RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 ZNF8P17098 575 aaPredicted RBP4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 CCND1P24385 295 aa4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 CEACAM8P31997 349 aaPredicted RBP4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 ACVR1BP36896 505 aa4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 NSG1P42857 185 aa4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 CSNK1DP48730 415 aa4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 LMAN1P49257 510 aa4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 DCDC1P59894 354 aa4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 RHOAP61586 193 aa4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 POLR2LP62875 67 aaKnown RBP4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 APBA1Q02410 837 aa4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 NFYCQ13952 458 aa4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 VMACQ2NL98 169 aa4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 CT83Q5H943 113 aa4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 CYB5R2Q6BCY4 276 aa4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 PGM2L1Q6PCE3 622 aa4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 LRRC31Q6UY01 552 aa4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 ZNF547Q8IVP9 402 aa4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 BCL6BQ8N143 479 aaPredicted RBP4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 TMEM178AQ8NBL3 297 aa4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 C1orf162Q8NEQ5 155 aaPredicted RBP4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 OR52N2Q8NGI0 321 aa4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 NT5C3BQ969T7 300 aa4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 VPS50Q96JG6 964 aa4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 WDR24Q96S15 920 aa4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 EIF3CQ99613 913 aaKnown RBP4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 TRIM62Q9BVG3 475 aa4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 TM6SF1Q9BZW5 370 aa4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 ZYG11BQ9C0D3 744 aa4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 CHRNA10Q9GZZ6 450 aa4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 ATG10Q9H0Y0 220 aa4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 KCTD10Q9H3F6 313 aa4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 ANKRD10Q9NXR5 420 aa4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 PSD3Q9NYI0 1048 aa4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 C6orf203Q9P0P8 240 aaPredicted RBP4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 COX16Q9P0S2 106 aa4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 CD84Q9UIB8 345 aa4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 POMT2Q9UKY4 750 aa4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 NOL7Q9UMY1 257 aaKnown RBP4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 NEU3Q9UQ49 428 aa4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 EML6Q6ZMW3 1958 aa4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 LOC102723996A0A087X1L8 192 aa4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 KLHL33A6NCF5 533 aa4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 OR6C74A6NCV1 312 aa4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 GOLGA6CA6NDK9 693 aa4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 GOLGA6BA6NDN3 693 aa4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 NPIPB15A6NHN6 443 aaPredicted RBP4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 NPIPA2E9PIF3 369 aa4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 NPIPA3F8WFD2 350 aa4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 HS6ST1O60243 411 aa4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 NME2P1O60361 137 aa4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 OR10H2O60403 315 aa4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 OR2B3O76000 313 aa4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 SEC24DO94855 1032 aaPredicted RBP4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 CLEC2LP0C7M8 214 aa4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 GOLGA6DP0CG33 693 aa4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 BMP5P22003 454 aa4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 PRDX3P30048 256 aaKnown RBP4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 DRG2P55039 364 aaKnown RBP4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 LGALS4P56470 323 aa4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 ACTG1P63261 375 aa4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 KLC1Q07866 573 aa4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 LOXL1Q08397 574 aaPredicted RBP4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 NME3Q13232 169 aa4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 TRIM14Q14142 442 aa4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 FASTKQ14296 549 aaKnown RBP4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 GALNT3Q14435 633 aa4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 ZIC1Q15915 447 aa4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 RPE65Q16518 533 aa4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 MUM1Q2TAK8 710 aa4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 TFDP3Q5H9I0 405 aa4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 MANEALQ5VSG8 457 aa4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 DENND2CQ68D51 928 aa4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 UNC5DQ6UXZ4 953 aa4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 SRLQ86TD4 932 aa4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 TSPAN33Q86UF1 283 aa4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 LYSMD2Q8IV50 215 aa4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 POGLUT1Q8NBL1 392 aa4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 OR10H5Q8NGA6 315 aa4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 AP2M1Q96CW1 435 aa4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 CXorf40BQ96DE9 158 aa4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 MCCC1Q96RQ3 725 aaPredicted RBP4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 ZNF700Q9H0M5 742 aa4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 CARD9Q9H257 536 aa4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 SLCO5A1Q9H2Y9 848 aa4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 WDCPQ9H6R7 721 aa4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 SEC61A2Q9H9S3 476 aa4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 EML4Q9HC35 981 aaKnown RBP4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 FAM207AQ9NSI2 230 aaPredicted RBP4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 GOLGA6AQ9NYA3 693 aa4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 ATXN10Q9UBB4 475 aa4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 ZNF629Q9UEG4 869 aaPredicted RBP4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 MTRF1LQ9UGC7 380 aaKnown RBP4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 HPCAL4Q9UM19 191 aa4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 EIF3LQ9Y262 564 aaKnown RBP4.88□□□□□ -1.63
SBDSP1-204ENST00000453858 ARHGAP21Q5T5U3 1957 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 IGHV4-30-2A0A087WSY4 118 aa4.87□□□□□ -1.63
SBDSP1-204ENST00000453858 A0A1B0GVC2 190 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms