RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 CELA2AP08217 269 aa19.67■□□□□ 0.74
SDC1-205ENST00000447124 ANXA5P08758 320 aa19.67■□□□□ 0.74
SDC1-205ENST00000447124 BCL6P41182 706 aa19.67■□□□□ 0.74
SDC1-205ENST00000447124 IL2P60568 153 aa19.67■□□□□ 0.74
SDC1-205ENST00000447124 RPS15AP62244 130 aaKnown RBP19.67■□□□□ 0.74
SDC1-205ENST00000447124 MRPS25P82663 173 aaKnown RBP19.67■□□□□ 0.74
SDC1-205ENST00000447124 EEF1A2Q05639 463 aaKnown RBP19.67■□□□□ 0.74
SDC1-205ENST00000447124 NR6A1Q15406 480 aa19.67■□□□□ 0.74
SDC1-205ENST00000447124 TMEM205Q6UW68 189 aa19.67■□□□□ 0.74
SDC1-205ENST00000447124 LCTLQ6UWM7 567 aa19.67■□□□□ 0.74
SDC1-205ENST00000447124 LINC00696Q6ZRV3 163 aa19.67■□□□□ 0.74
SDC1-205ENST00000447124 ANKMY2Q8IV38 441 aa19.67■□□□□ 0.74
SDC1-205ENST00000447124 PALM2Q8IXS6 379 aa19.67■□□□□ 0.74
SDC1-205ENST00000447124 CATSPER1Q8NEC5 780 aa19.67■□□□□ 0.74
SDC1-205ENST00000447124 PPP4R1Q8TF05 950 aa19.67■□□□□ 0.74
SDC1-205ENST00000447124 LRRC39Q96DD0 335 aa19.67■□□□□ 0.74
SDC1-205ENST00000447124 RUNDC3BQ96NL0 473 aa19.67■□□□□ 0.74
SDC1-205ENST00000447124 LMF1Q96S06 567 aa19.67■□□□□ 0.74
SDC1-205ENST00000447124 TRIM31Q9BZY9 425 aa19.67■□□□□ 0.74
SDC1-205ENST00000447124 C14orf105Q9NVL8 296 aa19.67■□□□□ 0.74
SDC1-205ENST00000447124 NOVA2Q9UNW9 492 aaKnown RBP19.67■□□□□ 0.74
SDC1-205ENST00000447124 PSAT1Q9Y617 370 aa19.67■□□□□ 0.74
SDC1-205ENST00000447124 LOC102723996A0A087X1L8 192 aa19.66■□□□□ 0.74
SDC1-205ENST00000447124 IGHV1-45A0A0A0MS14 117 aa19.66■□□□□ 0.74
SDC1-205ENST00000447124 AGFG2O95081 481 aa19.66■□□□□ 0.74
SDC1-205ENST00000447124 HIST1H2AGP0C0S8 130 aaPredicted RBP19.66■□□□□ 0.74
SDC1-205ENST00000447124 CDH1P12830 882 aa19.66■□□□□ 0.74
SDC1-205ENST00000447124 GP1BBP13224 206 aa19.66■□□□□ 0.74
SDC1-205ENST00000447124 HIST1H2ADP20671 130 aa19.66■□□□□ 0.74
SDC1-205ENST00000447124 ARL4CP56559 192 aa19.66■□□□□ 0.74
SDC1-205ENST00000447124 PDAP1Q13442 181 aaKnown RBP19.66■□□□□ 0.74
SDC1-205ENST00000447124 FRG1Q14331 258 aaKnown RBP19.66■□□□□ 0.74
SDC1-205ENST00000447124 FASTKD3Q14CZ7 662 aaKnown RBP19.66■□□□□ 0.74
SDC1-205ENST00000447124 NDUFA9Q16795 377 aa19.66■□□□□ 0.74
SDC1-205ENST00000447124 IRAK1BP1Q5VVH5 260 aa19.66■□□□□ 0.74
SDC1-205ENST00000447124 TMEM214Q6NUQ4 689 aaKnown RBP19.66■□□□□ 0.74
SDC1-205ENST00000447124 ISLR2Q6UXK2 745 aa19.66■□□□□ 0.74
SDC1-205ENST00000447124 C17orf64Q86WR6 236 aa19.66■□□□□ 0.74
SDC1-205ENST00000447124 KCT2Q8NC54 265 aa19.66■□□□□ 0.74
SDC1-205ENST00000447124 OR56A3Q8NH54 315 aa19.66■□□□□ 0.74
SDC1-205ENST00000447124 PRR7Q8TB68 274 aa19.66■□□□□ 0.74
SDC1-205ENST00000447124 PYCR2Q96C36 320 aa19.66■□□□□ 0.74
SDC1-205ENST00000447124 THAP11Q96EK4 314 aa19.66■□□□□ 0.74
SDC1-205ENST00000447124 HIST1H2AHQ96KK5 128 aa19.66■□□□□ 0.74
SDC1-205ENST00000447124 OR4K3Q96R72 315 aa19.66■□□□□ 0.74
SDC1-205ENST00000447124 HIST1H2AJQ99878 128 aa19.66■□□□□ 0.74
SDC1-205ENST00000447124 H2AFJQ9BTM1 129 aa19.66■□□□□ 0.74
SDC1-205ENST00000447124 MOCS1Q9NZB8 636 aa19.66■□□□□ 0.74
SDC1-205ENST00000447124 SNX24Q9Y343 169 aa19.66■□□□□ 0.74
SDC1-205ENST00000447124 NSG1A0A0A6YYJ2 146 aa19.65■□□□□ 0.74
SDC1-205ENST00000447124 OR2W5A6NFC9 320 aa19.65■□□□□ 0.74
SDC1-205ENST00000447124 H0YIG0 161 aa19.65■□□□□ 0.74
SDC1-205ENST00000447124 CCDC188H7C350 402 aa19.65■□□□□ 0.74
SDC1-205ENST00000447124 NSA2O95478 260 aaKnown RBP19.65■□□□□ 0.74
SDC1-205ENST00000447124 PRR35P0CG20 571 aa19.65■□□□□ 0.74
SDC1-205ENST00000447124 CXCR2P25025 360 aa19.65■□□□□ 0.74
SDC1-205ENST00000447124 RPL21P46778 160 aaKnown RBP19.65■□□□□ 0.74
SDC1-205ENST00000447124 AVPR1BP47901 424 aa19.65■□□□□ 0.74
SDC1-205ENST00000447124 MFAP5Q13361 173 aa19.65■□□□□ 0.74
SDC1-205ENST00000447124 PCOLCEQ15113 449 aa19.65■□□□□ 0.74
SDC1-205ENST00000447124 DUPD1Q68J44 220 aa19.65■□□□□ 0.74
SDC1-205ENST00000447124 FAM45BPQ6NSW5 357 aa19.65■□□□□ 0.74
SDC1-205ENST00000447124 SLC26A11Q86WA9 606 aa19.65■□□□□ 0.74
SDC1-205ENST00000447124 KBTBD2Q8IY47 623 aa19.65■□□□□ 0.74
SDC1-205ENST00000447124 MFSD9Q8NBP5 474 aa19.65■□□□□ 0.74
SDC1-205ENST00000447124 ABHD11Q8NFV4 315 aa19.65■□□□□ 0.74
SDC1-205ENST00000447124 OR4K1Q8NGD4 311 aa19.65■□□□□ 0.74
SDC1-205ENST00000447124 FAM45AQ8TCE6 357 aa19.65■□□□□ 0.74
SDC1-205ENST00000447124 SNF8Q96H20 258 aa19.65■□□□□ 0.74
SDC1-205ENST00000447124 PDLIM5Q96HC4 596 aaKnown RBP19.65■□□□□ 0.74
SDC1-205ENST00000447124 KRT12Q99456 494 aa19.65■□□□□ 0.74
SDC1-205ENST00000447124 SLC29A3Q9BZD2 475 aa19.65■□□□□ 0.74
SDC1-205ENST00000447124 ARL15Q9NXU5 204 aa19.65■□□□□ 0.74
SDC1-205ENST00000447124 MKL2Q9ULH7 1088 aa19.65■□□□□ 0.74
SDC1-205ENST00000447124 NBPF19A0A087WUL8 3843 aa19.64■□□□□ 0.73
SDC1-205ENST00000447124 EFCAB8A8MWE9 144 aa19.64■□□□□ 0.73
SDC1-205ENST00000447124 E7ESA3 106 aa19.64■□□□□ 0.73
SDC1-205ENST00000447124 SGK494L7N484 410 aa19.64■□□□□ 0.73
SDC1-205ENST00000447124 SERPINA7P05543 415 aa19.64■□□□□ 0.73
SDC1-205ENST00000447124 IL1RNP18510 177 aa19.64■□□□□ 0.73
SDC1-205ENST00000447124 SOX11P35716 441 aa19.64■□□□□ 0.73
SDC1-205ENST00000447124 PAFAH1B1P43034 410 aa19.64■□□□□ 0.73
SDC1-205ENST00000447124 MEF2AQ02078 507 aaPredicted RBP19.64■□□□□ 0.73
SDC1-205ENST00000447124 MGAT5Q09328 741 aa19.64■□□□□ 0.73
SDC1-205ENST00000447124 PDIA2Q13087 525 aaKnown RBP19.64■□□□□ 0.73
SDC1-205ENST00000447124 CBLBQ13191 982 aa19.64■□□□□ 0.73
SDC1-205ENST00000447124 CAPN13Q6MZZ7 669 aaPredicted RBP19.64■□□□□ 0.73
SDC1-205ENST00000447124 ASPGQ86U10 573 aa19.64■□□□□ 0.73
SDC1-205ENST00000447124 PDSS2Q86YH6 399 aa19.64■□□□□ 0.73
SDC1-205ENST00000447124 CAMKVQ8NCB2 501 aa19.64■□□□□ 0.73
SDC1-205ENST00000447124 FBXO36Q8NEA4 188 aa19.64■□□□□ 0.73
SDC1-205ENST00000447124 BRIX1Q8TDN6 353 aaKnown RBP19.64■□□□□ 0.73
SDC1-205ENST00000447124 SLC13A3Q8WWT9 602 aa19.64■□□□□ 0.73
SDC1-205ENST00000447124 FBXL8Q96CD0 374 aa19.64■□□□□ 0.73
SDC1-205ENST00000447124 MOCOSQ96EN8 888 aa19.64■□□□□ 0.73
SDC1-205ENST00000447124 IMMP1LQ96LU5 166 aa19.64■□□□□ 0.73
SDC1-205ENST00000447124 VN1R1Q9GZP7 353 aa19.64■□□□□ 0.73
SDC1-205ENST00000447124 ZNF700Q9H0M5 742 aa19.64■□□□□ 0.73
SDC1-205ENST00000447124 LRRC4CQ9HCJ2 640 aa19.64■□□□□ 0.73
SDC1-205ENST00000447124 PLA2G3Q9NZ20 509 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms