RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 CELA2AP08217 269 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 GNLYP22749 145 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 CCND1P24385 295 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 GRK3P35626 688 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 GMPRP36959 345 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 EMP2P54851 167 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 PLTPP55058 493 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 TAS2R39P59534 338 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 ETF1P62495 437 aaKnown RBP9.19□□□□□ -0.94
USP54-207ENST00000451492 SLC7A5Q01650 507 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 SLMAPQ14BN4 828 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 EFTUD2Q15029 972 aaKnown RBP eCLIP9.19□□□□□ -0.94
USP54-207ENST00000451492 TRADDQ15628 312 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 TSNQ15631 228 aaKnown RBP9.19□□□□□ -0.94
USP54-207ENST00000451492 NDUFA9Q16795 377 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 C18orf21Q32NC0 220 aaPredicted RBP9.19□□□□□ -0.94
USP54-207ENST00000451492 MINDY4Q4G0A6 757 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 FBXO48Q5FWF7 155 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 CATSPEREQ5SY80 951 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 DUPD1Q68J44 220 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 SBSNQ6UWP8 590 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 LINC00696Q6ZRV3 163 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 VN1R4Q7Z5H5 301 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 TMPRSS11BQ86T26 416 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 ASPGQ86U10 573 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 CEP97Q8IW35 865 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 CTAGE3PQ8IX95 158 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 Q8NA96 180 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 KCT2Q8NC54 265 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 ANKRD49Q8WVL7 239 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 ZNF592Q92610 1267 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 MRRFQ96E11 262 aaKnown RBP9.19□□□□□ -0.94
USP54-207ENST00000451492 VPS39Q96JC1 886 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 MAGEB10Q96LZ2 347 aaPredicted RBP9.19□□□□□ -0.94
USP54-207ENST00000451492 OR4K3Q96R72 315 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 SGPP1Q9BX95 441 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 PCBD2Q9H0N5 130 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 SPNS1Q9H2V7 528 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 PRM3Q9NNZ6 103 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 SEMA3GQ9NS98 782 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 NSMCE4AQ9NXX6 385 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 WHRNQ9P202 907 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 MKL2Q9ULH7 1088 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 VPS4AQ9UN37 437 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 CDC14AQ9UNH5 594 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 MTO1Q9Y2Z2 717 aaKnown RBP9.19□□□□□ -0.94
USP54-207ENST00000451492 DYRK1BQ9Y463 629 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 PCDHGB7Q9Y5F8 929 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 IGHV3-20A0A0C4DH32 117 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 OR2W5A6NFC9 320 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 TXNDC9O14530 226 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 PHGDHO43175 533 aaKnown RBP9.18□□□□□ -0.94
USP54-207ENST00000451492 CDC123O75794 336 aaPredicted RBP9.18□□□□□ -0.94
USP54-207ENST00000451492 FAM155BO75949 473 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 URI1O94763 535 aaPredicted RBP9.18□□□□□ -0.94
USP54-207ENST00000451492 F10P00742 488 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 SPTA1P02549 2419 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 SLC35G6P0C7Q6 338 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 COX6A1P12074 109 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 NPPBP16860 134 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 CXCR2P25025 360 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 HNF4AP41235 474 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 GLRBP48167 497 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 CCR8P51685 355 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 EFNA3P52797 238 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 AP1S2P56377 157 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 OLR1P78380 273 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 Q0VFX4 171 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 CSHL1Q14406 222 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 INPP5JQ15735 1006 aaPredicted RBP9.18□□□□□ -0.94
USP54-207ENST00000451492 PPP1R3AQ16821 1122 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 ZXDCQ2QGD7 858 aaPredicted RBP9.18□□□□□ -0.94
USP54-207ENST00000451492 PLEKHN1Q494U1 663 aaPredicted RBP9.18□□□□□ -0.94
USP54-207ENST00000451492 GARNL3Q5VVW2 1013 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 C8orf74Q6P047 294 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 LANCL3Q6ZV70 420 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 ZC3H7AQ8IWR0 971 aaKnown RBP9.18□□□□□ -0.94
USP54-207ENST00000451492 ZADH2Q8N4Q0 377 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 NKAPQ8N5F7 415 aaKnown RBP9.18□□□□□ -0.94
USP54-207ENST00000451492 SIRT6Q8N6T7 355 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 CAMKVQ8NCB2 501 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 ZNF740Q8NDX6 193 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 FBXO25Q8TCJ0 367 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 SLC13A3Q8WWT9 602 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 ATL1Q8WXF7 558 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 TM9SF4Q92544 642 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 CDKL2Q92772 493 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 NEIL2Q969S2 332 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 PNPLA2Q96AD5 504 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 FBXL8Q96CD0 374 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 MOCOSQ96EN8 888 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 C19orf60Q96EN9 201 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 MVB12AQ96EY5 273 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 VPS50Q96JG6 964 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 HAUS8Q9BT25 410 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 LHPPQ9H008 270 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 RAB17Q9H0T7 212 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 RHOJQ9H4E5 214 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 ANKHQ9HCJ1 492 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 MKKSQ9NPJ1 570 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms