RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 TRBV23-1A0A0A0MS06 115 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 HAS3O00219 553 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 RGS5O15539 181 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 CELF2O95319 508 aaKnown RBP4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 OPN1SWP03999 348 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 CNPP09543 421 aaKnown RBP4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 VDRP11473 427 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 ARSBP15848 533 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 DNAJB2P25686 324 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 SDC2P34741 201 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 SERPINB10P48595 397 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 ZP1P60852 638 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 PRR5P85299 388 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 TEKQ02763 1124 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 PRKCDQ05655 676 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 CRHR2Q13324 411 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 BOP1Q14137 746 aaKnown RBP4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 TIGD6Q17RP2 521 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 PNCKQ6P2M8 343 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 TEX261Q6UWH6 196 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 OLIG3Q7RTU3 272 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 PHC2Q8IXK0 858 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 B3GNT7Q8NFL0 401 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 GIPC2Q8TF65 315 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 L3HYPDHQ96EM0 354 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 ZNF599Q96NL3 588 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 SMOQ99835 787 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 COLEC11Q9BWP8 271 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 TRIM54Q9BYV2 358 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 HOXC10Q9NYD6 342 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 GPRC5BQ9NZH0 403 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 CCNL1Q9UK58 526 aaPredicted RBP4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 ADAM28Q9UKQ2 775 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 OGDHLQ9ULD0 1010 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 RIMKLBQ9ULI2 386 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 ANGPTL3Q9Y5C1 460 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 U3KQ87 197 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 GPR179Q6PRD1 2367 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 SOWAHBA6NEL2 793 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 HMX3A6NHT5 357 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 GOLGA8CPA6NN73 597 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 GABRR3A8MPY1 467 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 LOC110117498-PIK3R3F6TDL0 507 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 FFAR1O14842 300 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 ANGPT2O15123 496 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 SLC22A5O76082 557 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 TBXA2RP21731 343 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 AKAP5P24588 427 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 IDH2P48735 452 aaKnown RBP4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 ST13P50502 369 aaKnown RBP4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 HUNKP57058 714 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 ERVFC1P60507 584 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 ABATP80404 500 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 DAB2P98082 770 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 MBTD1Q05BQ5 628 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 SNX17Q15036 470 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 MPEG1Q2M385 716 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 SLC25A52Q3SY17 297 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 PDZK1Q5T2W1 519 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 C10orf62Q5T681 223 aaPredicted RBP4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 OR2G6Q5TZ20 316 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 ALG1LQ6GMV1 187 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 ESPNLQ6ZVH7 1005 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 FAM126BQ8IXS8 530 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 LILRB2Q8N423 598 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 ZFP41Q8N8Y5 198 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 GALNT11Q8NCW6 608 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 TTLQ8NG68 377 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 WDR48Q8TAF3 677 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 UBASH3BQ8TF42 649 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 C8orf48Q96LL4 319 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 IL4I1Q96RQ9 567 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 ABHD1Q96SE0 405 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 TTLL2Q9BWV7 592 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 SLC39A8Q9C0K1 460 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 NXF3Q9H4D5 531 aaKnown RBP4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 BEX1Q9HBH7 125 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 CRTAC1Q9NQ79 661 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 OR12D3Q9UGF7 316 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 ZNF490Q9ULM2 529 aaPredicted RBP4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 SF3B6Q9Y3B4 125 aaKnown RBP4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 KLF2Q9Y5W3 355 aaPredicted RBP4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 TRPM6Q9BX84 2022 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 LRRC37AA6NMS7 1700 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 SLCO1B7G3V0H7 640 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 OR7A17O14581 309 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 FFAR3O14843 346 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 GPR42O15529 346 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 GATBO75879 557 aaKnown RBP4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 SERPINA1P01009 418 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 ITGB1P05556 798 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 KRT8P05787 483 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 ADRB1P08588 477 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 RPS17P08708 135 aaKnown RBP4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 LBPP18428 481 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 MYL9P24844 172 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 VIPR1P32241 457 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 ACVRL1P37023 503 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 POLR2JP52435 117 aaKnown RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms