RNA–Protein interactions for RNA: ENST00000445609.6

NPHP1-207, Transcript of nephrocystin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP1, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-207ENST00000445609 FCRL6Q6DN72 434 aa9.13□□□□□ -0.95
NPHP1-207ENST00000445609 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.13□□□□□ -0.95
NPHP1-207ENST00000445609 RNF175Q8N4F7 328 aa9.13□□□□□ -0.95
NPHP1-207ENST00000445609 BAHD1Q8TBE0 780 aaPredicted RBP9.13□□□□□ -0.95
NPHP1-207ENST00000445609 PPP3R2Q96LZ3 170 aa9.13□□□□□ -0.95
NPHP1-207ENST00000445609 TGM7Q96PF1 710 aa9.13□□□□□ -0.95
NPHP1-207ENST00000445609 LRRC37BQ96QE4 947 aa9.13□□□□□ -0.95
NPHP1-207ENST00000445609 CD180Q99467 661 aa9.13□□□□□ -0.95
NPHP1-207ENST00000445609 EDEM2Q9BV94 578 aa9.13□□□□□ -0.95
NPHP1-207ENST00000445609 KLHL25Q9H0H3 589 aa9.13□□□□□ -0.95
NPHP1-207ENST00000445609 TP53BP1Q12888 1972 aaPredicted RBP9.13□□□□□ -0.95
NPHP1-207ENST00000445609 DNAH14Q0VDD8 3507 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 UBDO15205 165 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 RSL1D1O76021 490 aaKnown RBP9.12□□□□□ -0.95
NPHP1-207ENST00000445609 SERPINA6P08185 405 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 PRR35P0CG20 571 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 NCF2P19878 526 aaPredicted RBP9.12□□□□□ -0.95
NPHP1-207ENST00000445609 PTX3P26022 381 aaPredicted RBP9.12□□□□□ -0.95
NPHP1-207ENST00000445609 GSTM2P28161 218 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 AHRP35869 848 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 BCL6P41182 706 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 GFERP55789 205 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 RPS15AP62244 130 aaKnown RBP9.12□□□□□ -0.95
NPHP1-207ENST00000445609 RPS13P62277 151 aaKnown RBP9.12□□□□□ -0.95
NPHP1-207ENST00000445609 SQSTM1Q13501 440 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 GALNTL6Q49A17 601 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 C6orf136Q5SQH8 315 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 PERM1Q5SV97 790 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 OGFOD2Q6N063 350 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 FBXO42Q6P3S6 717 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 WDR74Q6RFH5 385 aaPredicted RBP9.12□□□□□ -0.95
NPHP1-207ENST00000445609 FAM92BQ6ZTR7 304 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 USP53Q70EK8 1073 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 VN1R5Q7Z5H4 357 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 RHBDD1Q8TEB9 315 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 TRAPPC9Q96Q05 1148 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 MAP3K3Q99759 626 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 CCDC3Q9BQI4 270 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 ZMYND15Q9H091 742 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 LRTM1Q9HBL6 345 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 TMEM9BQ9NQ34 198 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 DMRT3Q9NQL9 472 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 RXFP3Q9NSD7 469 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 NMRK1Q9NWW6 199 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 VPS29Q9UBQ0 182 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 GIMAP2Q9UG22 337 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 ZFP69BQ9UJL9 534 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 PPT2Q9UMR5 302 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 SLC12A4Q9UP95 1085 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 CABIN1Q9Y6J0 2220 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 TLCD2A6NGC4 264 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 NPIPB8E9PQR5 432 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 SEC22BO75396 215 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 LDOC1O95751 146 aaPredicted RBP9.12□□□□□ -0.95
NPHP1-207ENST00000445609 TGFB1P01137 390 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 ST6GAL1P15907 406 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 CFHR1Q03591 330 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 TMEM198Q66K66 360 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 PRR23CQ6ZRP0 262 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 CHSY3Q70JA7 882 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 SPATA19Q7Z5L4 167 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 CARFQ8N187 725 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 FNDC5Q8NAU1 212 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 MFSD9Q8NBP5 474 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 TRPV3Q8NET8 790 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 IFI44Q8TCB0 444 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 THAP11Q96EK4 314 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 CMTM7Q96FZ5 175 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 CNDP2Q96KP4 475 aaKnown RBP9.12□□□□□ -0.95
NPHP1-207ENST00000445609 SERPINI1Q99574 410 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 NMUR2Q9GZQ4 415 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 C1orf109Q9NX04 203 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 PILRAQ9UKJ1 303 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 PCDHGA4Q9Y5G9 962 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 AP1M2Q9Y6Q5 423 aa9.12□□□□□ -0.95
NPHP1-207ENST00000445609 SLC9B1P1A6NJY1 282 aa9.11□□□□□ -0.95
NPHP1-207ENST00000445609 FCHO1O14526 889 aa9.11□□□□□ -0.95
NPHP1-207ENST00000445609 KIF1CO43896 1103 aaKnown RBP9.11□□□□□ -0.95
NPHP1-207ENST00000445609 CTSVO60911 334 aa9.11□□□□□ -0.95
NPHP1-207ENST00000445609 CLEC3AO75596 197 aa9.11□□□□□ -0.95
NPHP1-207ENST00000445609 SLC34A2O95436 690 aa9.11□□□□□ -0.95
NPHP1-207ENST00000445609 CD59P13987 128 aa9.11□□□□□ -0.95
NPHP1-207ENST00000445609 HOXB3P14651 431 aaPredicted RBP9.11□□□□□ -0.95
NPHP1-207ENST00000445609 CKMT2P17540 419 aa9.11□□□□□ -0.95
NPHP1-207ENST00000445609 PRPH2P23942 346 aa9.11□□□□□ -0.95
NPHP1-207ENST00000445609 ERVK-8P63133 956 aa9.11□□□□□ -0.95
NPHP1-207ENST00000445609 CYP4F2P78329 520 aa9.11□□□□□ -0.95
NPHP1-207ENST00000445609 EMX2Q04743 252 aa9.11□□□□□ -0.95
NPHP1-207ENST00000445609 CYP4F3Q08477 520 aa9.11□□□□□ -0.95
NPHP1-207ENST00000445609 ZIC1Q15915 447 aa9.11□□□□□ -0.95
NPHP1-207ENST00000445609 SMU1Q2TAY7 513 aa9.11□□□□□ -0.95
NPHP1-207ENST00000445609 RFTN2Q52LD8 501 aaPredicted RBP9.11□□□□□ -0.95
NPHP1-207ENST00000445609 ZFAND4Q86XD8 727 aa9.11□□□□□ -0.95
NPHP1-207ENST00000445609 FITM2Q8N6M3 262 aa9.11□□□□□ -0.95
NPHP1-207ENST00000445609 C19orf47Q8N9M1 422 aaKnown RBP9.11□□□□□ -0.95
NPHP1-207ENST00000445609 TCTN2Q96GX1 697 aa9.11□□□□□ -0.95
NPHP1-207ENST00000445609 METTL2AQ96IZ6 378 aaKnown RBP9.11□□□□□ -0.95
NPHP1-207ENST00000445609 ZFYVE21Q9BQ24 234 aa9.11□□□□□ -0.95
NPHP1-207ENST00000445609 PARD6AQ9NPB6 346 aa9.11□□□□□ -0.95
NPHP1-207ENST00000445609 SAR1AQ9NR31 198 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms