RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 SEMA4BQ9NPR2 832 aaPredicted RBP7.23□□□□□ -1.25
AC004540.1-206ENST00000448056 GEMIN8Q9NWZ8 242 aaKnown RBP7.23□□□□□ -1.25
AC004540.1-206ENST00000448056 OCIAD1Q9NX40 245 aa7.23□□□□□ -1.25
AC004540.1-206ENST00000448056 SOHLH2Q9NX45 425 aa7.23□□□□□ -1.25
AC004540.1-206ENST00000448056 AKAP7Q9P0M2 348 aaPredicted RBP7.23□□□□□ -1.25
AC004540.1-206ENST00000448056 ZNF490Q9ULM2 529 aaPredicted RBP7.23□□□□□ -1.25
AC004540.1-206ENST00000448056 ANKRD12Q6UB98 2062 aa7.23□□□□□ -1.25
AC004540.1-206ENST00000448056 CCDC187A0A096LP49 1063 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 LOC105369274A0A096LPK9 316 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 LOC102723532A0A0G2JNH3 316 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 A0A0J9YVX5 310 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 A0A1B0GTL3 188 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 A0A1W2PNU3 283 aaPredicted RBP7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 TRBC2A0A5B9 178 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 EFCAB7A8K855 629 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 B4E171 279 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 H0YGG7 62 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 UBFD1O14562 309 aaKnown RBP7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 LCE2BO14633 110 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 HAT1O14929 419 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 OR1F1O43749 312 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 NPHS1O60500 1241 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 SRPX2O60687 465 aaPredicted RBP7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 CLDN9O95484 217 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 OTCP00480 354 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 NEFHP12036 1026 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 CHN1P15882 459 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 CD22P20273 847 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 NR1D1P20393 614 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 GRK2P25098 689 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 GRK3P35626 688 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 SERPINB5P36952 375 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 BCL6P41182 706 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 HNF4AP41235 474 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 TSPAN7P41732 249 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 CCR10P46092 362 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 GABRA4P48169 554 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 ERVPABLB-1P60509 514 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 ARF3P61204 181 aaPredicted RBP7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 RPS15AP62244 130 aaKnown RBP7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 MC2RQ01718 297 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 ACY1Q03154 408 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 LCP2Q13094 533 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 EIF3IQ13347 325 aaKnown RBP7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 LAPTM5Q13571 262 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 SLBPQ14493 270 aaKnown RBP eCLIP7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 IL11RAQ14626 422 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 RBBP5Q15291 538 aaKnown RBP7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 GPR19Q15760 415 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 CHI3L2Q15782 390 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 RBBP7Q16576 425 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 HIST2H2ACQ16777 129 aaPredicted RBP7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 PAGE2BQ5JRK9 111 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 CES4AQ5XG92 561 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 HIST2H2AA3Q6FI13 130 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 GRHL2Q6ISB3 625 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 TMIGD1Q6UXZ0 262 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 ZCCHC23Q6ZST2 131 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 RNF44Q7L0R7 432 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 DGLUCYQ7Z3D6 616 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 TRIM46Q7Z4K8 759 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 TMPRSS11BQ86T26 416 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 SYVN1Q86TM6 617 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 PLD3Q8IV08 490 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 OR4N4Q8N0Y3 316 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 LSMEM2Q8N112 164 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 KRT78Q8N1N4 520 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 BMPERQ8N8U9 685 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 MFSD9Q8NBP5 474 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 WDR36Q8NI36 951 aaKnown RBP7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 PPP1R14CQ8TAE6 165 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 FCRL4Q96PJ5 515 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 ZNF382Q96SR6 550 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 ZFYVE21Q9BQ24 234 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 TRMOQ9BU70 441 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 EFCAB11Q9BUY7 163 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 PITHD1Q9GZP4 211 aaPredicted RBP7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 DRC3Q9H069 523 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 SPNS1Q9H2V7 528 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 SYNPO2LQ9H987 977 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 FBXO8Q9NRD0 319 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 FGF21Q9NSA1 209 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 SIDT1Q9NXL6 827 aaKnown RBP7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 SERTAD3Q9UJW9 196 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 ZNF225Q9UK10 706 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 PLCL2Q9UPR0 1127 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 WASF3Q9UPY6 502 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 RNF11Q9Y3C5 154 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 LOXL2Q9Y4K0 774 aa7.22□□□□□ -1.25
AC004540.1-206ENST00000448056 PMS2P1A4D2B8 440 aa7.21□□□□□ -1.26
AC004540.1-206ENST00000448056 TMEM114B3SHH9 223 aa7.21□□□□□ -1.26
AC004540.1-206ENST00000448056 TMEM150CB9EJG8 249 aa7.21□□□□□ -1.26
AC004540.1-206ENST00000448056 H0YIV9 168 aa7.21□□□□□ -1.26
AC004540.1-206ENST00000448056 H3BMH7 237 aa7.21□□□□□ -1.26
AC004540.1-206ENST00000448056 PLD2O14939 933 aa7.21□□□□□ -1.26
AC004540.1-206ENST00000448056 POLR1CO15160 346 aaPredicted RBP7.21□□□□□ -1.26
AC004540.1-206ENST00000448056 ST8SIA5O15466 376 aa7.21□□□□□ -1.26
AC004540.1-206ENST00000448056 HYAL3O43820 417 aaPredicted RBP7.21□□□□□ -1.26
AC004540.1-206ENST00000448056 ESRRBO95718 433 aa7.21□□□□□ -1.26
AC004540.1-206ENST00000448056 SERPINE1P05121 402 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms