RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 KIAA1024LP59773 190 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 HSD11B2P80365 405 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 STX3Q13277 289 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 KCNAB2Q13303 367 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 LSM12Q3MHD2 195 aaKnown RBP5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 OTUD3Q5T2D3 398 aaPredicted RBP5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 CLDN19Q8N6F1 224 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 SIRT6Q8N6T7 355 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 OR9A1PQ8NGU1 263 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 B4GALNT2Q8NHY0 566 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 ADAMTS15Q8TE58 950 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 DCAKDQ8WVC6 231 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 PGAP3Q96FM1 320 aaPredicted RBP5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 CRELD1Q96HD1 420 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 MS4A14Q96JA4 679 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 PELOQ9BRX2 385 aaKnown RBP5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 TNFRSF19Q9NS68 423 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 PHF11Q9UIL8 331 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 KIAA1217Q5T5P2 1943 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 CCRL2O00421 344 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 EPHB6O15197 1021 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 CHRM1P11229 460 aaPredicted RBP5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 TRA2AQ13595 282 aaKnown RBP eCLIP5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 PWP1Q13610 501 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 DEFB110Q30KQ9 67 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 PTCHD3Q3KNS1 767 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 WFDC8Q8IUA0 241 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 ZSCAN4Q8NAM6 433 aaPredicted RBP5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 OR10H5Q8NGA6 315 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 FBXW5Q969U6 566 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 TIMD4Q96H15 378 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 TSGA13Q96PP4 275 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 BCL2L14Q9BZR8 327 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 SMURF1Q9HCE7 757 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 FKBP9O95302 570 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 CYB5AP00167 134 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 STATHP02808 62 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 CD82P27701 267 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 CSNK1DP48730 415 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 RASSF2P50749 326 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 EFNA3P52797 238 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 RPS7P62081 194 aaKnown RBP5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 BTN3A2P78410 334 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 POU4F3Q15319 338 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 TCTN1Q2MV58 587 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 ATP6AP1LQ52LC2 224 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 SIRPB2Q5JXA9 342 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 TMEM92Q6UXU6 159 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 CLEC17AQ6ZS10 378 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 FKBP9P1Q75LS8 142 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 ZNF765Q7L2R6 523 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 TECPR1Q7Z6L1 1165 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 KRT73Q86Y46 540 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 ZNF548Q8NEK5 533 aaPredicted RBP5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 OR52K2Q8NGK3 314 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 SLC9A6Q92581 669 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 PPP1R36Q96LQ0 422 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 ADAD1Q96M93 576 aaKnown RBP5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 MID1IP1Q9NPA3 183 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 DECR2Q9NUI1 292 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 ARL5AQ9Y689 179 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 CSNK1G3Q9Y6M4 447 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 TET1Q8NFU7 2136 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 CCDC162PA2VCL2 907 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 SLC9B1P1A6NJY1 282 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 BTNL10A8MVZ5 291 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 NPIPA2E9PIF3 369 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 NPIPA3F8WFD2 350 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 K7ESM1 405 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 YY2O15391 372 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 ZNF37AP17032 561 aaPredicted RBP5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 CDH5P33151 784 aaPredicted RBP5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 NUP62P37198 522 aaPredicted RBP5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 MAPK12P53778 367 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 RAB25P57735 213 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 IFI35P80217 286 aaPredicted RBP5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 MEF2AQ02078 507 aaPredicted RBP5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 DNASE1L3Q13609 305 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 CUL3Q13618 768 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 PTGR2Q8N8N7 351 aaPredicted RBP5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 PNPLA2Q96AD5 504 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 CCDC74BQ96LY2 380 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 SERPINB12Q96P63 405 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 VN1R3Q9BXE9 311 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 ARNT2Q9HBZ2 717 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 ABCB10Q9NRK6 738 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 MAT2BQ9NZL9 334 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 ZNF282Q9UDV7 671 aaPredicted RBP5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 ERRFI1Q9UJM3 462 aaPredicted RBP5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 ATP23Q9Y6H3 246 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 LOXHD1Q8IVV2 1947 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 TRAV17A0A0B4J275 112 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 hCG_1807616A0A1W2PRN6 198 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 TRPC5OSA6NMA1 111 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 FFAR3O14843 346 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 GPR42O15529 346 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 TOP3BO95985 862 aaKnown RBP5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 PTDSS1P48651 473 aaKnown RBP5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 TGFBR3Q03167 851 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 CHIT1Q13231 466 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms