RNA–Protein interactions for RNA: ENST00000450829.5

TM9SF4-205, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 550 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-205ENST00000450829 DDX39BQ13838 428 aaKnown RBP5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 TRIM25Q14258 630 aaKnown RBP5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 CAPRIN1Q14444 709 aaKnown RBP5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 SLBPQ14493 270 aaKnown RBP eCLIP5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 FAM174BQ3ZCQ3 159 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 SPIN4Q56A73 249 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 PAGE2BQ5JRK9 111 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 SPANXN4Q5MJ08 99 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 CATSPEREQ5SY80 951 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 WLSQ5T9L3 541 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 ACSM2BQ68CK6 577 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 ADNP2Q6IQ32 1131 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 MED27Q6P2C8 311 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 ZFP1Q6P2D0 407 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 SLC2A7Q6PXP3 512 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 GCNT7Q6ZNI0 430 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 MSANTD1Q6ZTZ1 278 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 LPCAT2Q7L5N7 544 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 CHST15Q7LFX5 561 aaPredicted RBP5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 WDR5BQ86VZ2 330 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 SLC15A3Q8IY34 581 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 LAS2Q8IYD9 372 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 TBC1D21Q8IYX1 336 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 RNF175Q8N4F7 328 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 RNF148Q8N7C7 305 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 LMNTD1Q8N9Z9 388 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 FAM156AQ8NDB6 213 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 PHC3Q8NDX5 983 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 HIPK4Q8NE63 616 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 OR7G3Q8NG95 312 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 CLHC1Q8NHS4 586 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 SLC26A7Q8TE54 656 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 SETD7Q8WTS6 366 aaKnown RBP5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 HMGB4Q8WW32 186 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 NRG4Q8WWG1 115 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 SLC13A3Q8WWT9 602 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 SMPDL3AQ92484 453 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 TESCQ96BS2 214 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 MTFMTQ96DP5 389 aaKnown RBP5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 C11orf24Q96F05 449 aaPredicted RBP5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 APIPQ96GX9 242 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 C12orf66Q96MD2 445 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 WDR92Q96MX6 357 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 ANKRD27Q96NW4 1050 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 HHIPQ96QV1 700 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 HAUS8Q9BT25 410 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 RAB11FIP5Q9BXF6 653 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 EBPLQ9BY08 206 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 KRTAP3-3Q9BYR6 98 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 KRTAP3-2Q9BYR7 98 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 SPNS1Q9H2V7 528 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 MUC13Q9H3R2 512 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 OSGEPL1Q9H4B0 414 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 PELI2Q9HAT8 420 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 IL1RL2Q9HB29 575 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 SGK2Q9HBY8 427 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 WASH6PQ9NQA3 447 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 DMRT3Q9NQL9 472 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 CMTM6Q9NX76 183 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 VPS29Q9UBQ0 182 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 CDV3Q9UKY7 258 aaKnown RBP5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 PPT2Q9UMR5 302 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 RUVBL1Q9Y265 456 aaKnown RBP5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 WDR37Q9Y2I8 494 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 TSC22D4Q9Y3Q8 395 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 CFAP20Q9Y6A4 193 aaKnown RBP5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 SPEGQ15772 3267 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 IGSF10Q6WRI0 2623 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 NUP210LQ5VU65 1888 aa5.56□□□□□ -1.52
TM9SF4-205ENST00000450829 FREM2Q5SZK8 3169 aa5.55□□□□□ -1.52
TM9SF4-205ENST00000450829 PCDH15Q96QU1 1955 aa5.55□□□□□ -1.52
TM9SF4-205ENST00000450829 ASPMQ8IZT6 3477 aa5.55□□□□□ -1.52
TM9SF4-205ENST00000450829 TRBV5-3A0A0A0MS03 114 aa5.55□□□□□ -1.52
TM9SF4-205ENST00000450829 PRSS51A0A1B0GVH4 220 aa5.55□□□□□ -1.52
TM9SF4-205ENST00000450829 TCRBV3S1A0A5B6 114 aa5.55□□□□□ -1.52
TM9SF4-205ENST00000450829 DCDC2BA2VCK2 349 aa5.55□□□□□ -1.52
TM9SF4-205ENST00000450829 POM121BA6NF01 834 aa5.55□□□□□ -1.52
TM9SF4-205ENST00000450829 MAGEB17A8MXT2 336 aa5.55□□□□□ -1.52
TM9SF4-205ENST00000450829 H0Y8X5 98 aa5.55□□□□□ -1.52
TM9SF4-205ENST00000450829 FOXE1O00358 373 aaPredicted RBP5.55□□□□□ -1.52
TM9SF4-205ENST00000450829 TOR1BO14657 336 aa5.55□□□□□ -1.52
TM9SF4-205ENST00000450829 TNFRSF10CO14798 259 aa5.55□□□□□ -1.52
TM9SF4-205ENST00000450829 SLC30A4O14863 429 aa5.55□□□□□ -1.52
TM9SF4-205ENST00000450829 CASQ2O14958 399 aaPredicted RBP5.55□□□□□ -1.52
TM9SF4-205ENST00000450829 NVLO15381 856 aaKnown RBP5.55□□□□□ -1.52
TM9SF4-205ENST00000450829 GDF9O60383 454 aa5.55□□□□□ -1.52
TM9SF4-205ENST00000450829 DNAJA2O60884 412 aa5.55□□□□□ -1.52
TM9SF4-205ENST00000450829 LRP3O75074 770 aa5.55□□□□□ -1.52
TM9SF4-205ENST00000450829 KCNH1O95259 989 aa5.55□□□□□ -1.52
TM9SF4-205ENST00000450829 ETHE1O95571 254 aa5.55□□□□□ -1.52
TM9SF4-205ENST00000450829 ANP32DO95626 131 aa5.55□□□□□ -1.52
TM9SF4-205ENST00000450829 APBB3O95704 486 aa5.55□□□□□ -1.52
TM9SF4-205ENST00000450829 PGRP06401 933 aa5.55□□□□□ -1.52
TM9SF4-205ENST00000450829 MTHFD1P11586 935 aaKnown RBP5.55□□□□□ -1.52
TM9SF4-205ENST00000450829 PCNAP12004 261 aa5.55□□□□□ -1.52
TM9SF4-205ENST00000450829 TCN1P20061 433 aaPredicted RBP5.55□□□□□ -1.52
TM9SF4-205ENST00000450829 ATP6V1B2P21281 511 aa5.55□□□□□ -1.52
TM9SF4-205ENST00000450829 IDSP22304 550 aa5.55□□□□□ -1.52
TM9SF4-205ENST00000450829 TACR1P25103 407 aa5.55□□□□□ -1.52
TM9SF4-205ENST00000450829 RPL10P27635 214 aaKnown RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms