RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 YWHAHQ04917 246 aaPredicted RBP10.41□□□□□ -0.74
LINC00342-202ENST00000448494 SPP2Q13103 211 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 COTL1Q14019 142 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 SMN1Q16637 294 aaKnown RBP10.41□□□□□ -0.74
LINC00342-202ENST00000448494 FSCN1Q16658 493 aaKnown RBP10.41□□□□□ -0.74
LINC00342-202ENST00000448494 KYAT1Q16773 422 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 SUPT20HL1Q3ZLR7 823 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 PYDC2Q56P42 97 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 RABL3Q5HYI8 236 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 CD276Q5ZPR3 534 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 TRIQKQ629K1 86 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 NOTUMQ6P988 496 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 NPNTQ6UXI9 565 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 C3P1Q6ZMU1 363 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 NLRC3Q7RTR2 1065 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 MILR1Q7Z6M3 343 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 SLC22A9Q8IVM8 553 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 ENTHD1Q8IYW4 607 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 TMEM132CQ8N3T6 1108 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 PQLC3Q8N755 202 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 CERS2Q96G23 380 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 APOL2Q9BQE5 337 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 CRB3Q9BUF7 120 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 GABARAPL1Q9H0R8 117 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 PPP2R3BQ9Y5P8 575 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 H3BM21 787 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 K7ENM7 598 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 PPP6CO00743 305 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 SCAMP3O14828 347 aaKnown RBP10.41□□□□□ -0.74
LINC00342-202ENST00000448494 PHYHO14832 338 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 HOXA2O43364 376 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 LSM8O95777 96 aaKnown RBP10.41□□□□□ -0.74
LINC00342-202ENST00000448494 PRKAR2AP13861 404 aaKnown RBP10.41□□□□□ -0.74
LINC00342-202ENST00000448494 HNRNPLP14866 589 aaKnown RBP eCLIP10.41□□□□□ -0.74
LINC00342-202ENST00000448494 TIMP2P16035 220 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 PVALBP20472 110 aaPredicted RBP10.41□□□□□ -0.74
LINC00342-202ENST00000448494 SSTR2P30874 369 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 CD96P40200 585 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 CLCN3P51790 818 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 GRM3Q14832 879 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 SF3A2Q15428 464 aaKnown RBP10.41□□□□□ -0.74
LINC00342-202ENST00000448494 ANKRD34AQ69YU3 496 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 TRMT11Q7Z4G4 463 aaKnown RBP10.41□□□□□ -0.74
LINC00342-202ENST00000448494 LHFPL3Q86UP9 236 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 CENPLQ8N0S6 344 aaPredicted RBP10.41□□□□□ -0.74
LINC00342-202ENST00000448494 RDM1Q8NG50 284 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 OR52K2Q8NGK3 314 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 MRPS24Q96EL2 167 aaKnown RBP10.41□□□□□ -0.74
LINC00342-202ENST00000448494 COL21A1Q96P44 957 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 AGAP2Q99490 1192 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 C19orf43Q9BQ61 176 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 MRPL57Q9BQC6 102 aaKnown RBP10.41□□□□□ -0.74
LINC00342-202ENST00000448494 MCOLN1Q9GZU1 580 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 CHMP1AQ9HD42 196 aaPredicted RBP10.41□□□□□ -0.74
LINC00342-202ENST00000448494 PLCXD1Q9NUJ7 323 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 MIOSQ9NXC5 875 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 ZNF222Q9UK12 451 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 BTRCQ9Y297 605 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 PADI2Q9Y2J8 665 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 PKP3Q9Y446 797 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 CDH10Q9Y6N8 788 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 C7orf66A4D0T2 115 aa10.4□□□□□ -0.74
LINC00342-202ENST00000448494 D6RAR5 112 aa10.4□□□□□ -0.74
LINC00342-202ENST00000448494 FZD9O00144 591 aa10.4□□□□□ -0.74
LINC00342-202ENST00000448494 RAD1O60671 282 aa10.4□□□□□ -0.74
LINC00342-202ENST00000448494 STX11O75558 287 aa10.4□□□□□ -0.74
LINC00342-202ENST00000448494 CDC123O75794 336 aaPredicted RBP10.4□□□□□ -0.74
LINC00342-202ENST00000448494 ATG12O94817 140 aa10.4□□□□□ -0.74
LINC00342-202ENST00000448494 ENDOD1O94919 500 aa10.4□□□□□ -0.74
LINC00342-202ENST00000448494 GADD45GO95257 159 aa10.4□□□□□ -0.74
LINC00342-202ENST00000448494 MT-CYBP00156 380 aaPredicted RBP10.4□□□□□ -0.74
LINC00342-202ENST00000448494 GNSP15586 552 aa10.4□□□□□ -0.74
LINC00342-202ENST00000448494 RAB4AP20338 218 aa10.4□□□□□ -0.74
LINC00342-202ENST00000448494 UBA1P22314 1058 aaKnown RBP10.4□□□□□ -0.74
LINC00342-202ENST00000448494 CALCRP30988 508 aa10.4□□□□□ -0.74
LINC00342-202ENST00000448494 SLC1A3P43003 542 aa10.4□□□□□ -0.74
LINC00342-202ENST00000448494 YBX1P67809 324 aaKnown RBP10.4□□□□□ -0.74
LINC00342-202ENST00000448494 EMX2Q04743 252 aa10.4□□□□□ -0.74
LINC00342-202ENST00000448494 SEC23BQ15437 767 aa10.4□□□□□ -0.74
LINC00342-202ENST00000448494 DENND1BQ6P3S1 775 aa10.4□□□□□ -0.74
LINC00342-202ENST00000448494 SCYL2Q6P3W7 929 aa10.4□□□□□ -0.74
LINC00342-202ENST00000448494 POMZP3Q6PJE2 187 aa10.4□□□□□ -0.74
LINC00342-202ENST00000448494 ZNF367Q7RTV3 350 aa10.4□□□□□ -0.74
LINC00342-202ENST00000448494 GLCCI1Q86VQ1 547 aa10.4□□□□□ -0.74
LINC00342-202ENST00000448494 NIM1KQ8IY84 436 aa10.4□□□□□ -0.74
LINC00342-202ENST00000448494 DCBLD1Q8N8Z6 715 aa10.4□□□□□ -0.74
LINC00342-202ENST00000448494 C11orf65Q8NCR3 313 aa10.4□□□□□ -0.74
LINC00342-202ENST00000448494 DNAJB14Q8TBM8 379 aa10.4□□□□□ -0.74
LINC00342-202ENST00000448494 CREB3L4Q8TEY5 395 aa10.4□□□□□ -0.74
LINC00342-202ENST00000448494 NR4A3Q92570 626 aa10.4□□□□□ -0.74
LINC00342-202ENST00000448494 ZBED6CLQ96FA7 236 aaPredicted RBP10.4□□□□□ -0.74
LINC00342-202ENST00000448494 SSX3Q99909 188 aa10.4□□□□□ -0.74
LINC00342-202ENST00000448494 WDR77Q9BQA1 342 aaPredicted RBP10.4□□□□□ -0.74
LINC00342-202ENST00000448494 TRMOQ9BU70 441 aa10.4□□□□□ -0.74
LINC00342-202ENST00000448494 LRRC3Q9BY71 257 aa10.4□□□□□ -0.74
LINC00342-202ENST00000448494 BARHL1Q9BZE3 327 aa10.4□□□□□ -0.74
LINC00342-202ENST00000448494 TWSG1Q9GZX9 223 aa10.4□□□□□ -0.74
LINC00342-202ENST00000448494 MIXL1Q9H2W2 232 aa10.4□□□□□ -0.74
LINC00342-202ENST00000448494 EVA1AQ9H8M9 152 aa10.4□□□□□ -0.74
LINC00342-202ENST00000448494 SLC28A3Q9HAS3 691 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms