RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 TAPBPO15533 448 aa13.36□□□□□ -0.27
RTFDC1-204ENST00000449062 PHGDHO43175 533 aaKnown RBP13.36□□□□□ -0.27
RTFDC1-204ENST00000449062 IGHEP01854 428 aa13.36□□□□□ -0.27
RTFDC1-204ENST00000449062 STATHP02808 62 aa13.36□□□□□ -0.27
RTFDC1-204ENST00000449062 CD1DP15813 335 aa13.36□□□□□ -0.27
RTFDC1-204ENST00000449062 GGT5P36269 586 aa13.36□□□□□ -0.27
RTFDC1-204ENST00000449062 SLC6A12P48065 614 aa13.36□□□□□ -0.27
RTFDC1-204ENST00000449062 USP10Q14694 798 aaKnown RBP13.36□□□□□ -0.27
RTFDC1-204ENST00000449062 C18orf21Q32NC0 220 aaPredicted RBP13.36□□□□□ -0.27
RTFDC1-204ENST00000449062 CATSPEREQ5SY80 951 aa13.36□□□□□ -0.27
RTFDC1-204ENST00000449062 UBAP2Q5T6F2 1119 aaKnown RBP13.36□□□□□ -0.27
RTFDC1-204ENST00000449062 C8orf74Q6P047 294 aa13.36□□□□□ -0.27
RTFDC1-204ENST00000449062 CTAGE6Q86UF2 777 aa13.36□□□□□ -0.27
RTFDC1-204ENST00000449062 THOC6Q86W42 341 aaKnown RBP13.36□□□□□ -0.27
RTFDC1-204ENST00000449062 CCDC25Q86WR0 208 aa13.36□□□□□ -0.27
RTFDC1-204ENST00000449062 OR11G2Q8NGC1 345 aa13.36□□□□□ -0.27
RTFDC1-204ENST00000449062 NEIL2Q969S2 332 aa13.36□□□□□ -0.27
RTFDC1-204ENST00000449062 ALKBH8Q96BT7 664 aaKnown RBP13.36□□□□□ -0.27
RTFDC1-204ENST00000449062 RHBDF1Q96CC6 855 aa13.36□□□□□ -0.27
RTFDC1-204ENST00000449062 FER1L6-AS2Q96M78 137 aa13.36□□□□□ -0.27
RTFDC1-204ENST00000449062 FUT8Q9BYC5 575 aa13.36□□□□□ -0.27
RTFDC1-204ENST00000449062 FAM129AQ9BZQ8 928 aa13.36□□□□□ -0.27
RTFDC1-204ENST00000449062 SPNS1Q9H2V7 528 aa13.36□□□□□ -0.27
RTFDC1-204ENST00000449062 SOX17Q9H6I2 414 aaPredicted RBP13.36□□□□□ -0.27
RTFDC1-204ENST00000449062 ZNF552Q9H707 407 aaPredicted RBP13.36□□□□□ -0.27
RTFDC1-204ENST00000449062 SEMA3GQ9NS98 782 aa13.36□□□□□ -0.27
RTFDC1-204ENST00000449062 MAP4K5Q9Y4K4 846 aa13.36□□□□□ -0.27
RTFDC1-204ENST00000449062 DOCK10Q96BY6 2186 aa13.36□□□□□ -0.27
RTFDC1-204ENST00000449062 SPENQ96T58 3664 aaKnown RBP13.35□□□□□ -0.27
RTFDC1-204ENST00000449062 A6NL46 340 aa13.35□□□□□ -0.27
RTFDC1-204ENST00000449062 PEX12O00623 359 aa13.35□□□□□ -0.27
RTFDC1-204ENST00000449062 WISP1O95388 367 aa13.35□□□□□ -0.27
RTFDC1-204ENST00000449062 CCDC166P0CW27 439 aa13.35□□□□□ -0.27
RTFDC1-204ENST00000449062 FBLP22087 321 aaKnown RBP13.35□□□□□ -0.27
RTFDC1-204ENST00000449062 ECHS1P30084 290 aa13.35□□□□□ -0.27
RTFDC1-204ENST00000449062 SPRP35270 261 aaPredicted RBP13.35□□□□□ -0.27
RTFDC1-204ENST00000449062 GMPRP36959 345 aa13.35□□□□□ -0.27
RTFDC1-204ENST00000449062 SCTRP47872 440 aa13.35□□□□□ -0.27
RTFDC1-204ENST00000449062 HNMTP50135 292 aa13.35□□□□□ -0.27
RTFDC1-204ENST00000449062 CCR8P51685 355 aa13.35□□□□□ -0.27
RTFDC1-204ENST00000449062 PGDP52209 483 aa13.35□□□□□ -0.27
RTFDC1-204ENST00000449062 OCA2Q04671 838 aa13.35□□□□□ -0.27
RTFDC1-204ENST00000449062 TLE1Q04724 770 aa13.35□□□□□ -0.27
RTFDC1-204ENST00000449062 Q0VFX4 171 aa13.35□□□□□ -0.27
RTFDC1-204ENST00000449062 DLG1Q12959 904 aa13.35□□□□□ -0.27
RTFDC1-204ENST00000449062 MYBPC3Q14896 1274 aa13.35□□□□□ -0.27
RTFDC1-204ENST00000449062 TGFBIQ15582 683 aa13.35□□□□□ -0.27
RTFDC1-204ENST00000449062 COLEC12Q5KU26 742 aa13.35□□□□□ -0.27
RTFDC1-204ENST00000449062 CDKL4Q5MAI5 379 aa13.35□□□□□ -0.27
RTFDC1-204ENST00000449062 PRSS41Q7RTY9 318 aa13.35□□□□□ -0.27
RTFDC1-204ENST00000449062 ADAMTSL2Q86TH1 951 aa13.35□□□□□ -0.27
RTFDC1-204ENST00000449062 PDSS2Q86YH6 399 aa13.35□□□□□ -0.27
RTFDC1-204ENST00000449062 GALNT16Q8N428 558 aa13.35□□□□□ -0.27
RTFDC1-204ENST00000449062 AFAP1L2Q8N4X5 818 aa13.35□□□□□ -0.27
RTFDC1-204ENST00000449062 PPM1NQ8N819 430 aa13.35□□□□□ -0.27
RTFDC1-204ENST00000449062 KCT2Q8NC54 265 aa13.35□□□□□ -0.27
RTFDC1-204ENST00000449062 CAMKVQ8NCB2 501 aa13.35□□□□□ -0.27
RTFDC1-204ENST00000449062 OR9A4Q8NGU2 314 aa13.35□□□□□ -0.27
RTFDC1-204ENST00000449062 SLC13A3Q8WWT9 602 aa13.35□□□□□ -0.27
RTFDC1-204ENST00000449062 ZNF592Q92610 1267 aa13.35□□□□□ -0.27
RTFDC1-204ENST00000449062 MIEF2Q96C03 454 aa13.35□□□□□ -0.27
RTFDC1-204ENST00000449062 MOCOSQ96EN8 888 aa13.35□□□□□ -0.27
RTFDC1-204ENST00000449062 MMABQ96EY8 250 aaPredicted RBP13.35□□□□□ -0.27
RTFDC1-204ENST00000449062 TSPAN17Q96FV3 270 aa13.35□□□□□ -0.27
RTFDC1-204ENST00000449062 UNKQ9C0B0 810 aaKnown RBP13.35□□□□□ -0.27
RTFDC1-204ENST00000449062 DRC3Q9H069 523 aa13.35□□□□□ -0.27
RTFDC1-204ENST00000449062 ATP13A2Q9NQ11 1180 aa13.35□□□□□ -0.27
RTFDC1-204ENST00000449062 TRPC4Q9UBN4 977 aa13.35□□□□□ -0.27
RTFDC1-204ENST00000449062 FBXL4Q9UKA2 621 aa13.35□□□□□ -0.27
RTFDC1-204ENST00000449062 SLC22A14Q9Y267 594 aa13.35□□□□□ -0.27
RTFDC1-204ENST00000449062 SLC22A7Q9Y694 548 aa13.35□□□□□ -0.27
RTFDC1-204ENST00000449062 USP9YO00507 2555 aaPredicted RBP13.34□□□□□ -0.27
RTFDC1-204ENST00000449062 TNRC6AQ8NDV7 1962 aaKnown RBP13.34□□□□□ -0.27
RTFDC1-204ENST00000449062 TRBC2A0A5B9 178 aa13.34□□□□□ -0.27
RTFDC1-204ENST00000449062 H0YIG0 161 aa13.34□□□□□ -0.27
RTFDC1-204ENST00000449062 FFAR3O14843 346 aa13.34□□□□□ -0.27
RTFDC1-204ENST00000449062 GPR42O15529 346 aa13.34□□□□□ -0.27
RTFDC1-204ENST00000449062 PRAMEF4O60810 478 aa13.34□□□□□ -0.27
RTFDC1-204ENST00000449062 NSA2O95478 260 aaKnown RBP13.34□□□□□ -0.27
RTFDC1-204ENST00000449062 ANXA5P08758 320 aa13.34□□□□□ -0.27
RTFDC1-204ENST00000449062 SLC35E2BP0CK96 405 aa13.34□□□□□ -0.27
RTFDC1-204ENST00000449062 STMN1P16949 149 aa13.34□□□□□ -0.27
RTFDC1-204ENST00000449062 GDF5P43026 501 aa13.34□□□□□ -0.27
RTFDC1-204ENST00000449062 RAB10P61026 200 aa13.34□□□□□ -0.27
RTFDC1-204ENST00000449062 ATP6V0D1P61421 351 aa13.34□□□□□ -0.27
RTFDC1-204ENST00000449062 MAT1AQ00266 395 aaKnown RBP13.34□□□□□ -0.27
RTFDC1-204ENST00000449062 MEF2AQ02078 507 aaPredicted RBP13.34□□□□□ -0.27
RTFDC1-204ENST00000449062 NAB1Q13506 487 aa13.34□□□□□ -0.27
RTFDC1-204ENST00000449062 PWP1Q13610 501 aa13.34□□□□□ -0.27
RTFDC1-204ENST00000449062 EFTUD2Q15029 972 aaKnown RBP eCLIP13.34□□□□□ -0.279e-7■■■■□ 20.8
RTFDC1-204ENST00000449062 OR4D1Q15615 310 aa13.34□□□□□ -0.27
RTFDC1-204ENST00000449062 SYT16Q17RD7 645 aa13.34□□□□□ -0.27
RTFDC1-204ENST00000449062 GLE1Q53GS7 698 aaKnown RBP13.34□□□□□ -0.27
RTFDC1-204ENST00000449062 PRAMEF9Q5VWM5 478 aa13.34□□□□□ -0.27
RTFDC1-204ENST00000449062 NXPE4Q6UWF7 544 aa13.34□□□□□ -0.27
RTFDC1-204ENST00000449062 IGFL3Q6UXB1 125 aa13.34□□□□□ -0.27
RTFDC1-204ENST00000449062 SLCO4C1Q6ZQN7 724 aa13.34□□□□□ -0.27
RTFDC1-204ENST00000449062 ASPGQ86U10 573 aa13.34□□□□□ -0.27
RTFDC1-204ENST00000449062 ISCA2Q86U28 154 aa13.34□□□□□ -0.27
RTFDC1-204ENST00000449062 ZC3H7AQ8IWR0 971 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms