RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 NT5DC3Q86UY8 548 aa7.37□□□□□ -1.23
LINC01961-201ENST00000449954 SULF2Q8IWU5 870 aa7.37□□□□□ -1.23
LINC01961-201ENST00000449954 TBC1D21Q8IYX1 336 aa7.37□□□□□ -1.23
LINC01961-201ENST00000449954 PHC3Q8NDX5 983 aa7.37□□□□□ -1.23
LINC01961-201ENST00000449954 OR52N2Q8NGI0 321 aa7.37□□□□□ -1.23
LINC01961-201ENST00000449954 SGMS2Q8NHU3 365 aa7.37□□□□□ -1.23
LINC01961-201ENST00000449954 LINC01560Q8TB33 94 aa7.37□□□□□ -1.23
LINC01961-201ENST00000449954 TSGA13Q96PP4 275 aa7.37□□□□□ -1.23
LINC01961-201ENST00000449954 YIPF2Q9BWQ6 316 aa7.37□□□□□ -1.23
LINC01961-201ENST00000449954 GOLPH3LQ9H4A5 285 aa7.37□□□□□ -1.23
LINC01961-201ENST00000449954 UGT1A7Q9HAW7 530 aa7.37□□□□□ -1.23
LINC01961-201ENST00000449954 UGT1A10Q9HAW8 530 aa7.37□□□□□ -1.23
LINC01961-201ENST00000449954 UGT1A8Q9HAW9 530 aa7.37□□□□□ -1.23
LINC01961-201ENST00000449954 LPAR3Q9UBY5 353 aa7.37□□□□□ -1.23
LINC01961-201ENST00000449954 ZNF629Q9UEG4 869 aaPredicted RBP7.37□□□□□ -1.23
LINC01961-201ENST00000449954 HOOK1Q9UJC3 728 aaKnown RBP7.37□□□□□ -1.23
LINC01961-201ENST00000449954 USF3Q68DE3 2245 aa7.37□□□□□ -1.23
LINC01961-201ENST00000449954 A0A087X1B8 175 aa7.36□□□□□ -1.23
LINC01961-201ENST00000449954 QSOX1O00391 747 aa7.36□□□□□ -1.23
LINC01961-201ENST00000449954 NDC80O14777 642 aa7.36□□□□□ -1.23
LINC01961-201ENST00000449954 AURKAO14965 403 aa7.36□□□□□ -1.23
LINC01961-201ENST00000449954 SGTAO43765 313 aa7.36□□□□□ -1.23
LINC01961-201ENST00000449954 PEX1O43933 1283 aa7.36□□□□□ -1.23
LINC01961-201ENST00000449954 TMCC2O75069 709 aa7.36□□□□□ -1.23
LINC01961-201ENST00000449954 MED26O95402 600 aa7.36□□□□□ -1.23
LINC01961-201ENST00000449954 TGFB1P01137 390 aa7.36□□□□□ -1.23
LINC01961-201ENST00000449954 ANXA5P08758 320 aa7.36□□□□□ -1.23
LINC01961-201ENST00000449954 GSTM1P09488 218 aa7.36□□□□□ -1.23
LINC01961-201ENST00000449954 ERVK-10P10266 1014 aa7.36□□□□□ -1.23
LINC01961-201ENST00000449954 UCHL3P15374 230 aa7.36□□□□□ -1.23
LINC01961-201ENST00000449954 PAX1P15863 534 aa7.36□□□□□ -1.23
LINC01961-201ENST00000449954 CHRNB2P17787 502 aa7.36□□□□□ -1.23
LINC01961-201ENST00000449954 MIPP30301 263 aa7.36□□□□□ -1.23
LINC01961-201ENST00000449954 TRHRP34981 398 aaPredicted RBP7.36□□□□□ -1.23
LINC01961-201ENST00000449954 SOX5P35711 763 aa7.36□□□□□ -1.23
LINC01961-201ENST00000449954 SLC26A3P40879 764 aa7.36□□□□□ -1.23
LINC01961-201ENST00000449954 ST13P50502 369 aaKnown RBP7.36□□□□□ -1.23
LINC01961-201ENST00000449954 ITGA8P53708 1063 aa7.36□□□□□ -1.23
LINC01961-201ENST00000449954 TNK1Q13470 666 aa7.36□□□□□ -1.23
LINC01961-201ENST00000449954 ACKR1Q16570 336 aa7.36□□□□□ -1.23
LINC01961-201ENST00000449954 CLEC16AQ2KHT3 1053 aa7.36□□□□□ -1.23
LINC01961-201ENST00000449954 WIPI1Q5MNZ9 446 aaPredicted RBP7.36□□□□□ -1.23
LINC01961-201ENST00000449954 UBAP2Q5T6F2 1119 aaKnown RBP7.36□□□□□ -1.23
LINC01961-201ENST00000449954 WLSQ5T9L3 541 aa7.36□□□□□ -1.23
LINC01961-201ENST00000449954 HIST2H2BDQ6DRA6 164 aa7.36□□□□□ -1.23
LINC01961-201ENST00000449954 FIGLAQ6QHK4 219 aa7.36□□□□□ -1.23
LINC01961-201ENST00000449954 ZNF227Q86WZ6 799 aa7.36□□□□□ -1.23
LINC01961-201ENST00000449954 ZC3H7AQ8IWR0 971 aaKnown RBP7.36□□□□□ -1.23
LINC01961-201ENST00000449954 AMER3Q8N944 861 aa7.36□□□□□ -1.23
LINC01961-201ENST00000449954 OR5AR1Q8NGP9 310 aa7.36□□□□□ -1.23
LINC01961-201ENST00000449954 ISL2Q96A47 359 aa7.36□□□□□ -1.23
LINC01961-201ENST00000449954 DCUN1D1Q96GG9 259 aa7.36□□□□□ -1.23
LINC01961-201ENST00000449954 CABS1Q96KC9 395 aa7.36□□□□□ -1.23
LINC01961-201ENST00000449954 C10orf90Q96M02 699 aa7.36□□□□□ -1.23
LINC01961-201ENST00000449954 CITED4Q96RK1 184 aa7.36□□□□□ -1.23
LINC01961-201ENST00000449954 TCF12Q99081 682 aa7.36□□□□□ -1.23
LINC01961-201ENST00000449954 TMPRSS13Q9BYE2 586 aa7.36□□□□□ -1.23
LINC01961-201ENST00000449954 STK33Q9BYT3 514 aa7.36□□□□□ -1.23
LINC01961-201ENST00000449954 ZDHHC11Q9H8X9 412 aa7.36□□□□□ -1.23
LINC01961-201ENST00000449954 ASF1AQ9Y294 204 aa7.36□□□□□ -1.23
LINC01961-201ENST00000449954 PKP3Q9Y446 797 aa7.36□□□□□ -1.23
LINC01961-201ENST00000449954 NPFFR2Q9Y5X5 522 aa7.36□□□□□ -1.23
LINC01961-201ENST00000449954 TENM1Q9UKZ4 2725 aa7.36□□□□□ -1.23
LINC01961-201ENST00000449954 IGHV3-20A0A0C4DH32 117 aa7.35□□□□□ -1.23
LINC01961-201ENST00000449954 A0A1B0GVC2 190 aa7.35□□□□□ -1.23
LINC01961-201ENST00000449954 TARM1B6A8C7 271 aa7.35□□□□□ -1.23
LINC01961-201ENST00000449954 AQP7O14520 342 aa7.35□□□□□ -1.23
LINC01961-201ENST00000449954 GAPDHSO14556 408 aaPredicted RBP7.35□□□□□ -1.23
LINC01961-201ENST00000449954 CASKO14936 926 aa7.35□□□□□ -1.23
LINC01961-201ENST00000449954 MFSD11O43934 449 aa7.35□□□□□ -1.23
LINC01961-201ENST00000449954 EIF4EBP3O60516 100 aaPredicted RBP7.35□□□□□ -1.23
LINC01961-201ENST00000449954 AP2A1O95782 977 aa7.35□□□□□ -1.23
LINC01961-201ENST00000449954 NDST3O95803 873 aa7.35□□□□□ -1.23
LINC01961-201ENST00000449954 IGHG3P01860 377 aa7.35□□□□□ -1.23
LINC01961-201ENST00000449954 TPH1P17752 444 aa7.35□□□□□ -1.23
LINC01961-201ENST00000449954 CFPP27918 469 aa7.35□□□□□ -1.23
LINC01961-201ENST00000449954 TPP2P29144 1249 aaPredicted RBP7.35□□□□□ -1.23
LINC01961-201ENST00000449954 PDHA2P29803 388 aa7.35□□□□□ -1.23
LINC01961-201ENST00000449954 GRIA3P42263 894 aa7.35□□□□□ -1.23
LINC01961-201ENST00000449954 HLCSP50747 726 aa7.35□□□□□ -1.23
LINC01961-201ENST00000449954 CAPRIN1Q14444 709 aaKnown RBP7.35□□□□□ -1.23
LINC01961-201ENST00000449954 ETFDHQ16134 617 aa7.35□□□□□ -1.23
LINC01961-201ENST00000449954 ZNF658BQ4V348 819 aaPredicted RBP7.35□□□□□ -1.23
LINC01961-201ENST00000449954 KLHDC7AQ5VTJ3 777 aa7.35□□□□□ -1.23
LINC01961-201ENST00000449954 DPY19L2P1Q6NXN4 242 aa7.35□□□□□ -1.23
LINC01961-201ENST00000449954 LANCL3Q6ZV70 420 aa7.35□□□□□ -1.23
LINC01961-201ENST00000449954 RPS19BP1Q86WX3 136 aaKnown RBP7.35□□□□□ -1.23
LINC01961-201ENST00000449954 MEX3DQ86XN8 651 aaKnown RBP7.35□□□□□ -1.23
LINC01961-201ENST00000449954 CREBRFQ8IUR6 639 aa7.35□□□□□ -1.23
LINC01961-201ENST00000449954 SHISA5Q8N114 240 aa7.35□□□□□ -1.23
LINC01961-201ENST00000449954 LIX1Q8N485 282 aa7.35□□□□□ -1.23
LINC01961-201ENST00000449954 PPM1NQ8N819 430 aa7.35□□□□□ -1.23
LINC01961-201ENST00000449954 OR5K2Q8NHB8 316 aa7.35□□□□□ -1.23
LINC01961-201ENST00000449954 HEXDCQ8WVB3 486 aa7.35□□□□□ -1.23
LINC01961-201ENST00000449954 ZUFSPQ96AP4 578 aa7.35□□□□□ -1.23
LINC01961-201ENST00000449954 SARAFQ96BY9 339 aa7.35□□□□□ -1.23
LINC01961-201ENST00000449954 VN1R1Q9GZP7 353 aa7.35□□□□□ -1.23
LINC01961-201ENST00000449954 DEFB127Q9H1M4 99 aa7.35□□□□□ -1.23
LINC01961-201ENST00000449954 CDCP1Q9H5V8 836 aa7.35□□□□□ -1.23
LINC01961-201ENST00000449954 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms