RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 ALDH18A1P54886 795 aaKnown RBP13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 MEF2AQ02078 507 aaPredicted RBP13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 NAA30Q147X3 362 aaPredicted RBP13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 SETDB1Q15047 1291 aa13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 RBBP5Q15291 538 aaKnown RBP13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 PRTGQ2VWP7 1150 aa13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 GARNL3Q5VVW2 1013 aa13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 MLIPQ5VWP3 458 aa13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 INO80CQ6PI98 192 aaPredicted RBP13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 ASPGQ86U10 573 aa13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 KRT78Q8N1N4 520 aa13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 RIBC1Q8N443 379 aaPredicted RBP13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 MREGQ8N565 214 aa13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 MFSD9Q8NBP5 474 aa13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 OR2W6PQ8NHA6 318 aa13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 UBTD2Q8WUN7 234 aa13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 SLC13A3Q8WWT9 602 aa13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 GBP5Q96PP8 586 aa13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 ROPN1BQ9BZX4 212 aaPredicted RBP13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 FAM117AQ9C073 453 aa13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 AKIRIN1Q9H9L7 192 aaPredicted RBP13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 ROPN1Q9HAT0 212 aaPredicted RBP13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 IFT80Q9P2H3 777 aaPredicted RBP13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 IL17BQ9UHF5 180 aa13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 DCDC2Q9UHG0 476 aa13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 CDC14AQ9UNH5 594 aa13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 RUVBL1Q9Y265 456 aaKnown RBP13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 FARSAQ9Y285 508 aaKnown RBP13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 PCDHGA4Q9Y5G9 962 aa13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 TNPO3Q9Y5L0 923 aaKnown RBP13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 IGSF10Q6WRI0 2623 aa13.37□□□□□ -0.27
GTF3C3-206ENST00000448539 K7EPI3 171 aa13.37□□□□□ -0.27
GTF3C3-206ENST00000448539 LCMT2O60294 686 aaKnown RBP13.37□□□□□ -0.27
GTF3C3-206ENST00000448539 SERPIND1P05546 499 aa13.37□□□□□ -0.27
GTF3C3-206ENST00000448539 GSTA1P08263 222 aa13.37□□□□□ -0.27
GTF3C3-206ENST00000448539 CD63P08962 238 aa13.37□□□□□ -0.27
GTF3C3-206ENST00000448539 RAB40ALP0C0E4 278 aa13.37□□□□□ -0.27
GTF3C3-206ENST00000448539 EPB42P16452 691 aa13.37□□□□□ -0.27
GTF3C3-206ENST00000448539 TAC1P20366 129 aa13.37□□□□□ -0.27
GTF3C3-206ENST00000448539 PTPN4P29074 926 aa13.37□□□□□ -0.27
GTF3C3-206ENST00000448539 REEP5Q00765 189 aa13.37□□□□□ -0.27
GTF3C3-206ENST00000448539 IRF8Q02556 426 aa13.37□□□□□ -0.27
GTF3C3-206ENST00000448539 HIST2H2ACQ16777 129 aaPredicted RBP13.37□□□□□ -0.27
GTF3C3-206ENST00000448539 HKDC1Q2TB90 917 aa13.37□□□□□ -0.27
GTF3C3-206ENST00000448539 NKAIN1Q4KMZ8 207 aa13.37□□□□□ -0.27
GTF3C3-206ENST00000448539 XKR6Q5GH73 641 aa13.37□□□□□ -0.27
GTF3C3-206ENST00000448539 PAGE2BQ5JRK9 111 aa13.37□□□□□ -0.27
GTF3C3-206ENST00000448539 ATG9BQ674R7 924 aa13.37□□□□□ -0.27
GTF3C3-206ENST00000448539 HIST2H2AA3Q6FI13 130 aa13.37□□□□□ -0.27
GTF3C3-206ENST00000448539 LCN10Q6JVE6 187 aa13.37□□□□□ -0.27
GTF3C3-206ENST00000448539 PRMT9Q6P2P2 845 aa13.37□□□□□ -0.27
GTF3C3-206ENST00000448539 ZNF517Q6ZMY9 492 aaPredicted RBP13.37□□□□□ -0.27
GTF3C3-206ENST00000448539 SLCO4C1Q6ZQN7 724 aa13.37□□□□□ -0.27
GTF3C3-206ENST00000448539 GPR155Q7Z3F1 870 aa13.37□□□□□ -0.27
GTF3C3-206ENST00000448539 STARD8Q92502 1023 aa13.37□□□□□ -0.27
GTF3C3-206ENST00000448539 COL26A1Q96A83 441 aa13.37□□□□□ -0.27
GTF3C3-206ENST00000448539 SARGQ9BW04 601 aa13.37□□□□□ -0.27
GTF3C3-206ENST00000448539 PADI2Q9Y2J8 665 aa13.37□□□□□ -0.27
GTF3C3-206ENST00000448539 PCDHGA6Q9Y5G7 932 aa13.37□□□□□ -0.27
GTF3C3-206ENST00000448539 A0A1W2PPM1 405 aa13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 TK2O00142 265 aa13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 PRPF4O43172 522 aaKnown RBP eCLIP13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 KLK8O60259 260 aa13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 STATHP02808 62 aa13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 WT1P19544 449 aaPredicted RBP13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 F8A1P23610 371 aa13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 VARSP26640 1264 aaKnown RBP13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 AHRP35869 848 aa13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 GCGRP47871 477 aa13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 SCTRP47872 440 aa13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 CCT5P48643 541 aa13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 PIK3CGP48736 1102 aa13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 RGS1Q08116 209 aa13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 CHIT1Q13231 466 aa13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 LAPTM5Q13571 262 aa13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 SLBPQ14493 270 aaKnown RBP eCLIP13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 SLC9A5Q14940 896 aa13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 NCF4Q15080 339 aa13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 PCBP2Q15366 365 aaKnown RBP eCLIP13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 ZNF385CQ66K41 422 aaPredicted RBP13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 C16orf46Q6P387 395 aa13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 VN1R4Q7Z5H5 301 aa13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 METTL27Q8N6F8 245 aaPredicted RBP13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 TEX9Q8N6V9 391 aa13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 PTGR2Q8N8N7 351 aaPredicted RBP13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 ENDOVQ8N8Q3 282 aaKnown RBP13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 ZNF740Q8NDX6 193 aa13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 TRPV3Q8NET8 790 aa13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 TTLQ8NG68 377 aa13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 MZB1Q8WU39 189 aa13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 PHF21BQ96EK2 531 aa13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 MVB12AQ96EY5 273 aa13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 PTCD3Q96EY7 689 aaKnown RBP13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 C10orf90Q96M02 699 aa13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 BBC3Q96PG8 261 aaPredicted RBP13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 EFCAB11Q9BUY7 163 aa13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 PITHD1Q9GZP4 211 aaPredicted RBP13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 DRC3Q9H069 523 aa13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 EHD1Q9H4M9 534 aa13.36□□□□□ -0.27
GTF3C3-206ENST00000448539 ACTL8Q9H568 366 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms