RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 HTR6P50406 440 aa15.89■□□□□ 0.13
CCDC90B-202ENST00000455220 SEC24CP53992 1094 aa15.89■□□□□ 0.13
CCDC90B-202ENST00000455220 RPS15AP62244 130 aaKnown RBP15.89■□□□□ 0.13
CCDC90B-202ENST00000455220 ZFP36L1Q07352 338 aaKnown RBP15.89■□□□□ 0.13
CCDC90B-202ENST00000455220 CGB2Q6NT52 195 aa15.89■□□□□ 0.13
CCDC90B-202ENST00000455220 PLD3Q8IV08 490 aa15.89■□□□□ 0.13
CCDC90B-202ENST00000455220 TBC1D19Q8N5T2 526 aa15.89■□□□□ 0.13
CCDC90B-202ENST00000455220 ANKRD53Q8N9V6 530 aa15.89■□□□□ 0.13
CCDC90B-202ENST00000455220 MFSD9Q8NBP5 474 aa15.89■□□□□ 0.13
CCDC90B-202ENST00000455220 TTLQ8NG68 377 aa15.89■□□□□ 0.13
CCDC90B-202ENST00000455220 TWIST2Q8WVJ9 160 aa15.89■□□□□ 0.13
CCDC90B-202ENST00000455220 THAP11Q96EK4 314 aa15.89■□□□□ 0.13
CCDC90B-202ENST00000455220 ZFYVE21Q9BQ24 234 aa15.89■□□□□ 0.13
CCDC90B-202ENST00000455220 TUBB1Q9H4B7 451 aa15.89■□□□□ 0.13
CCDC90B-202ENST00000455220 ELOVL6Q9H5J4 265 aa15.89■□□□□ 0.13
CCDC90B-202ENST00000455220 SYNPO2LQ9H987 977 aa15.89■□□□□ 0.13
CCDC90B-202ENST00000455220 FAM60AQ9NP50 221 aa15.89■□□□□ 0.13
CCDC90B-202ENST00000455220 VTI1BQ9UEU0 232 aa15.89■□□□□ 0.13
CCDC90B-202ENST00000455220 FIS1Q9Y3D6 152 aa15.89■□□□□ 0.13
CCDC90B-202ENST00000455220 PCDHGA4Q9Y5G9 962 aa15.89■□□□□ 0.13
CCDC90B-202ENST00000455220 ZNF195O14628 629 aa15.88■□□□□ 0.13
CCDC90B-202ENST00000455220 HDAC3O15379 428 aa15.88■□□□□ 0.13
CCDC90B-202ENST00000455220 OR1F1O43749 312 aa15.88■□□□□ 0.13
CCDC90B-202ENST00000455220 ULK1O75385 1050 aa15.88■□□□□ 0.13
CCDC90B-202ENST00000455220 CHEK2O96017 543 aa15.88■□□□□ 0.13
CCDC90B-202ENST00000455220 KITP10721 976 aa15.88■□□□□ 0.13
CCDC90B-202ENST00000455220 CDK4P11802 303 aa15.88■□□□□ 0.13
CCDC90B-202ENST00000455220 ALOX15P16050 662 aaPredicted RBP15.88■□□□□ 0.13
CCDC90B-202ENST00000455220 GABRA4P48169 554 aa15.88■□□□□ 0.13
CCDC90B-202ENST00000455220 PDX1P52945 283 aa15.88■□□□□ 0.13
CCDC90B-202ENST00000455220 HSD11B2P80365 405 aa15.88■□□□□ 0.13
CCDC90B-202ENST00000455220 IFT88Q13099 833 aa15.88■□□□□ 0.13
CCDC90B-202ENST00000455220 TRA2AQ13595 282 aaKnown RBP eCLIP15.88■□□□□ 0.13
CCDC90B-202ENST00000455220 RBBP5Q15291 538 aaKnown RBP15.88■□□□□ 0.13
CCDC90B-202ENST00000455220 VN1R5Q7Z5H4 357 aa15.88■□□□□ 0.13
CCDC90B-202ENST00000455220 WDR75Q8IWA0 830 aaKnown RBP15.88■□□□□ 0.13
CCDC90B-202ENST00000455220 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.88■□□□□ 0.13
CCDC90B-202ENST00000455220 D2HGDHQ8N465 521 aa15.88■□□□□ 0.13
CCDC90B-202ENST00000455220 DNAJC22Q8N4W6 341 aa15.88■□□□□ 0.13
CCDC90B-202ENST00000455220 HUS1BQ8NHY5 278 aa15.88■□□□□ 0.13
CCDC90B-202ENST00000455220 CCDC74BQ96LY2 380 aa15.88■□□□□ 0.13
CCDC90B-202ENST00000455220 OR2A5Q96R48 311 aa15.88■□□□□ 0.13
CCDC90B-202ENST00000455220 PDE7BQ9NP56 450 aa15.88■□□□□ 0.13
CCDC90B-202ENST00000455220 ADGRE2Q9UHX3 823 aa15.88■□□□□ 0.13
CCDC90B-202ENST00000455220 ZFP69BQ9UJL9 534 aa15.88■□□□□ 0.13
CCDC90B-202ENST00000455220 PPT2Q9UMR5 302 aa15.88■□□□□ 0.13
CCDC90B-202ENST00000455220 AP1M2Q9Y6Q5 423 aa15.88■□□□□ 0.13
CCDC90B-202ENST00000455220 CNOT1A5YKK6 2376 aaKnown RBP15.88■□□□□ 0.13
CCDC90B-202ENST00000455220 ADAMTS20P59510 1910 aa15.88■□□□□ 0.13
CCDC90B-202ENST00000455220 PDYNP01213 254 aa15.87■□□□□ 0.13
CCDC90B-202ENST00000455220 JUNP05412 331 aaKnown RBP15.87■□□□□ 0.13
CCDC90B-202ENST00000455220 MSL3P1P0C860 447 aa15.87■□□□□ 0.13
CCDC90B-202ENST00000455220 NELFEP18615 380 aaKnown RBP15.87■□□□□ 0.13
CCDC90B-202ENST00000455220 DRD4P21917 467 aa15.87■□□□□ 0.13
CCDC90B-202ENST00000455220 PIK3CBP42338 1070 aa15.87■□□□□ 0.13
CCDC90B-202ENST00000455220 INHBCP55103 352 aa15.87■□□□□ 0.13
CCDC90B-202ENST00000455220 INSM1Q01101 510 aaPredicted RBP15.87■□□□□ 0.13
CCDC90B-202ENST00000455220 ABRAXAS2Q15018 415 aa15.87■□□□□ 0.13
CCDC90B-202ENST00000455220 ZC3H12BQ5HYM0 836 aaKnown RBP15.87■□□□□ 0.13
CCDC90B-202ENST00000455220 SNAP47Q5SQN1 464 aa15.87■□□□□ 0.13
CCDC90B-202ENST00000455220 CDCP2Q5VXM1 449 aa15.87■□□□□ 0.13
CCDC90B-202ENST00000455220 ADNP2Q6IQ32 1131 aa15.87■□□□□ 0.13
CCDC90B-202ENST00000455220 RBM44Q6ZP01 1051 aaKnown RBP15.87■□□□□ 0.13
CCDC90B-202ENST00000455220 MAVSQ7Z434 540 aa15.87■□□□□ 0.13
CCDC90B-202ENST00000455220 TRIM46Q7Z4K8 759 aa15.87■□□□□ 0.13
CCDC90B-202ENST00000455220 VN1R4Q7Z5H5 301 aa15.87■□□□□ 0.13
CCDC90B-202ENST00000455220 ZNF473Q8WTR7 871 aaKnown RBP15.87■□□□□ 0.13
CCDC90B-202ENST00000455220 SELENOMQ8WWX9 145 aa15.87■□□□□ 0.13
CCDC90B-202ENST00000455220 FCRL4Q96PJ5 515 aa15.87■□□□□ 0.13
CCDC90B-202ENST00000455220 CCT7Q99832 543 aa15.87■□□□□ 0.13
CCDC90B-202ENST00000455220 EPN3Q9H201 632 aa15.87■□□□□ 0.13
CCDC90B-202ENST00000455220 FARSBQ9NSD9 589 aaKnown RBP15.87■□□□□ 0.13
CCDC90B-202ENST00000455220 USH1CQ9Y6N9 552 aa15.87■□□□□ 0.13
CCDC90B-202ENST00000455220 FOXE1O00358 373 aaPredicted RBP15.87■□□□□ 0.13
CCDC90B-202ENST00000455220 PIP5K1BO14986 540 aa15.87■□□□□ 0.13
CCDC90B-202ENST00000455220 PCNAP12004 261 aa15.87■□□□□ 0.13
CCDC90B-202ENST00000455220 CEACAM1P13688 526 aa15.87■□□□□ 0.13
CCDC90B-202ENST00000455220 HSD3B1P14060 373 aa15.87■□□□□ 0.13
CCDC90B-202ENST00000455220 HSD3B2P26439 372 aa15.87■□□□□ 0.13
CCDC90B-202ENST00000455220 MLLT3P42568 568 aaPredicted RBP15.87■□□□□ 0.13
CCDC90B-202ENST00000455220 SEPHS1P49903 392 aa15.87■□□□□ 0.13
CCDC90B-202ENST00000455220 NEK2P51955 445 aa15.87■□□□□ 0.13
CCDC90B-202ENST00000455220 BTKQ06187 659 aa15.87■□□□□ 0.13
CCDC90B-202ENST00000455220 CYP4F3Q08477 520 aa15.87■□□□□ 0.13
CCDC90B-202ENST00000455220 PDCD2Q16342 344 aaPredicted RBP15.87■□□□□ 0.13
CCDC90B-202ENST00000455220 XKR7Q5GH72 579 aa15.87■□□□□ 0.13
CCDC90B-202ENST00000455220 CREB3L4Q8TEY5 395 aa15.87■□□□□ 0.13
CCDC90B-202ENST00000455220 SIKE1Q9BRV8 207 aa15.87■□□□□ 0.13
CCDC90B-202ENST00000455220 BRF2Q9HAW0 419 aa15.87■□□□□ 0.13
CCDC90B-202ENST00000455220 ENAMQ9NRM1 1142 aa15.87■□□□□ 0.13
CCDC90B-202ENST00000455220 SOHLH2Q9NX45 425 aa15.87■□□□□ 0.13
CCDC90B-202ENST00000455220 PSD3Q9NYI0 1048 aa15.87■□□□□ 0.13
CCDC90B-202ENST00000455220 A0A0J9YVX5 310 aa15.86■□□□□ 0.13
CCDC90B-202ENST00000455220 ANKDD1BA6NHY2 528 aa15.86■□□□□ 0.13
CCDC90B-202ENST00000455220 A8MU76 341 aa15.86■□□□□ 0.13
CCDC90B-202ENST00000455220 MAP3K7O43318 606 aa15.86■□□□□ 0.13
CCDC90B-202ENST00000455220 HCRTR1O43613 425 aa15.86■□□□□ 0.13
CCDC90B-202ENST00000455220 SKAP2O75563 359 aaPredicted RBP15.86■□□□□ 0.13
CCDC90B-202ENST00000455220 CLEC3AO75596 197 aa15.86■□□□□ 0.13
CCDC90B-202ENST00000455220 TBX6O95947 436 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms