GH73 641 aa21.46■■□□□ 1.03
C9orf3-209ENST00000460573 MANEAQ5SRI9 462 aa21.46■■□□□ 1.03
C9orf3-209ENST00000460573 GTF2H2CQ6P1K8 395 aa21.46■■□□□ 1.03
C9orf3-209ENST00000460573 ZYG11AQ6WRX3 759 aa21.46■■□□□ 1.03
C9orf3-209ENST00000460573 EXOC3L1Q86VI1 746 aa21.46■■□□□ 1.03
C9orf3-209ENST00000460573 ZFAND4Q86XD8 727 aa21.46■■□□□ 1.03
C9orf3-209ENST00000460573 OR4N4Q8N0Y3 316 aa21.46■■□□□ 1.03
C9orf3-209ENST00000460573 CCDC63Q8NA47 563 aa21.46■■□□□ 1.03
C9orf3-209ENST00000460573 MFSD9Q8NBP5 474 aa21.46■■□□□ 1.03
C9orf3-209ENST00000460573 NDC1Q9BTX1 674 aa21.46■■□□□ 1.03
C9orf3-209ENST00000460573 ACTR5Q9H9F9 607 aaPredicted RBP21.46■■□□□ 1.03
C9orf3-209ENST00000460573 PCDHGA4Q9Y5G9 962 aa21.46■■□□□ 1.03
C9orf3-209ENST00000460573 HEATR5BQ9P2D3 2071 aa21.46■■□□□ 1.03
C9orf3-209ENST00000460573 ATRXP46100 2492 aa21.45■■□□□ 1.02
C9orf3-209ENST00000460573 FEZF1A0PJY2 475 aa21.45■■□□□ 1.02
C9orf3-209ENST00000460573 G3V2L1 256 aa21.45■■□□□ 1.02
C9orf3-209ENST00000460573 OR1F1O43749 312 aa21.45■■□□□ 1.02
C9orf3-209ENST00000460573 UGDHO60701 494 aa21.45■■□□□ 1.02
C9orf3-209ENST00000460573 RPS17P08708 135 aaKnown RBP21.45■■□□□ 1.02
C9orf3-209ENST00000460573 ZNF28P17035 718 aa21.45■■□□□ 1.02
C9orf3-209ENST00000460573 EPORP19235 508 aa21.45■■□□□ 1.02
C9orf3-209ENST00000460573 IMPDH1P20839 514 aa21.45■■□□□ 1.02
C9orf3-209ENST00000460573 AHRP35869 848 aa21.45■■□□□ 1.02
C9orf3-209ENST00000460573 PRKAA2P54646 552 aa21.45■■□□□ 1.02
C9orf3-209ENST00000460573 HERVK_113P63132 956 aa21.45■■□□□ 1.02
C9orf3-209ENST00000460573 MEF2AQ02078 507 aaPredicted RBP21.45■■□□□ 1.02
C9orf3-209ENST00000460573 CHIT1Q13231 466 aa21.45■■□□□ 1.02
C9orf3-209ENST00000460573 HIST2H2ACQ16777 129 aaPredicted RBP21.45■■□□□ 1.02
C9orf3-209ENST00000460573 PAGE2BQ5JRK9 111 aa21.45■■□□□ 1.02
C9orf3-209ENST00000460573 HIST2H2AA3Q6FI13 130 aa21.45■■□□□ 1.02
C9orf3-209ENST00000460573 RHBDD2Q6NTF9 364 aa21.45■■□□□ 1.02
C9orf3-209ENST00000460573 C6orf15Q6UXA7 325 aaPredicted RBP21.45■■□□□ 1.02
C9orf3-209ENST00000460573 GOLGA7Q7Z5G4 137 aa21.45■■□□□ 1.02
C9orf3-209ENST00000460573 DTX1Q86Y01 620 aa21.45■■□□□ 1.02
C9orf3-209ENST00000460573 PLD3Q8IV08 490 aa21.45■■□□□ 1.02
C9orf3-209ENST00000460573 NLGN4XQ8N0W4 816 aa21.45■■□□□ 1.02
C9orf3-209ENST00000460573 ESX1Q8N693 406 aa21.45■■□□□ 1.02
C9orf3-209ENST00000460573 NLGN4YQ8NFZ3 816 aaPredicted RBP21.45■■□□□ 1.02
C9orf3-209ENST00000460573 TTLQ8NG68 377 aa21.45■■□□□ 1.02
C9orf3-209ENST00000460573 SEC16BQ96JE7 1060 aa21.45■■□□□ 1.02
C9orf3-209ENST00000460573 ERVK-6Q9BXR3 956 aa21.45■■□□□ 1.02
C9orf3-209ENST00000460573 IPPKQ9H8X2 491 aa21.45■■□□□ 1.02
C9orf3-209ENST00000460573 GEMIN8Q9NWZ8 242 aaKnown RBP21.45■■□□□ 1.02
C9orf3-209ENST00000460573 COPG2Q9UBF2 871 aa21.45■■□□□ 1.02
C9orf3-209ENST00000460573 PCTPQ9UKL6 214 aa21.45■■□□□ 1.02
C9orf3-209ENST00000460573 LRRC14BA6NHZ5 514 aa21.44■■□□□ 1.02
C9orf3-209ENST00000460573 ERVH48-1M5A8F1 160 aa21.44■■□□□ 1.02
C9orf3-209ENST00000460573 TYROBPO43914 113 aa21.44■■□□□ 1.02
C9orf3-209ENST00000460573 LCMT2O60294 686 aaKnown RBP21.44■■□□□ 1.02
C9orf3-209ENST00000460573 SPAG7O75391 227 aa21.44■■□□□ 1.02
C9orf3-209ENST00000460573 WFS1O76024 890 aa21.44■■□□□ 1.02
C9orf3-209ENST00000460573 NTRK1P04629 796 aa21.44■■□□□ 1.02
C9orf3-209ENST00000460573 EIF2S1P05198 315 aaKnown RBP21.44■■□□□ 1.02
C9orf3-209ENST00000460573 KLK3P07288 261 aaPredicted RBP21.44■■□□□ 1.02
C9orf3-209ENST00000460573 CCNYL3P0C7X3 344 aa21.44■■□□□ 1.02
C9orf3-209ENST00000460573 CPA3P15088 417 aa21.44■■□□□ 1.02
C9orf3-209ENST00000460573 VARSP26640 1264 aaKnown RBP21.44■■□□□ 1.02
C9orf3-209ENST00000460573 BCL6P41182 706 aa21.44■■□□□ 1.02
C9orf3-209ENST00000460573 GCGRP47871 477 aa21.44■■□□□ 1.02
C9orf3-209ENST00000460573 SCTRP47872 440 aa21.44■■□□□ 1.02
C9orf3-209ENST00000460573 ATP1A2P50993 1020 aa21.44■■□□□ 1.02
C9orf3-209ENST00000460573 DOC2AQ14183 400 aa21.44■■□□□ 1.02
C9orf3-209ENST00000460573 SLBPQ14493 270 aaKnown RBP eCLIP21.44■■□□□ 1.02
C9orf3-209ENST00000460573 PRTGQ2VWP7 1150 aa21.44■■□□□ 1.02
C9orf3-209ENST00000460573 GARNL3Q5VVW2 1013 aa21.44■■□□□ 1.02
C9orf3-209ENST00000460573 LIPJQ5W064 366 aa21.44■■□□□ 1.02
C9orf3-209ENST00000460573 TMIGD1Q6UXZ0 262 aa21.44■■□□□ 1.02
C9orf3-209ENST00000460573 CSNK1A1LQ8N752 337 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms