RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 HOXD12P35452 270 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 SOAT1P35610 550 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 HNF1BP35680 557 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 CDKN2CP42773 168 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 GDF5P43026 501 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 CRATP43155 626 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 SLC6A12P48065 614 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 GSSP48637 474 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 IDH2P48735 452 aaKnown RBP3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 GZMMP51124 257 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 ACLYP53396 1101 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 CDH12P55289 794 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 TPTEP56180 551 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 SMIM11AP58511 58 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 NCS1P62166 190 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 VLDLRP98155 873 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 ZNF763Q0D2J5 394 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 HSPA14Q0VDF9 509 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 PPP1R8Q12972 351 aaKnown RBP3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 CRHR2Q13324 411 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 DNASE1L3Q13609 305 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 DDX39BQ13838 428 aaKnown RBP3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 C1DQ13901 141 aaKnown RBP3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 SCARB2Q14108 478 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 GPR162Q16538 588 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 ZNF284Q2VY69 593 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 PTCHD3Q3KNS1 767 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 CARD16Q5EG05 197 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 ARMCX4Q5H9R4 360 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 RTP2Q5QGT7 225 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 SPOUT1Q5T280 376 aaKnown RBP3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 MPP7Q5T2T1 576 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 MLIPQ5VWP3 458 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 RSBN1Q5VWQ0 802 aaPredicted RBP3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 MEDAGQ5VYS4 303 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 LRRC66Q68CR7 880 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 GRHL2Q6ISB3 625 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 SLC8B1Q6J4K2 584 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 GPR153Q6NV75 609 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 RGMBQ6NW40 437 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 ZNF544Q6NX49 715 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 MED27Q6P2C8 311 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 C22orf39Q6P5X5 142 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 PRSS55Q6UWB4 352 aaPredicted RBP3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 CASP12Q6UXS9 341 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 MBOAT1Q6ZNC8 495 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 GDPGP1Q6ZNW5 385 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 PTCHD4Q6ZW05 846 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 IKBIPQ70UQ0 350 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 CEP68Q76N32 757 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 SLC46A3Q7Z3Q1 461 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 CAMKMTQ7Z624 323 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 DNAJB7Q7Z6W7 309 aaPredicted RBP3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 VTCN1Q7Z7D3 282 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 TMEM179BQ7Z7N9 219 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 THOC6Q86W42 341 aaKnown RBP3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 LYSMD2Q8IV50 215 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 SYTL1Q8IYJ3 562 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 ENTHD1Q8IYW4 607 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 CADM3Q8N126 398 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 LGI4Q8N135 537 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 CPXM2Q8N436 756 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 CLDN19Q8N6F1 224 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 NATD1Q8N6N6 113 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 OR2AP1Q8NGE2 309 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 ZNF675Q8TD23 568 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 UTP15Q8TED0 518 aaKnown RBP3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 RASSF5Q8WWW0 418 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 ASB11Q8WXH4 323 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 LINC01599Q8WXQ3 324 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 TRIB2Q92519 343 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 SGCDQ92629 289 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 MRPS31Q92665 395 aaKnown RBP3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 UBE2E3Q969T4 207 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 TP53INP1Q96A56 240 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 TMEM159Q96B96 161 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 SH3KBP1Q96B97 665 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 PPCDCQ96CD2 204 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 MTERF3Q96E29 417 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 B3GALT6Q96L58 329 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 FCRL1Q96LA6 429 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 CASD1Q96PB1 797 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 TEFMQ96QE5 360 aaKnown RBP3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 HEPHQ9BQS7 1158 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 TSEN34Q9BSV6 310 aaKnown RBP3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 INPP5KQ9BT40 448 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 DOHHQ9BU89 302 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 EFCAB11Q9BUY7 163 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 HERC2P3Q9BVR0 1158 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 ZCCHC2Q9C0B9 1178 aaKnown RBP3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 BHLHE41Q9C0J9 482 aaPredicted RBP3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 OR2B2Q9GZK3 357 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 NUAK2Q9H093 628 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 SUV39H2Q9H5I1 410 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 ZDHHC6Q9H6R6 413 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 SGK2Q9HBY8 427 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 TMEM165Q9HC07 324 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 PCDH12Q9NPG4 1184 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 IL26Q9NPH9 171 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 SERHLQ9NQF3 203 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms