RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 WWP2O00308 870 aa9.97□□□□□ -0.81
CLIP4-208ENST00000456385 TEX28O15482 410 aa9.97□□□□□ -0.81
CLIP4-208ENST00000456385 SNAI1O95863 264 aaPredicted RBP9.97□□□□□ -0.81
CLIP4-208ENST00000456385 PDYNP01213 254 aa9.97□□□□□ -0.81
CLIP4-208ENST00000456385 CCNYL3P0C7X3 344 aa9.97□□□□□ -0.81
CLIP4-208ENST00000456385 TRAPPC2P0DI81 140 aa9.97□□□□□ -0.81
CLIP4-208ENST00000456385 TRAPPC2BP0DI82 140 aa9.97□□□□□ -0.81
CLIP4-208ENST00000456385 KIR2DL3P43628 341 aa9.97□□□□□ -0.81
CLIP4-208ENST00000456385 CDC42EP1Q00587 391 aa9.97□□□□□ -0.81
CLIP4-208ENST00000456385 MXD1Q05195 221 aa9.97□□□□□ -0.81
CLIP4-208ENST00000456385 UPP1Q16831 310 aa9.97□□□□□ -0.81
CLIP4-208ENST00000456385 NADSYN1Q6IA69 706 aa9.97□□□□□ -0.81
CLIP4-208ENST00000456385 DPY19L3Q6ZPD9 716 aa9.97□□□□□ -0.81
CLIP4-208ENST00000456385 ADAMTSL2Q86TH1 951 aa9.97□□□□□ -0.81
CLIP4-208ENST00000456385 SLC44A2Q8IWA5 706 aaPredicted RBP9.97□□□□□ -0.81
CLIP4-208ENST00000456385 CACTIN-AS1Q8N1I8 211 aa9.97□□□□□ -0.81
CLIP4-208ENST00000456385 CFAP52Q8N1V2 620 aa9.97□□□□□ -0.81
CLIP4-208ENST00000456385 ZFAND1Q8TCF1 268 aa9.97□□□□□ -0.81
CLIP4-208ENST00000456385 ULK4Q96C45 1275 aa9.97□□□□□ -0.81
CLIP4-208ENST00000456385 FRMD6Q96NE9 622 aa9.97□□□□□ -0.81
CLIP4-208ENST00000456385 PANX1Q96RD7 426 aa9.97□□□□□ -0.81
CLIP4-208ENST00000456385 PKMYT1Q99640 499 aa9.97□□□□□ -0.81
CLIP4-208ENST00000456385 EPYCQ99645 322 aa9.97□□□□□ -0.81
CLIP4-208ENST00000456385 ABHD16BQ9H3Z7 469 aa9.97□□□□□ -0.81
CLIP4-208ENST00000456385 MROH8Q9H579 483 aa9.97□□□□□ -0.81
CLIP4-208ENST00000456385 ATP13A2Q9NQ11 1180 aa9.97□□□□□ -0.81
CLIP4-208ENST00000456385 WWOXQ9NZC7 414 aa9.97□□□□□ -0.81
CLIP4-208ENST00000456385 UBA2Q9UBT2 640 aaPredicted RBP9.97□□□□□ -0.81
CLIP4-208ENST00000456385 TMPRSS11EQ9UL52 423 aa9.97□□□□□ -0.81
CLIP4-208ENST00000456385 SNX7Q9UNH6 387 aa9.97□□□□□ -0.81
CLIP4-208ENST00000456385 TLR6Q9Y2C9 796 aa9.97□□□□□ -0.81
CLIP4-208ENST00000456385 PCDHGC4Q9Y5F7 938 aa9.97□□□□□ -0.81
CLIP4-208ENST00000456385 PCDHGA2Q9Y5H1 932 aa9.97□□□□□ -0.81
CLIP4-208ENST00000456385 DNMT3AQ9Y6K1 912 aaPredicted RBP9.97□□□□□ -0.81
CLIP4-208ENST00000456385 NT5C1B-RDH14C9J2C7 533 aa9.96□□□□□ -0.81
CLIP4-208ENST00000456385 PLK4O00444 970 aa9.96□□□□□ -0.81
CLIP4-208ENST00000456385 CDK2AP1O14519 115 aa9.96□□□□□ -0.81
CLIP4-208ENST00000456385 PRAMEF11O60813 436 aa9.96□□□□□ -0.81
CLIP4-208ENST00000456385 SCO1O75880 301 aa9.96□□□□□ -0.81
CLIP4-208ENST00000456385 SDC1P18827 310 aa9.96□□□□□ -0.81
CLIP4-208ENST00000456385 PKLRP30613 574 aa9.96□□□□□ -0.81
CLIP4-208ENST00000456385 IL12RB1P42701 662 aa9.96□□□□□ -0.81
CLIP4-208ENST00000456385 OR1E2P47887 323 aa9.96□□□□□ -0.81
CLIP4-208ENST00000456385 GPR15P49685 360 aa9.96□□□□□ -0.81
CLIP4-208ENST00000456385 KCNQ1P51787 676 aa9.96□□□□□ -0.81
CLIP4-208ENST00000456385 PPIGQ13427 754 aaKnown RBP eCLIP9.96□□□□□ -0.81
CLIP4-208ENST00000456385 VEPH1Q14D04 833 aa9.96□□□□□ -0.81
CLIP4-208ENST00000456385 C5orf22Q49AR2 442 aa9.96□□□□□ -0.81
CLIP4-208ENST00000456385 FAM131AQ6UXB0 335 aa9.96□□□□□ -0.81
CLIP4-208ENST00000456385 CCDC149Q6ZUS6 474 aa9.96□□□□□ -0.81
CLIP4-208ENST00000456385 MOB2Q70IA6 237 aa9.96□□□□□ -0.81
CLIP4-208ENST00000456385 ZNF367Q7RTV3 350 aa9.96□□□□□ -0.81
CLIP4-208ENST00000456385 VWA5B2Q8N398 1253 aa9.96□□□□□ -0.81
CLIP4-208ENST00000456385 RNF175Q8N4F7 328 aa9.96□□□□□ -0.81
CLIP4-208ENST00000456385 CAMKK1Q8N5S9 505 aa9.96□□□□□ -0.81
CLIP4-208ENST00000456385 KLHDC9Q8NEP7 349 aa9.96□□□□□ -0.81
CLIP4-208ENST00000456385 WDR36Q8NI36 951 aaKnown RBP9.96□□□□□ -0.81
CLIP4-208ENST00000456385 GPR152Q8TDT2 470 aa9.96□□□□□ -0.81
CLIP4-208ENST00000456385 CRELD1Q96HD1 420 aa9.96□□□□□ -0.81
CLIP4-208ENST00000456385 OPALINQ96PE5 141 aa9.96□□□□□ -0.81
CLIP4-208ENST00000456385 VPS35Q96QK1 796 aa9.96□□□□□ -0.81
CLIP4-208ENST00000456385 CD244Q9BZW8 370 aa9.96□□□□□ -0.81
CLIP4-208ENST00000456385 CIPCQ9C0C6 399 aa9.96□□□□□ -0.81
CLIP4-208ENST00000456385 SLC22A4Q9H015 551 aa9.96□□□□□ -0.81
CLIP4-208ENST00000456385 SATB2Q9UPW6 733 aa9.96□□□□□ -0.81
CLIP4-208ENST00000456385 DHRS7Q9Y394 339 aa9.96□□□□□ -0.81
CLIP4-208ENST00000456385 MICAL3Q7RTP6 2002 aa9.96□□□□□ -0.81
CLIP4-208ENST00000456385 IGLV3-10A0A075B6K4 115 aa9.96□□□□□ -0.82
CLIP4-208ENST00000456385 MBLAC1A4D2B0 266 aaPredicted RBP9.96□□□□□ -0.82
CLIP4-208ENST00000456385 ARL5CA6NH57 179 aa9.96□□□□□ -0.82
CLIP4-208ENST00000456385 TMEM229AB2RXF0 380 aa9.96□□□□□ -0.82
CLIP4-208ENST00000456385 TNFRSF11BO00300 401 aa9.96□□□□□ -0.82
CLIP4-208ENST00000456385 FPGTO14772 594 aa9.96□□□□□ -0.82
CLIP4-208ENST00000456385 SCAMP3O14828 347 aaKnown RBP9.96□□□□□ -0.82
CLIP4-208ENST00000456385 POLR1CO15160 346 aaPredicted RBP9.96□□□□□ -0.82
CLIP4-208ENST00000456385 OPN1SWP03999 348 aa9.96□□□□□ -0.82
CLIP4-208ENST00000456385 CSF3P09919 207 aa9.96□□□□□ -0.82
CLIP4-208ENST00000456385 CYP2A6P11509 494 aaPredicted RBP9.96□□□□□ -0.82
CLIP4-208ENST00000456385 CKMT1AP12532 417 aa9.96□□□□□ -0.82
CLIP4-208ENST00000456385 LPOP22079 712 aaPredicted RBP9.96□□□□□ -0.82
CLIP4-208ENST00000456385 MLLT3P42568 568 aaPredicted RBP9.96□□□□□ -0.82
CLIP4-208ENST00000456385 PSPHP78330 225 aa9.96□□□□□ -0.82
CLIP4-208ENST00000456385 SCN1BQ07699 218 aa9.96□□□□□ -0.82
CLIP4-208ENST00000456385 FCHO2Q0JRZ9 810 aa9.96□□□□□ -0.82
CLIP4-208ENST00000456385 ZNF792Q3KQV3 632 aa9.96□□□□□ -0.82
CLIP4-208ENST00000456385 CYP27C1Q4G0S4 372 aa9.96□□□□□ -0.82
CLIP4-208ENST00000456385 SDE2Q6IQ49 451 aa9.96□□□□□ -0.82
CLIP4-208ENST00000456385 ABI3BPQ7Z7G0 1075 aa9.96□□□□□ -0.82
CLIP4-208ENST00000456385 RNF130Q86XS8 419 aa9.96□□□□□ -0.82
CLIP4-208ENST00000456385 CLECL1Q8IZS7 167 aa9.96□□□□□ -0.82
CLIP4-208ENST00000456385 RDH10Q8IZV5 341 aa9.96□□□□□ -0.82
CLIP4-208ENST00000456385 CLDN19Q8N6F1 224 aa9.96□□□□□ -0.82
CLIP4-208ENST00000456385 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.96□□□□□ -0.82
CLIP4-208ENST00000456385 NLGN4YQ8NFZ3 816 aaPredicted RBP9.96□□□□□ -0.82
CLIP4-208ENST00000456385 OR10G2Q8NGC3 310 aa9.96□□□□□ -0.82
CLIP4-208ENST00000456385 OR9Q2Q8NGE9 314 aa9.96□□□□□ -0.82
CLIP4-208ENST00000456385 DNAJB8Q8NHS0 232 aa9.96□□□□□ -0.82
CLIP4-208ENST00000456385 LKAAEAR1Q8TD35 194 aa9.96□□□□□ -0.82
CLIP4-208ENST00000456385 USP7Q93009 1102 aa9.96□□□□□ -0.82
CLIP4-208ENST00000456385 POP5Q969H6 163 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms