RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 MIPOL1Q8TD10 442 aa12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 ZNF296Q8WUU4 475 aaPredicted RBP12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 SCAMP4Q969E2 229 aa12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 TMEM159Q96B96 161 aa12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 MTERF3Q96E29 417 aa12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 HSH2DQ96JZ2 352 aa12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 COX4I2Q96KJ9 171 aa12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 DEFB118Q96PH6 123 aa12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 ZNF347Q96SE7 839 aa12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 PSD2Q9BQI7 771 aa12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 ATG10Q9H0Y0 220 aa12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 LTB4R2Q9NPC1 389 aa12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 PCDH12Q9NPG4 1184 aa12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 SCN3BQ9NY72 215 aa12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 KIF26AQ9ULI4 1882 aaPredicted RBP12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 PCDHGB3Q9Y5G1 929 aa12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 MYOFQ9NZM1 2061 aa12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 DENND4AQ7Z401 1863 aa12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 KIAA1549LQ6ZVL6 1849 aa12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 TMEM229AB2RXF0 380 aa12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 SULT1C4O75897 302 aa12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 LRATO95237 230 aa12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 ZNF682O95780 498 aa12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 LAMP1P11279 417 aa12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 TYRP14679 529 aa12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 CCR2P41597 374 aa12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 RANBP1P43487 201 aa12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 CRYBA2P53672 197 aa12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 KCNJ10P78508 379 aa12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 IL5RAQ01344 420 aa12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 FADDQ13158 208 aa12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 NAE1Q13564 534 aa12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 RGNQ15493 299 aa12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 CPTPQ5TA50 214 aa12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 KIAA1614Q5VZ46 1190 aa12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 TMEM215Q68D42 235 aa12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 XKR5Q6UX68 686 aa12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 LIPIQ6XZB0 460 aa12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 ZNF621Q6ZSS3 439 aa12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 RASGEF1AQ8N9B8 481 aa12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 TTC29Q8NA56 475 aaPredicted RBP12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 ABHD11Q8NFV4 315 aa12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 OR7G3Q8NG95 312 aa12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 WFIKKN2Q8TEU8 576 aa12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 SKA2Q8WVK7 121 aaPredicted RBP12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 HRASLS5Q96KN8 279 aa12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 BARD1Q99728 777 aaKnown RBP12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 CORO1BQ9BR76 489 aa12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 RIOK2Q9BVS4 552 aaKnown RBP12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 SGPP1Q9BX95 441 aa12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 BBS2Q9BXC9 721 aa12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 CRISPLD2Q9H0B8 497 aa12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 ABCG8Q9H221 673 aa12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 REEP1Q9H902 201 aa12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 ANKHQ9HCJ1 492 aa12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 TDP1Q9NUW8 608 aa12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 ADPRHL2Q9NX46 363 aa12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 GIN1Q9NXP7 522 aa12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 SAGE1Q9NXZ1 904 aa12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 CD84Q9UIB8 345 aa12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 VPS4AQ9UN37 437 aa12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 BTBD3Q9Y2F9 522 aa12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 GMPPBQ9Y5P6 360 aa12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 PCM1Q15154 2024 aa12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 HTTP42858 3142 aa12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 NOTCH4Q99466 2003 aa12.07□□□□□ -0.48
ECHDC1-209ENST00000454591 NEDD8-MDP1E9PL57 170 aa12.06□□□□□ -0.48
ECHDC1-209ENST00000454591 TSPAN6O43657 245 aa12.06□□□□□ -0.48
ECHDC1-209ENST00000454591 MITFO75030 526 aaPredicted RBP12.06□□□□□ -0.48
ECHDC1-209ENST00000454591 LEFTY1O75610 366 aa12.06□□□□□ -0.48
ECHDC1-209ENST00000454591 POLR2EP19388 210 aaKnown RBP12.06□□□□□ -0.48
ECHDC1-209ENST00000454591 GRK3P35626 688 aa12.06□□□□□ -0.48
ECHDC1-209ENST00000454591 MVDP53602 400 aa12.06□□□□□ -0.48
ECHDC1-209ENST00000454591 ATN1P54259 1190 aaPredicted RBP12.06□□□□□ -0.48
ECHDC1-209ENST00000454591 PHEXP78562 749 aa12.06□□□□□ -0.48
ECHDC1-209ENST00000454591 FCHO2Q0JRZ9 810 aa12.06□□□□□ -0.48
ECHDC1-209ENST00000454591 GTF2H3Q13889 308 aa12.06□□□□□ -0.48
ECHDC1-209ENST00000454591 ZNF846Q147U1 533 aa12.06□□□□□ -0.48
ECHDC1-209ENST00000454591 SPCS2Q15005 226 aa12.06□□□□□ -0.48
ECHDC1-209ENST00000454591 ARHGAP15Q53QZ3 475 aa12.06□□□□□ -0.48
ECHDC1-209ENST00000454591 UBE2UQ5VVX9 321 aa12.06□□□□□ -0.48
ECHDC1-209ENST00000454591 MED27Q6P2C8 311 aa12.06□□□□□ -0.48
ECHDC1-209ENST00000454591 DCDC5Q6ZRR9 648 aa12.06□□□□□ -0.48
ECHDC1-209ENST00000454591 HORMAD1Q86X24 394 aa12.06□□□□□ -0.48
ECHDC1-209ENST00000454591 CLECL1Q8IZS7 167 aa12.06□□□□□ -0.48
ECHDC1-209ENST00000454591 C1orf52Q8N6N3 182 aaKnown RBP12.06□□□□□ -0.48
ECHDC1-209ENST00000454591 C11orf65Q8NCR3 313 aa12.06□□□□□ -0.48
ECHDC1-209ENST00000454591 CNIH3Q8TBE1 160 aa12.06□□□□□ -0.48
ECHDC1-209ENST00000454591 S100ZQ8WXG8 99 aa12.06□□□□□ -0.48
ECHDC1-209ENST00000454591 FCGR1BQ92637 280 aa12.06□□□□□ -0.48
ECHDC1-209ENST00000454591 LINC00615Q96LM1 132 aaPredicted RBP12.06□□□□□ -0.48
ECHDC1-209ENST00000454591 COQ10AQ96MF6 247 aa12.06□□□□□ -0.48
ECHDC1-209ENST00000454591 FOPNLQ96NB1 174 aa12.06□□□□□ -0.48
ECHDC1-209ENST00000454591 DACH2Q96NX9 599 aa12.06□□□□□ -0.48
ECHDC1-209ENST00000454591 ZNF300Q96RE9 604 aaPredicted RBP12.06□□□□□ -0.48
ECHDC1-209ENST00000454591 PKP4Q99569 1192 aa12.06□□□□□ -0.48
ECHDC1-209ENST00000454591 DOHHQ9BU89 302 aa12.06□□□□□ -0.48
ECHDC1-209ENST00000454591 EFCAB11Q9BUY7 163 aa12.06□□□□□ -0.48
ECHDC1-209ENST00000454591 EBPLQ9BY08 206 aa12.06□□□□□ -0.48
ECHDC1-209ENST00000454591 TMEM38AQ9H6F2 299 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms