RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 MEF2AQ02078 507 aaPredicted RBP9.6□□□□□ -0.87
ATG4A-206ENST00000457035 GPS2Q13227 327 aa9.6□□□□□ -0.87
ATG4A-206ENST00000457035 E2F2Q14209 437 aa9.6□□□□□ -0.87
ATG4A-206ENST00000457035 ZNF385CQ66K41 422 aaPredicted RBP9.6□□□□□ -0.87
ATG4A-206ENST00000457035 LCN10Q6JVE6 187 aa9.6□□□□□ -0.87
ATG4A-206ENST00000457035 RHBDD2Q6NTF9 364 aa9.6□□□□□ -0.87
ATG4A-206ENST00000457035 METTL2BQ6P1Q9 378 aaKnown RBP9.6□□□□□ -0.87
ATG4A-206ENST00000457035 VN1R4Q7Z5H5 301 aa9.6□□□□□ -0.87
ATG4A-206ENST00000457035 ADCK2Q7Z695 626 aa9.6□□□□□ -0.87
ATG4A-206ENST00000457035 SPACA3Q8IXA5 215 aa9.6□□□□□ -0.87
ATG4A-206ENST00000457035 CACNA2D3Q8IZS8 1091 aa9.6□□□□□ -0.87
ATG4A-206ENST00000457035 ARHGEF39Q8N4T4 335 aa9.6□□□□□ -0.87
ATG4A-206ENST00000457035 ZNF740Q8NDX6 193 aa9.6□□□□□ -0.87
ATG4A-206ENST00000457035 MYRIPQ8NFW9 859 aa9.6□□□□□ -0.87
ATG4A-206ENST00000457035 KCNE4Q8WWG9 221 aa9.6□□□□□ -0.87
ATG4A-206ENST00000457035 TM4SF19Q96DZ7 209 aa9.6□□□□□ -0.87
ATG4A-206ENST00000457035 PHF21BQ96EK2 531 aa9.6□□□□□ -0.87
ATG4A-206ENST00000457035 THAP11Q96EK4 314 aa9.6□□□□□ -0.87
ATG4A-206ENST00000457035 WDR34Q96EX3 536 aa9.6□□□□□ -0.87
ATG4A-206ENST00000457035 TSNARE1Q96NA8 513 aa9.6□□□□□ -0.87
ATG4A-206ENST00000457035 ZIM3Q96PE6 472 aa9.6□□□□□ -0.87
ATG4A-206ENST00000457035 SPSB2Q99619 263 aa9.6□□□□□ -0.87
ATG4A-206ENST00000457035 CAPS2Q9BXY5 557 aa9.6□□□□□ -0.87
ATG4A-206ENST00000457035 SPNS1Q9H2V7 528 aa9.6□□□□□ -0.87
ATG4A-206ENST00000457035 ACTR5Q9H9F9 607 aaPredicted RBP9.6□□□□□ -0.87
ATG4A-206ENST00000457035 PELI2Q9HAT8 420 aa9.6□□□□□ -0.87
ATG4A-206ENST00000457035 LHX9Q9NQ69 397 aa9.6□□□□□ -0.87
ATG4A-206ENST00000457035 PADI1Q9ULC6 663 aa9.6□□□□□ -0.87
ATG4A-206ENST00000457035 DYRK1BQ9Y463 629 aa9.6□□□□□ -0.87
ATG4A-206ENST00000457035 LOC101059948A0A1B0GTJ6 334 aa9.59□□□□□ -0.87
ATG4A-206ENST00000457035 TRBC2A0A5B9 178 aa9.59□□□□□ -0.87
ATG4A-206ENST00000457035 HYKKA2RU49 373 aa9.59□□□□□ -0.87
ATG4A-206ENST00000457035 STX16-NPEPL1H3BU86 382 aa9.59□□□□□ -0.87
ATG4A-206ENST00000457035 K7EPI3 171 aa9.59□□□□□ -0.87
ATG4A-206ENST00000457035 MEN1O00255 615 aa9.59□□□□□ -0.87
ATG4A-206ENST00000457035 E2F3O00716 465 aa9.59□□□□□ -0.87
ATG4A-206ENST00000457035 STX16O14662 325 aa9.59□□□□□ -0.87
ATG4A-206ENST00000457035 TERTO14746 1132 aaKnown RBP9.59□□□□□ -0.87
ATG4A-206ENST00000457035 RRP8O43159 456 aaKnown RBP9.59□□□□□ -0.87
ATG4A-206ENST00000457035 KLK10O43240 276 aa9.59□□□□□ -0.87
ATG4A-206ENST00000457035 DLX3O60479 287 aa9.59□□□□□ -0.87
ATG4A-206ENST00000457035 MED26O95402 600 aa9.59□□□□□ -0.87
ATG4A-206ENST00000457035 EIF2S1P05198 315 aaKnown RBP9.59□□□□□ -0.87
ATG4A-206ENST00000457035 HBQ1P09105 142 aa9.59□□□□□ -0.87
ATG4A-206ENST00000457035 CCNYL3P0C7X3 344 aa9.59□□□□□ -0.87
ATG4A-206ENST00000457035 CD22P20273 847 aa9.59□□□□□ -0.87
ATG4A-206ENST00000457035 VARSP26640 1264 aaKnown RBP9.59□□□□□ -0.87
ATG4A-206ENST00000457035 ITPKBP27987 946 aa9.59□□□□□ -0.87
ATG4A-206ENST00000457035 GRK3P35626 688 aa9.59□□□□□ -0.87
ATG4A-206ENST00000457035 BCL6P41182 706 aa9.59□□□□□ -0.87
ATG4A-206ENST00000457035 ARSFP54793 590 aa9.59□□□□□ -0.87
ATG4A-206ENST00000457035 REEP5Q00765 189 aa9.59□□□□□ -0.87
ATG4A-206ENST00000457035 ABHD18Q0P651 414 aa9.59□□□□□ -0.87
ATG4A-206ENST00000457035 GRM7Q14831 915 aa9.59□□□□□ -0.87
ATG4A-206ENST00000457035 TBCCQ15814 346 aa9.59□□□□□ -0.87
ATG4A-206ENST00000457035 PDK4Q16654 411 aa9.59□□□□□ -0.87
ATG4A-206ENST00000457035 FAM214AQ32MH5 1076 aa9.59□□□□□ -0.87
ATG4A-206ENST00000457035 TNFAIP8L3Q5GJ75 292 aa9.59□□□□□ -0.87
ATG4A-206ENST00000457035 YOD1Q5VVQ6 348 aaPredicted RBP9.59□□□□□ -0.87
ATG4A-206ENST00000457035 ATG9BQ674R7 924 aa9.59□□□□□ -0.87
ATG4A-206ENST00000457035 FAM199XQ6PEV8 388 aaPredicted RBP9.59□□□□□ -0.87
ATG4A-206ENST00000457035 LRIG3Q6UXM1 1119 aa9.59□□□□□ -0.87
ATG4A-206ENST00000457035 LRRC70Q7Z2Q7 622 aa9.59□□□□□ -0.87
ATG4A-206ENST00000457035 TMPRSS11BQ86T26 416 aa9.59□□□□□ -0.87
ATG4A-206ENST00000457035 DSELQ8IZU8 1212 aa9.59□□□□□ -0.87
ATG4A-206ENST00000457035 C4orf33Q8N1A6 199 aa9.59□□□□□ -0.87
ATG4A-206ENST00000457035 ESX1Q8N693 406 aa9.59□□□□□ -0.87
ATG4A-206ENST00000457035 PTGR2Q8N8N7 351 aaPredicted RBP9.59□□□□□ -0.87
ATG4A-206ENST00000457035 BANPQ8N9N5 519 aa9.59□□□□□ -0.87
ATG4A-206ENST00000457035 MFSD9Q8NBP5 474 aa9.59□□□□□ -0.87
ATG4A-206ENST00000457035 GBP5Q96PP8 586 aa9.59□□□□□ -0.87
ATG4A-206ENST00000457035 C1QTNF3Q9BXJ4 246 aa9.59□□□□□ -0.87
ATG4A-206ENST00000457035 C12orf65Q9H3J6 166 aaKnown RBP9.59□□□□□ -0.87
ATG4A-206ENST00000457035 EHD1Q9H4M9 534 aa9.59□□□□□ -0.87
ATG4A-206ENST00000457035 GEMIN8Q9NWZ8 242 aaKnown RBP9.59□□□□□ -0.87
ATG4A-206ENST00000457035 COPG2Q9UBF2 871 aa9.59□□□□□ -0.87
ATG4A-206ENST00000457035 OPTCQ9UBM4 332 aa9.59□□□□□ -0.87
ATG4A-206ENST00000457035 DHCR7Q9UBM7 475 aaKnown RBP9.59□□□□□ -0.87
ATG4A-206ENST00000457035 GRID1Q9ULK0 1009 aa9.59□□□□□ -0.87
ATG4A-206ENST00000457035 ZNF490Q9ULM2 529 aaPredicted RBP9.59□□□□□ -0.87
ATG4A-206ENST00000457035 TMCO1Q9UM00 188 aa9.59□□□□□ -0.87
ATG4A-206ENST00000457035 TNPO3Q9Y5L0 923 aaKnown RBP9.59□□□□□ -0.87
ATG4A-206ENST00000457035 DOCK10Q96BY6 2186 aa9.58□□□□□ -0.88
ATG4A-206ENST00000457035 IGSF10Q6WRI0 2623 aa9.58□□□□□ -0.88
ATG4A-206ENST00000457035 CROCCQ5TZA2 2017 aa9.58□□□□□ -0.88
ATG4A-206ENST00000457035 A8MT66 165 aa9.58□□□□□ -0.88
ATG4A-206ENST00000457035 G3V2L1 256 aa9.58□□□□□ -0.88
ATG4A-206ENST00000457035 TXNDC9O14530 226 aa9.58□□□□□ -0.88
ATG4A-206ENST00000457035 COPEO14579 308 aa9.58□□□□□ -0.88
ATG4A-206ENST00000457035 CLGNO14967 610 aa9.58□□□□□ -0.88
ATG4A-206ENST00000457035 P2RX6O15547 441 aa9.58□□□□□ -0.88
ATG4A-206ENST00000457035 OR1F1O43749 312 aa9.58□□□□□ -0.88
ATG4A-206ENST00000457035 PLIN3O60664 434 aa9.58□□□□□ -0.88
ATG4A-206ENST00000457035 SMIM24O75264 130 aa9.58□□□□□ -0.88
ATG4A-206ENST00000457035 GLRA3O75311 464 aa9.58□□□□□ -0.88
ATG4A-206ENST00000457035 H2AFYO75367 372 aaKnown RBP9.58□□□□□ -0.88
ATG4A-206ENST00000457035 ONECUT2O95948 504 aa9.58□□□□□ -0.88
ATG4A-206ENST00000457035 PROCP04070 461 aa9.58□□□□□ -0.88
ATG4A-206ENST00000457035 KLK3P07288 261 aaPredicted RBP9.58□□□□□ -0.88
ATG4A-206ENST00000457035 CAPN1P07384 714 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms