RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 MAGEA12P43365 314 aa15.61■□□□□ 0.09
SF3A1-204ENST00000447376 CSRP3P50461 194 aa15.61■□□□□ 0.09
SF3A1-204ENST00000447376 CSNK1G2P78368 415 aa15.61■□□□□ 0.09
SF3A1-204ENST00000447376 KCNAB2Q13303 367 aa15.61■□□□□ 0.09
SF3A1-204ENST00000447376 RASA2Q15283 850 aa15.61■□□□□ 0.09
SF3A1-204ENST00000447376 TSNAXIP1Q2TAA8 658 aa15.61■□□□□ 0.09
SF3A1-204ENST00000447376 PRTGQ2VWP7 1150 aa15.61■□□□□ 0.09
SF3A1-204ENST00000447376 LINC00303Q3SY05 128 aa15.61■□□□□ 0.09
SF3A1-204ENST00000447376 OVCH1Q7RTY7 1134 aa15.61■□□□□ 0.09
SF3A1-204ENST00000447376 TDRPQ86YL5 185 aa15.61■□□□□ 0.09
SF3A1-204ENST00000447376 OR2Y1Q8NGV0 311 aa15.61■□□□□ 0.09
SF3A1-204ENST00000447376 KCTD4Q8WVF5 259 aa15.61■□□□□ 0.09
SF3A1-204ENST00000447376 EXT2Q93063 718 aa15.61■□□□□ 0.09
SF3A1-204ENST00000447376 PTERQ96BW5 349 aa15.61■□□□□ 0.09
SF3A1-204ENST00000447376 RHBDF1Q96CC6 855 aa15.61■□□□□ 0.09
SF3A1-204ENST00000447376 NXNL1Q96CM4 212 aa15.61■□□□□ 0.09
SF3A1-204ENST00000447376 MMABQ96EY8 250 aaPredicted RBP15.61■□□□□ 0.09
SF3A1-204ENST00000447376 AIF1LQ9BQI0 150 aa15.61■□□□□ 0.09
SF3A1-204ENST00000447376 YIPF2Q9BWQ6 316 aa15.61■□□□□ 0.09
SF3A1-204ENST00000447376 DRC3Q9H069 523 aa15.61■□□□□ 0.09
SF3A1-204ENST00000447376 ALG9Q9H6U8 611 aa15.61■□□□□ 0.09
SF3A1-204ENST00000447376 PELI2Q9HAT8 420 aa15.61■□□□□ 0.09
SF3A1-204ENST00000447376 PRM3Q9NNZ6 103 aa15.61■□□□□ 0.09
SF3A1-204ENST00000447376 ACSS2Q9NR19 701 aa15.61■□□□□ 0.09
SF3A1-204ENST00000447376 IGSF5Q9NSI5 407 aa15.61■□□□□ 0.09
SF3A1-204ENST00000447376 ZNF282Q9UDV7 671 aaPredicted RBP15.61■□□□□ 0.09
SF3A1-204ENST00000447376 TBK1Q9UHD2 729 aa15.61■□□□□ 0.09
SF3A1-204ENST00000447376 RUVBL1Q9Y265 456 aaKnown RBP15.61■□□□□ 0.09
SF3A1-204ENST00000447376 SLC22A14Q9Y267 594 aa15.61■□□□□ 0.09
SF3A1-204ENST00000447376 SPTBP11277 2137 aa15.61■□□□□ 0.09
SF3A1-204ENST00000447376 SUPT3HB4E1H0 165 aa15.6■□□□□ 0.09
SF3A1-204ENST00000447376 CLGNO14967 610 aa15.6■□□□□ 0.09
SF3A1-204ENST00000447376 OR1F1O43749 312 aa15.6■□□□□ 0.09
SF3A1-204ENST00000447376 KERAO60938 352 aa15.6■□□□□ 0.09
SF3A1-204ENST00000447376 SUPT3HO75486 399 aa15.6■□□□□ 0.09
SF3A1-204ENST00000447376 CAPN1P07384 714 aa15.6■□□□□ 0.09
SF3A1-204ENST00000447376 RBP1P09455 135 aa15.6■□□□□ 0.09
SF3A1-204ENST00000447376 OTX2P32243 289 aa15.6■□□□□ 0.09
SF3A1-204ENST00000447376 GCGRP47871 477 aa15.6■□□□□ 0.09
SF3A1-204ENST00000447376 OR1D4P47884 311 aa15.6■□□□□ 0.09
SF3A1-204ENST00000447376 RGS1Q08116 209 aa15.6■□□□□ 0.09
SF3A1-204ENST00000447376 C19orf57Q0VDD7 668 aa15.6■□□□□ 0.09
SF3A1-204ENST00000447376 IL10RAQ13651 578 aa15.6■□□□□ 0.09
SF3A1-204ENST00000447376 OR4D1Q15615 310 aa15.6■□□□□ 0.09
SF3A1-204ENST00000447376 HKDC1Q2TB90 917 aa15.6■□□□□ 0.09
SF3A1-204ENST00000447376 MRPL14Q6P1L8 145 aaKnown RBP15.6■□□□□ 0.09
SF3A1-204ENST00000447376 TMPRSS11BQ86T26 416 aa15.6■□□□□ 0.09
SF3A1-204ENST00000447376 ASPGQ86U10 573 aa15.6■□□□□ 0.09
SF3A1-204ENST00000447376 ISCA2Q86U28 154 aa15.6■□□□□ 0.09
SF3A1-204ENST00000447376 LCA5Q86VQ0 697 aa15.6■□□□□ 0.09
SF3A1-204ENST00000447376 CENPLQ8N0S6 344 aaPredicted RBP15.6■□□□□ 0.09
SF3A1-204ENST00000447376 METTL27Q8N6F8 245 aaPredicted RBP15.6■□□□□ 0.09
SF3A1-204ENST00000447376 ABHD11Q8NFV4 315 aa15.6■□□□□ 0.09
SF3A1-204ENST00000447376 RHEBL1Q8TAI7 183 aa15.6■□□□□ 0.09
SF3A1-204ENST00000447376 ACMSDQ8TDX5 336 aa15.6■□□□□ 0.09
SF3A1-204ENST00000447376 SLC13A3Q8WWT9 602 aa15.6■□□□□ 0.09
SF3A1-204ENST00000447376 NEIL2Q969S2 332 aa15.6■□□□□ 0.09
SF3A1-204ENST00000447376 BBC3Q96PG8 261 aaPredicted RBP15.6■□□□□ 0.09
SF3A1-204ENST00000447376 ROPN1BQ9BZX4 212 aaPredicted RBP15.6■□□□□ 0.09
SF3A1-204ENST00000447376 ROPN1Q9HAT0 212 aaPredicted RBP15.6■□□□□ 0.09
SF3A1-204ENST00000447376 GEMIN8Q9NWZ8 242 aaKnown RBP15.6■□□□□ 0.09
SF3A1-204ENST00000447376 NUDT4Q9NZJ9 180 aa15.6■□□□□ 0.09
SF3A1-204ENST00000447376 KCNMB2Q9Y691 235 aa15.6■□□□□ 0.09
SF3A1-204ENST00000447376 MAU2Q9Y6X3 613 aa15.6■□□□□ 0.09
SF3A1-204ENST00000447376 IGSF10Q6WRI0 2623 aa15.59■□□□□ 0.09
SF3A1-204ENST00000447376 TRBC2A0A5B9 178 aa15.59■□□□□ 0.09
SF3A1-204ENST00000447376 FEZF1A0PJY2 475 aa15.59■□□□□ 0.09
SF3A1-204ENST00000447376 URADA6NGE7 173 aa15.59■□□□□ 0.09
SF3A1-204ENST00000447376 SMIM23A6NLE4 172 aa15.59■□□□□ 0.09
SF3A1-204ENST00000447376 STK16O75716 305 aa15.59■□□□□ 0.09
SF3A1-204ENST00000447376 SERPIND1P05546 499 aa15.59■□□□□ 0.09
SF3A1-204ENST00000447376 KRT15P19012 456 aa15.59■□□□□ 0.09
SF3A1-204ENST00000447376 SLCO1A2P46721 670 aa15.59■□□□□ 0.09
SF3A1-204ENST00000447376 IRF9Q00978 393 aa15.59■□□□□ 0.09
SF3A1-204ENST00000447376 CDC16Q13042 620 aa15.59■□□□□ 0.09
SF3A1-204ENST00000447376 FAM53BQ14153 422 aa15.59■□□□□ 0.09
SF3A1-204ENST00000447376 NAA30Q147X3 362 aaPredicted RBP15.59■□□□□ 0.09
SF3A1-204ENST00000447376 NIPAL1Q6NVV3 410 aa15.59■□□□□ 0.09
SF3A1-204ENST00000447376 MED25Q71SY5 747 aa15.59■□□□□ 0.09
SF3A1-204ENST00000447376 KRT78Q8N1N4 520 aa15.59■□□□□ 0.09
SF3A1-204ENST00000447376 RIBC1Q8N443 379 aaPredicted RBP15.59■□□□□ 0.09
SF3A1-204ENST00000447376 TMEM102Q8N9M5 508 aaPredicted RBP15.59■□□□□ 0.09
SF3A1-204ENST00000447376 SNX31Q8N9S9 440 aa15.59■□□□□ 0.09
SF3A1-204ENST00000447376 MFSD9Q8NBP5 474 aa15.59■□□□□ 0.09
SF3A1-204ENST00000447376 TRPV3Q8NET8 790 aa15.59■□□□□ 0.09
SF3A1-204ENST00000447376 NACC2Q96BF6 587 aa15.59■□□□□ 0.09
SF3A1-204ENST00000447376 MIEF2Q96C03 454 aa15.59■□□□□ 0.09
SF3A1-204ENST00000447376 C10orf90Q96M02 699 aa15.59■□□□□ 0.09
SF3A1-204ENST00000447376 FER1L6-AS2Q96M78 137 aa15.59■□□□□ 0.09
SF3A1-204ENST00000447376 OR4K3Q96R72 315 aa15.59■□□□□ 0.09
SF3A1-204ENST00000447376 SLC26A1Q9H2B4 701 aa15.59■□□□□ 0.09
SF3A1-204ENST00000447376 ANKHQ9HCJ1 492 aa15.59■□□□□ 0.09
SF3A1-204ENST00000447376 DNAJC11Q9NVH1 559 aa15.59■□□□□ 0.09
SF3A1-204ENST00000447376 C14orf105Q9NVL8 296 aa15.59■□□□□ 0.09
SF3A1-204ENST00000447376 GPRC5BQ9NZH0 403 aa15.59■□□□□ 0.09
SF3A1-204ENST00000447376 TMCO1Q9UM00 188 aa15.59■□□□□ 0.09
SF3A1-204ENST00000447376 SH2B3Q9UQQ2 575 aa15.59■□□□□ 0.09
SF3A1-204ENST00000447376 HEMK1Q9Y5R4 338 aaPredicted RBP15.59■□□□□ 0.09
SF3A1-204ENST00000447376 ANKRD12Q6UB98 2062 aa15.59■□□□□ 0.09
SF3A1-204ENST00000447376 TLDC2A0PJX2 215 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms