RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 CD22P20273 847 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 PSMA3P25788 255 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 CDH12P55289 794 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 MED22Q15528 200 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 C5orf22Q49AR2 442 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 ARMCX4Q5H9R4 360 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 COX20Q5RI15 118 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 UBE2UQ5VVX9 321 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 TSEN54Q7Z6J9 526 aaKnown RBP13.74□□□□□ -0.21
ERCC3-203ENST00000445889 NXPE1Q8N323 547 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 TXNDC15Q96J42 360 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 NEK6Q9HC98 313 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 ACSL6Q9UKU0 697 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 OR6C75A6NL08 312 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 FAM47E-STBD1D6RA91 191 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 SCN2BO60939 215 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 SLC10A3P09131 477 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 AOAHP28039 575 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 CRATP43155 626 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 HNRNPFP52597 415 aaKnown RBP13.74□□□□□ -0.21
ERCC3-203ENST00000445889 ST3GAL4Q11206 333 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 GAB1Q13480 694 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 DMC1Q14565 340 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 IER5LQ5T953 404 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 FRG2Q64ET8 278 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 CCDC80Q76M96 950 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 CYP4Z2PQ8N1L4 340 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 STX19Q8N4C7 294 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 AMER2Q8N7J2 671 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 MED8Q96G25 268 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 ZNF486Q96H40 463 aaPredicted RBP13.74□□□□□ -0.21
ERCC3-203ENST00000445889 FRG2BQ96QU4 278 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 TNFRSF11BO00300 401 aa13.73□□□□□ -0.21
ERCC3-203ENST00000445889 MFN2O95140 757 aa13.73□□□□□ -0.21
ERCC3-203ENST00000445889 HIST1H2AGP0C0S8 130 aaPredicted RBP13.73□□□□□ -0.21
ERCC3-203ENST00000445889 HIST1H2ADP20671 130 aa13.73□□□□□ -0.21
ERCC3-203ENST00000445889 AZGP1P25311 298 aaKnown RBP13.73□□□□□ -0.21
ERCC3-203ENST00000445889 CASP3P42574 277 aa13.73□□□□□ -0.21
ERCC3-203ENST00000445889 KCNJ10P78508 379 aa13.73□□□□□ -0.21
ERCC3-203ENST00000445889 CDC20Q12834 499 aa13.73□□□□□ -0.21
ERCC3-203ENST00000445889 ABRQ12979 859 aa13.73□□□□□ -0.21
ERCC3-203ENST00000445889 TRIM71Q2Q1W2 868 aaKnown RBP13.73□□□□□ -0.21
ERCC3-203ENST00000445889 CCSMST1Q4G0I0 132 aa13.73□□□□□ -0.21
ERCC3-203ENST00000445889 CBLL1Q75N03 491 aa13.73□□□□□ -0.21
ERCC3-203ENST00000445889 SERPINA11Q86U17 422 aa13.73□□□□□ -0.21
ERCC3-203ENST00000445889 TCAIMQ8N3R3 496 aa13.73□□□□□ -0.21
ERCC3-203ENST00000445889 OR5AK3PQ8NH89 298 aa13.73□□□□□ -0.21
ERCC3-203ENST00000445889 HIST1H2AHQ96KK5 128 aa13.73□□□□□ -0.21
ERCC3-203ENST00000445889 C7orf34Q96L11 122 aa13.73□□□□□ -0.21
ERCC3-203ENST00000445889 DMRTB1Q96MA1 342 aa13.73□□□□□ -0.21
ERCC3-203ENST00000445889 HIST1H2AJQ99878 128 aa13.73□□□□□ -0.21
ERCC3-203ENST00000445889 H2AFJQ9BTM1 129 aa13.73□□□□□ -0.21
ERCC3-203ENST00000445889 GABARAPL1Q9H0R8 117 aa13.73□□□□□ -0.21
ERCC3-203ENST00000445889 IFT52Q9Y366 437 aa13.73□□□□□ -0.21
ERCC3-203ENST00000445889 HSPE1-MOB4S4R3N1 261 aa13.73□□□□□ -0.21
ERCC3-203ENST00000445889 VWA8A3KMH1 1905 aa13.73□□□□□ -0.21
ERCC3-203ENST00000445889 SCN10AQ9Y5Y9 1956 aa13.73□□□□□ -0.21
ERCC3-203ENST00000445889 OR2AG2A6NM03 316 aa13.73□□□□□ -0.21
ERCC3-203ENST00000445889 H3BM21 787 aa13.73□□□□□ -0.21
ERCC3-203ENST00000445889 SUV39H1O43463 412 aa13.73□□□□□ -0.21
ERCC3-203ENST00000445889 C9P02748 559 aa13.73□□□□□ -0.21
ERCC3-203ENST00000445889 ETFAP13804 333 aa13.73□□□□□ -0.21
ERCC3-203ENST00000445889 S100A1P23297 94 aa13.73□□□□□ -0.21
ERCC3-203ENST00000445889 CTSOP43234 321 aaPredicted RBP13.73□□□□□ -0.21
ERCC3-203ENST00000445889 IRF8Q02556 426 aa13.73□□□□□ -0.21
ERCC3-203ENST00000445889 FADDQ13158 208 aa13.73□□□□□ -0.21
ERCC3-203ENST00000445889 ZNF181Q2M3W8 571 aa13.73□□□□□ -0.21
ERCC3-203ENST00000445889 IQCCQ4KMZ1 466 aa13.73□□□□□ -0.21
ERCC3-203ENST00000445889 CST9Q5W186 159 aa13.73□□□□□ -0.21
ERCC3-203ENST00000445889 EIF3MQ7L2H7 374 aaKnown RBP13.73□□□□□ -0.21
ERCC3-203ENST00000445889 LILRA3Q8N6C8 439 aaPredicted RBP13.73□□□□□ -0.21
ERCC3-203ENST00000445889 RPS6KA6Q9UK32 745 aa13.73□□□□□ -0.21
ERCC3-203ENST00000445889 GABRR3A8MPY1 467 aa13.72□□□□□ -0.21
ERCC3-203ENST00000445889 RGS5O15539 181 aa13.72□□□□□ -0.21
ERCC3-203ENST00000445889 DYRK3O43781 588 aa13.72□□□□□ -0.21
ERCC3-203ENST00000445889 GCM2O75603 506 aaPredicted RBP13.72□□□□□ -0.21
ERCC3-203ENST00000445889 EOMESO95936 686 aa13.72□□□□□ -0.21
ERCC3-203ENST00000445889 PRPS2P11908 318 aa13.72□□□□□ -0.21
ERCC3-203ENST00000445889 CAP1Q01518 475 aa13.72□□□□□ -0.21
ERCC3-203ENST00000445889 ELP6Q0PNE2 266 aa13.72□□□□□ -0.21
ERCC3-203ENST00000445889 CRHR2Q13324 411 aa13.72□□□□□ -0.21
ERCC3-203ENST00000445889 XKR6Q5GH73 641 aa13.72□□□□□ -0.21
ERCC3-203ENST00000445889 NXNL2Q5VZ03 156 aa13.72□□□□□ -0.21
ERCC3-203ENST00000445889 TXNDC8Q6A555 127 aa13.72□□□□□ -0.21
ERCC3-203ENST00000445889 LACC1Q8IV20 430 aa13.72□□□□□ -0.21
ERCC3-203ENST00000445889 UBE2J2Q8N2K1 259 aa13.72□□□□□ -0.21
ERCC3-203ENST00000445889 ARL14EPQ8N8R7 260 aaPredicted RBP13.72□□□□□ -0.21
ERCC3-203ENST00000445889 DBF4BQ8NFT6 615 aa13.72□□□□□ -0.21
ERCC3-203ENST00000445889 VANGL1Q8TAA9 524 aaPredicted RBP13.72□□□□□ -0.21
ERCC3-203ENST00000445889 IPCEF1Q8WWN9 437 aaPredicted RBP13.72□□□□□ -0.21
ERCC3-203ENST00000445889 SCAMP4Q969E2 229 aa13.72□□□□□ -0.21
ERCC3-203ENST00000445889 SPATA17Q96L03 361 aa13.72□□□□□ -0.21
ERCC3-203ENST00000445889 EXOSC4Q9NPD3 245 aaKnown RBP13.72□□□□□ -0.21
ERCC3-203ENST00000445889 DDX28Q9NUL7 540 aaKnown RBP13.72□□□□□ -0.21
ERCC3-203ENST00000445889 MS4A12Q9NXJ0 267 aa13.72□□□□□ -0.21
ERCC3-203ENST00000445889 PSORS1C1Q9UIG5 152 aa13.72□□□□□ -0.21
ERCC3-203ENST00000445889 PLXNA4Q9HCM2 1894 aa13.72□□□□□ -0.21
ERCC3-203ENST00000445889 KCNE1BA0A087WTH5 132 aa13.72□□□□□ -0.21
ERCC3-203ENST00000445889 SMIM30A4D0T7 59 aa13.72□□□□□ -0.21
ERCC3-203ENST00000445889 ISPDA4D126 451 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms